FFCP PHASE1:Hg19::chr16:87339790..87339804,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:87339790..87339804,- | |||
|description=CAGE_peak_at_chr16:87339790..87339804,- | |||
|id=chr16:87339790..87339804,- | |||
|ontology_enrichment_celltype=CL:0000055!2.50e-16!180;CL:0002620!1.49e-14!23;CL:0000057!3.83e-13!75;CL:0002556!3.68e-11!6 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.35e-12;10!CL:0002556;1.59e-11;6!CL:0000147;9.34e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.16e-12,10;CL:0000541,3.16e-12,10;CL:0002556,1.37e-11,6;CL:0000333,4.08e-10,41;CL:0000147,8.97e-09,14;CL:0000133,8.34e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.75e-08!5;DOID:450!4.75e-08!5;DOID:66!4.75e-08!5;DOID:423!4.75e-08!5;DOID:0080000!4.75e-08!5;DOID:11722!4.75e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.49e-16!95;UBERON:0002097!1.52e-14!40;UBERON:0002199!1.59e-13!45;UBERON:0002416!1.59e-13!45;UBERON:0001758!3.68e-11!6;UBERON:0003672!3.68e-11!6;UBERON:0000475!9.11e-10!365;UBERON:0003129!9.77e-10!11;UBERON:0000914!2.26e-08!83;UBERON:0002329!2.26e-08!83;UBERON:0003077!2.26e-08!83;UBERON:0003059!2.26e-08!83;UBERON:0007282!2.26e-08!83;UBERON:0009618!2.26e-08!83;UBERON:0007285!2.26e-08!83;UBERON:0000075!5.73e-08!13;UBERON:0005944!5.73e-08!13;UBERON:0004288!5.73e-08!13;UBERON:0003089!5.73e-08!13;UBERON:0005256!4.56e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.59e-11;6!UBERON:0003672;1.59e-11;6!UBERON:0003129;5.92e-10;7!UBERON:0003891;1.95e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,1.37e-11,6;UBERON:0003672,1.37e-11,6;UBERON:0003129,5.24e-10,7;UBERON:0003891,2.99e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,2.21101771161182,0,0,0.989067717114227,0,0,0.841680569770331,0.375355559615893,0.831192346452549,1.75591048352335,1.5324389789951,1.05166641234618,0,2.15267562826634,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.675105328965065,0.292311015483596,0.504867548488229,0,0,0.355009592516614,0.403008392910561,2.20428770003634,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0,0,0.766765358330422,0,0,0,0,0,0.380987365753014,0.381988425558278,1.17217447210047,0,2.36503233217644,2.40274446275134,1.42913216315289,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.714889968290738,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.892144943985809,0.630809660135739,0,0,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0.348631135379878,0,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0,0,0,0,1.07923474549989,0.54907405947211,0.706874414074119,0,0,0,0.975267478179181,0,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,3.12549761487054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0.295547618953547,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,1.39866726707491,0,0,0,0,0,0,2.31037150325144,2.40586546518366,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,1.21319294033318,0.285465333544967,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0.466311601748341,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0.97894681802587,0,0,0,0,0,0,0,1.38172136692479,0,0.276516872303462,0,0,0,1.96565909307848,0,0,0,0,0,1.13503190713367,0,0,0,0,0.646948868380091,0,0,0,1.48802444071178,0.247871528518004,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,3.97832444232549,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:87339790..87339804,- | |||
}} |
Latest revision as of 13:09, 25 July 2015
Short description: | p@chr16:87339790..87339804, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87339790..87339804, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.16e-12 | 10 |
melanoblast | 3.16e-12 | 10 |
fibroblast of periodontium | 1.37e-11 | 6 |
migratory neural crest cell | 4.08e-10 | 41 |
pigment cell | 8.97e-09 | 14 |
neurectodermal cell | 8.34e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
periodontium | 1.37e-11 | 6 |
dentition | 1.37e-11 | 6 |
skull | 5.24e-10 | 7 |
stroma | 2.99e-08 | 4 |