FFCP PHASE1:Hg19::chr17:17485716..17485730,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBM1 | |||
|association_with_transcript=14bp_to_ENST00000395783,NM_007169,uc002grk.2_5end | |||
|cluster_id=chr17:17485716..17485730,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_PEMT_5end | |||
|id=chr17:17485716..17485730,- | |||
|ontology_enrichment_celltype=CL:0000181!2.15e-31!12;CL:0000417!2.15e-31!12;CL:0000668!2.15e-31!12;CL:0000414!2.15e-31!12;CL:0000412!2.15e-31!12;CL:0000182!2.15e-31!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.50e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.50e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.03e-10;11!UBERON:0009497;1.04e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.85e-35!19;UBERON:0006925!5.85e-35!19;UBERON:0008836!5.85e-35!19;UBERON:0005057!6.62e-32!26;UBERON:0008835!4.38e-30!22;UBERON:0003894!4.38e-30!22;UBERON:0009854!9.64e-29!23;UBERON:0007499!2.23e-26!25;UBERON:0009497!2.23e-26!25;UBERON:0000015!2.23e-26!25;UBERON:0002423!2.23e-26!25;UBERON:0006235!2.23e-26!25;UBERON:0004161!2.23e-26!25;UBERON:0009856!2.48e-25!26;UBERON:0002368!2.20e-23!35;UBERON:0002365!4.13e-21!31;UBERON:0002330!4.13e-21!31;UBERON:0000949!6.07e-18!45;UBERON:0005172!7.51e-18!55;UBERON:0005173!7.51e-18!55;UBERON:0002417!5.80e-16!61;UBERON:0000916!5.80e-16!61;UBERON:0003929!9.16e-15!54;UBERON:0002530!2.04e-13!59;UBERON:0005911!2.53e-09!82;UBERON:0005177!1.68e-08!107;UBERON:0009569!5.64e-08!113;UBERON:0002405!9.63e-08!115;UBERON:0001041!1.27e-07!98;UBERON:0000077!9.15e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.62e-33;19!UBERON:0006925;8.62e-33;19!UBERON:0002423;4.98e-25;25!UBERON:0002365;3.36e-20;31!UBERON:0002330;3.36e-20;31!UBERON:0002368;1.83e-17;33!UBERON:0000949;1.11e-12;43!UBERON:0005172;3.55e-09;52!UBERON:0005173;3.55e-09;52!UBERON:0002417;3.98e-07;58!UBERON:0000916;3.98e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.62e-33,19;UBERON:0006925,8.62e-33,19;UBERON:0008836,8.62e-33,19;UBERON:0008835,2.20e-28,22;UBERON:0003894,2.20e-28,22;UBERON:0009854,3.61e-27,23;UBERON:0007499,4.98e-25,25;UBERON:0009497,4.98e-25,25;UBERON:0000015,4.98e-25,25;UBERON:0002423,4.98e-25,25;UBERON:0006235,4.98e-25,25;UBERON:0004161,4.98e-25,25;UBERON:0009856,4.40e-24,26;UBERON:0002365,2.91e-20,31;UBERON:0002330,2.91e-20,31;UBERON:0002368,5.48e-18,35;UBERON:0000949,4.63e-14,45;UBERON:0003929,9.21e-12,54;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0002530,8.72e-11,59;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0005911,8.19e-08,82;UBERON:0001041,2.26e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3510069643662,22.6050259835854,33.0842347741586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.5119501099418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0674542563371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.709048640765013,0.576911008668165,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,56.7157144334179,37.101928895422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PEMT | |||
}} |
Latest revision as of 21:43, 18 September 2015
Short description: | p8@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PEMT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 14bp_to_ENST00000395783, NM_007169, uc002grk.2_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.50e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.62e-33 | 19 |
digestive gland | 8.62e-33 | 19 |
liver bud | 8.62e-33 | 19 |
hepatic diverticulum | 2.20e-28 | 22 |
liver primordium | 2.20e-28 | 22 |
digestive tract diverticulum | 3.61e-27 | 23 |
epithelial sac | 4.98e-25 | 25 |
epithelium of foregut-midgut junction | 4.98e-25 | 25 |
anatomical boundary | 4.98e-25 | 25 |
hepatobiliary system | 4.98e-25 | 25 |
foregut-midgut junction | 4.98e-25 | 25 |
septum transversum | 4.98e-25 | 25 |
sac | 4.40e-24 | 26 |
exocrine gland | 2.91e-20 | 31 |
exocrine system | 2.91e-20 | 31 |
endocrine gland | 5.48e-18 | 35 |
endocrine system | 4.63e-14 | 45 |
gut epithelium | 9.21e-12 | 54 |
abdomen element | 9.21e-12 | 54 |
abdominal segment element | 9.21e-12 | 54 |
gland | 8.72e-11 | 59 |
abdominal segment of trunk | 1.31e-10 | 60 |
abdomen | 1.31e-10 | 60 |
endo-epithelium | 8.19e-08 | 82 |
foregut | 2.26e-07 | 87 |