FFCP PHASE1:Hg19::chr18:42260920..42260951,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15573 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y6X0 | |||
|association_with_transcript=57bp_to_ENST00000282030,NM_015559,uc010dni.2_5end | |||
|cluster_id=chr18:42260920..42260951,+ | |||
|coexpression_cluster_id=C3720 | |||
|description=CAGE_peak_4_at_SETBP1_5end | |||
|id=chr18:42260920..42260951,+ | |||
|ontology_enrichment_celltype=CL:0000236!2.15e-08!14;CL:0000945!9.39e-08!24;CL:0000826!9.39e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.41e-15;13!CL:0000945;2.58e-14;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.04e-16,14;CL:0000945,1.34e-14,24;CL:0000826,1.34e-14,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-35!115;UBERON:0001017!1.26e-20!82;UBERON:0000073!8.39e-20!94;UBERON:0001016!8.39e-20!94;UBERON:0005743!1.22e-19!86;UBERON:0004121!3.19e-18!169;UBERON:0001049!6.37e-18!57;UBERON:0005068!6.37e-18!57;UBERON:0006241!6.37e-18!57;UBERON:0007135!6.37e-18!57;UBERON:0002616!8.72e-18!59;UBERON:0000924!5.61e-17!173;UBERON:0006601!5.61e-17!173;UBERON:0000955!8.74e-17!69;UBERON:0006238!8.74e-17!69;UBERON:0000153!1.04e-15!129;UBERON:0007811!1.04e-15!129;UBERON:0000033!6.12e-15!123;UBERON:0003075!5.17e-14!86;UBERON:0007284!5.17e-14!86;UBERON:0003080!3.90e-13!42;UBERON:0001893!7.26e-13!34;UBERON:0002780!1.24e-12!41;UBERON:0001890!1.24e-12!41;UBERON:0006240!1.24e-12!41;UBERON:0001869!1.37e-12!32;UBERON:0002346!1.85e-12!90;UBERON:0002020!2.43e-12!34;UBERON:0003528!2.43e-12!34;UBERON:0002791!2.56e-12!33;UBERON:0000956!2.09e-11!25;UBERON:0000203!2.09e-11!25;UBERON:0001950!6.12e-10!20;UBERON:0003056!1.09e-09!61;UBERON:0002619!3.22e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.25e-08;32!UBERON:0000956;1.50e-07;25!UBERON:0000203;1.50e-07;25!UBERON:0002037;7.91e-07;6!UBERON:0001893;8.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.49e-24,114;UBERON:0001016,3.10e-12,89;UBERON:0001017,1.41e-11,81;UBERON:0001049,3.56e-08,56;UBERON:0005068,3.56e-08,56;UBERON:0006241,3.56e-08,56;UBERON:0007135,3.56e-08,56;UBERON:0001869,3.83e-08,32;UBERON:0000073,4.90e-08,53;UBERON:0002616,4.90e-08,53;UBERON:0004121,6.70e-08,171;UBERON:0000924,6.70e-08,171;UBERON:0006601,6.70e-08,171;UBERON:0000956,1.72e-07,25;UBERON:0000203,1.72e-07,25;UBERON:0003075,1.74e-07,82;UBERON:0007284,1.74e-07,82;UBERON:0001893,1.89e-07,34;UBERON:0010371,2.93e-07,104;UBERON:0002791,4.66e-07,32;UBERON:0011216,4.96e-07,223;UBERON:0000955,5.46e-07,68;UBERON:0006238,5.46e-07,68;UBERON:0002346,7.98e-07,86 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,1.10808952269109,0,1.56727360739044,9.44578757532487,5.06435372769671,4.89616294419731,1.75750833220288,2.38091709404843,2.44003422072406,0,0.383829398097213,0,0,0.6024118375565,0,0,0.142169232487422,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,7.03984977845291,3.82297027883492,1.77901850772711,4.69403244823158,4.00395987036012,5.17277195959035,3.96626923670917,2.86216126360609,5.12291672198504,8.22132065119314,6.49864487812889,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0,0.795285947051099,0.486634870302636,1.89069634328136,1.33037638477538,1.40535657109002,2.29213382120997,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,2.11900398702904,1.15235184896,0.468642863667593,0,0,0,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0.505008341862199,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.85422955527427,1.27159140695737,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0.389748020644795,0,1.19664868234989,0.80823028409406,0.355009592516614,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.439001141634502,0,1.80952150340936,0.0925884451585296,0,0,0,0.811512834825538,0.234817388471643,0,0,0,0,0,0,0,0,0,0.671928512795438,0.567100388969546,1.16426079513703,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,1.10007428731425,