FFCP PHASE1:Hg19::chr18:43304110..43304121,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6563 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10918 | |||
|TSSclassifier=strong | |||
|UniProt=Q13336,G0W2N5 | |||
|association_with_transcript=18bp_to_ENST00000321925,ENST00000415427,NM_001128588,NM_001146036,NM_015865,uc002lbf.3,uc002lbg.3,uc002lbh.3,uc002lbi.3,uc010dnk.2,uc010xcn.1,uc010xco.1_5end | |||
|cluster_id=chr18:43304110..43304121,+ | |||
|description=CAGE_peak_2_at_SLC14A1_5end | |||
|id=chr18:43304110..43304121,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.74e-10!180;CL:0000680!3.50e-10!57;CL:0000056!3.50e-10!57;CL:0000355!3.50e-10!57;CL:0000192!4.87e-10!42;CL:0000514!4.87e-10!42;CL:0000187!3.29e-09!54;CL:0000359!3.38e-09!32;CL:0000183!1.52e-08!59;CL:0000393!3.31e-07!60;CL:0000211!3.31e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-10;32!CL:0000192;1.63e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.39e-11,32;CL:0000192,1.90e-09,43;CL:0000514,1.90e-09,43;CL:0000187,1.59e-07,55;CL:0000680,1.85e-07,58;CL:0000056,1.85e-07,58;CL:0000355,1.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.63e-07;43!UBERON:0006601;5.28e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.42e-29!115;UBERON:0001049!1.62e-28!57;UBERON:0005068!1.62e-28!57;UBERON:0006241!1.62e-28!57;UBERON:0007135!1.62e-28!57;UBERON:0002616!1.86e-24!59;UBERON:0002780!5.23e-22!41;UBERON:0001890!5.23e-22!41;UBERON:0006240!5.23e-22!41;UBERON:0000955!1.06e-21!69;UBERON:0006238!1.06e-21!69;UBERON:0003080!4.04e-21!42;UBERON:0002020!1.22e-20!34;UBERON:0003528!1.22e-20!34;UBERON:0001893!1.44e-20!34;UBERON:0001017!5.25e-20!82;UBERON:0002791!6.78e-20!33;UBERON:0001869!6.83e-19!32;UBERON:0005743!1.05e-18!86;UBERON:0003075!4.21e-18!86;UBERON:0007284!4.21e-18!86;UBERON:0002346!3.20e-17!90;UBERON:0000025!1.38e-16!194;UBERON:0000477!1.92e-16!286;UBERON:0000073!4.72e-16!94;UBERON:0001016!4.72e-16!94;UBERON:0004111!5.54e-16!241;UBERON:0002619!1.21e-15!22;UBERON:0001950!6.95e-14!20;UBERON:0000956!1.10e-13!25;UBERON:0000203!1.10e-13!25;UBERON:0000483!1.76e-13!309;UBERON:0000033!2.17e-13!123;UBERON:0000153!2.36e-13!129;UBERON:0007811!2.36e-13!129;UBERON:0000119!5.71e-13!312;UBERON:0000475!1.27e-11!365;UBERON:0000914!1.97e-11!83;UBERON:0002329!1.97e-11!83;UBERON:0003077!1.97e-11!83;UBERON:0003059!1.97e-11!83;UBERON:0007282!1.97e-11!83;UBERON:0009618!1.97e-11!83;UBERON:0007285!1.97e-11!83;UBERON:0000481!2.71e-11!347;UBERON:0003056!2.81e-11!61;UBERON:0002050!2.20e-10!605;UBERON:0005423!2.20e-10!605;UBERON:0000922!2.68e-10!612;UBERON:0000468!3.25e-10!659;UBERON:0000923!4.54e-10!604;UBERON:0005291!4.54e-10!604;UBERON:0006598!4.54e-10!604;UBERON:0002532!4.54e-10!604;UBERON:0002385!1.85e-09!63;UBERON:0001015!1.85e-09!63;UBERON:0000383!1.85e-09!63;UBERON:0001134!2.17e-09!61;UBERON:0002036!2.17e-09!61;UBERON:0003082!2.17e-09!61;UBERON:0000486!3.39e-09!82;UBERON:0004121!3.79e-09!169;UBERON:0004290!4.57e-09!70;UBERON:0001637!5.65e-09!42;UBERON:0003509!5.65e-09!42;UBERON:0004572!5.65e-09!42;UBERON:0000924!6.85e-09!173;UBERON:0006601!6.85e-09!173;UBERON:0002420!8.84e-09!9;UBERON:0007245!8.84e-09!9;UBERON:0010009!8.84e-09!9;UBERON:0010011!8.84e-09!9;UBERON:0000454!8.84e-09!9;UBERON:0002308!1.05e-08!9;UBERON:0000125!1.05e-08!9;UBERON:0003076!1.60e-08!15;UBERON:0003057!1.60e-08!15;UBERON:0000467!3.22e-08!625;UBERON:0000480!4.12e-08!626;UBERON:0004573!1.02e-07!33;UBERON:0004571!1.02e-07!33;UBERON:0009663!4.26e-07!7;UBERON:0005256!6.50e-07!143;UBERON:0001871!6.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.42e-22;34!UBERON:0003528;1.38e-21;34!UBERON:0002020;1.38e-21;34!UBERON:0002791;4.04e-21;32!UBERON:0001869;5.97e-21;32!UBERON:0002780;2.41e-20;41!UBERON:0001890;2.41e-20;41!UBERON:0002619;4.43e-19;22!UBERON:0000073;1.86e-18;53!UBERON:0002616;1.86e-18;53!UBERON:0001950;1.20e-16;20!UBERON:0000956;4.50e-16;25!UBERON:0000203;4.50e-16;25!UBERON:0001017;1.80e-12;75!UBERON:0002420;9.00e-12;9!UBERON:0007245;9.00e-12;9!UBERON:0010009;9.00e-12;9!UBERON:0010011;9.00e-12;9!UBERON:0000454;9.00e-12;9!UBERON:0000125;1.16e-11;9!UBERON:0002308;1.16e-11;9!UBERON:0000955;8.88e-11;68!UBERON:0009663;2.17e-09;7!UBERON:0004573;5.24e-09;33!UBERON:0004571;5.24e-09;33!UBERON:0007023;9.19e-09;114!UBERON:0001637;2.20e-08;42!UBERON:0003509;2.20e-08;42!UBERON:0004572;2.20e-08;42!UBERON:0000200;2.41e-08;6!UBERON:0002298;2.48e-08;6!UBERON:0001016;4.06e-08;83!UBERON:0000349;1.71e-07;5!UBERON:0004733;1.89e-07;12!UBERON:0002028;1.89e-07;12!UBERON:0000075;6.15e-07;16!UBERON:0011135;6.54e-07;5!UBERON:0002216;6.54e-07;5!UBERON:0011134;6.54e-07;5!UBERON:0002209;6.54e-07;5!UBERON:0002213;6.54e-07;5!UBERON:0007844;6.54e-07;5!UBERON:0011138;6.54e-07;5!UBERON:0001130;6.54e-07;5!UBERON:0001066;6.54e-07;5!UBERON:0001468;6.54e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.87e-38,56;UBERON:0005068,5.87e-38,56;UBERON:0006241,5.87e-38,56;UBERON:0007135,5.87e-38,56;UBERON:0000073,1.52e-34,53;UBERON:0002616,1.52e-34,53;UBERON:0007023,4.78e-33,114;UBERON:0002780,2.69e-28,41;UBERON:0001890,2.69e-28,41;UBERON:0003080,2.69e-28,41;UBERON:0006240,2.69e-28,41;UBERON:0000955,3.99e-27,68;UBERON:0006238,3.99e-27,68;UBERON:0003528,1.05e-25,34;UBERON:0002020,1.05e-25,34;UBERON:0001017,1.10e-25,81;UBERON:0001893,1.32e-25,34;UBERON:0003075,1.66e-24,82;UBERON:0007284,1.66e-24,82;UBERON:0002346,1.06e-23,86;UBERON:0002791,1.75e-23,32;UBERON:0001869,2.83e-23,32;UBERON:0001