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,1.07813787429759,0.77005821767849,15.7538667017927,11.712586847186,4.63973287666617,5.69555302136786,7.65526501983796,0,0,0,0.49076596687656,0,0,1.03985430765404,0.178428988797162,0.315404830067869,0.702848489956279,0.902838299183157,0,3.10419213877515,0,0,0.347534457872331,1.17480694477644,0.686286847621712,1.03384013061444,0,0.426910231213777,0.606255142892519,0,0,0,1.99500565274481,0.841980283299221,0.256278298511402,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0.120859449591622,1.40354529212299,0,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0.193341436584244,0.462145851343933,0,0,0.859361958946189,0.435050081742686,0.0852266274161009,0.623224249527161,0.495854746082934,1.92190067365106,7.40153732468588,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0.86101074534246,0,0.886860307073351,2.29723400206959,1.52234282769651,1.52927441428475,0,0.238231775457789,1.23408681925858,1.29694662238543,0.540031437238115,0,0,0,0.245040215981032,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,2.98244294329889,0.562677665642051,1.33570446027487,0,2.11125408127993,1.39473591775749,4.97311047956066,0,0,0,0,0,0,0,3.55116260292961,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0,1.48681999993533,1.44999915086959,0.341380344856499,0,0,0.344743373241465,0,0.868124974666461,0,1.08536794762867,6.10326945268333,3.20679853800551,5.02430952221031,1.53569778007781,0,0,6.84857300683794,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4768118060935,2.4441205797345,0,0,0,0.606610196826093,0.802577647298789,0.468528891450678,0,0,0,3.15667522279512,1.20990716048664,6.73360075587078,9.66754668315866,0.60129367765797,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0.489961987071888,0,4.54289337429278,0,0,0,0,1.35784623083787,3.88326957442601,1.35588444468319,0,0,1.39283751102933,0,0.0801588202515337,1.92107695265417,0,0,0,2.57392496792947,0,0,0,0,0,0.305994652908965,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,1.3749625440701,0.717873024576814,0.399358000997982,0,0,0.134366944973453,0,0,0,0,0,0.196854963029498,1.69346664131569,0,0.272406812223151,0,0,0,0,0,1.64023802976667,0.335434687599266,2.67939404817274,6.50436892873976,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.439656701034247,0,0.775697738169303,0.13223260174269,0,0,1.38823636338003,0.628817220398664,1.24271716604159,2.97699613087171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| |||
|short_description=p4@SETBP1 | |||
}} |
Latest revision as of 14:06, 19 September 2015
Short description: | p4@SETBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SETBP1_5end |
Coexpression cluster: | C3720_Neural_duodenum_parietal_dura_Small_Astrocyte_temporal |
Association with transcript: | 57bp_to_ENST00000282030, NM_015559, uc010dni.2_5end |
EntrezGene: | SETBP1 |
HGNC: | 15573 |
UniProt: | Q9Y6X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.04e-16 | 14 |
lymphocyte of B lineage | 1.34e-14 | 24 |
pro-B cell | 1.34e-14 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.49e-24 | 114 |
nervous system | 3.10e-12 | 89 |
central nervous system | 1.41e-11 | 81 |
neural tube | 3.56e-08 | 56 |
neural rod | 3.56e-08 | 56 |
future spinal cord | 3.56e-08 | 56 |
neural keel | 3.56e-08 | 56 |
cerebral hemisphere | 3.83e-08 | 32 |
regional part of nervous system | 4.90e-08 | 53 |
regional part of brain | 4.90e-08 | 53 |
ectoderm-derived structure | 6.70e-08 | 171 |
ectoderm | 6.70e-08 | 171 |
presumptive ectoderm | 6.70e-08 | 171 |
cerebral cortex | 1.72e-07 | 25 |
pallium | 1.72e-07 | 25 |
neural plate | 1.74e-07 | 82 |
presumptive neural plate | 1.74e-07 | 82 |
telencephalon | 1.89e-07 | 34 |
ecto-epithelium | 2.93e-07 | 104 |
regional part of telencephalon | 4.66e-07 | 32 |
organ system subdivision | 4.96e-07 | 223 |
brain | 5.46e-07 | 68 |
future brain | 5.46e-07 | 68 |
neurectoderm | 7.98e-07 | 86 |