016,1.67e-21,89;UBERON:0000025,2.74e-21,192;UBERON:0004111,6.77e-21,240;UBERON:0002619,4.62e-19,22;UBERON:0010314,6.68e-19,132;UBERON:0001950,1.28e-16,20;UBERON:0000956,4.66e-16,25;UBERON:0000203,4.66e-16,25;UBERON:0010371,5.63e-16,104;UBERON:0003056,2.52e-15,61;UBERON:0004121,4.16e-12,171;UBERON:0000924,4.16e-12,171;UBERON:0006601,4.16e-12,171;UBERON:0002420,7.68e-12,9;UBERON:0007245,7.68e-12,9;UBERON:0010009,7.68e-12,9;UBERON:0010011,7.68e-12,9;UBERON:0000454,7.68e-12,9;UBERON:0001637,8.70e-12,42;UBERON:0003509,8.70e-12,42;UBERON:0004572,8.70e-12,42;UBERON:0000125,9.80e-12,9;UBERON:0002308,9.80e-12,9;UBERON:0002050,4.38e-11,564;UBERON:0000923,5.66e-11,560;UBERON:0010316,5.66e-11,560;UBERON:0005291,5.66e-11,560;UBERON:0006598,5.66e-11,560;UBERON:0010317,5.66e-11,560;UBERON:0002532,5.66e-11,560;UBERON:0000483,6.47e-11,306;UBERON:0003076,1.27e-10,15;UBERON:0003057,1.27e-10,15;UBERON:0000119,1.41e-10,309;UBERON:0004573,3.45e-10,33;UBERON:0004571,3.45e-10,33;UBERON:0011216,3.60e-10,223;UBERON:0005423,1.18e-09,581;UBERON:0009663,1.89e-09,7;UBERON:0000922,8.78e-09,592;UBERON:0002298,2.06e-08,6;UBERON:0000200,2.43e-08,6;UBERON:0007500,9.73e-08,59;UBERON:0001981,9.73e-08,59;UBERON:0004537,9.73e-08,59;UBERON:0006965,9.73e-08,59;UBERON:0000349,1.54e-07,5;UBERON:0004733,1.80e-07,12;UBERON:0002028,1.80e-07,12;UBERON:0007277,1.80e-07,12;UBERON:0002385,2.34e-07,64;UBERON:0001015,2.34e-07,64;UBERON:0000383,2.34e-07,64;UBERON:0004535,2.93e-07,109;UBERON:0001134,4.03e-07,62;UBERON:0002036,4.03e-07,62;UBERON:0003082,4.03e-07,62;UBERON:0000075,4.90e-07,16;UBERON:0011135,5.41e-07,5;UBERON:0002216,5.41e-07,5;UBERON:0011134,5.41e-07,5;UBERON:0002209,5.41e-07,5;UBERON:0002213,5.41e-07,5;UBERON:0005856,5.41e-07,5;UBERON:0005866,5.41e-07,5;UBERON:0005863,5.41e-07,5;UBERON:0007844,5.41e-07,5;UBERON:0011138,5.41e-07,5;UBERON:0001130,5.41e-07,5;UBERON:0001066,5.41e-07,5;UBERON:0001468,5.41e-07,5;UBERON:0001009,8.46e-07,112 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,19.0600183558472,7.62213964174206,2.01697543935533,1.20538905604795,0,1.46379839637152,1.23121058076788,4.08001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0,0,0,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,4.05217637326655,10.0630977418046,42.7386564915732,14.1867352879343,1.68203280042692,0,0.24666754841716,0.933633106199299,0,0,0.605429710579726,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,2.04154171254893,12.5291003658003,3.30642499762449,26.1360628602052,2.71993622206413,0,0,1.34668891163253,1.50142223846357,0.277064115484183,6.58466431321257,1.22595118319608,1.95309476578576,0.113432183160021,0,0,0.635795703478686,0.300091096084402,0.206105058476878,0.515281080091258,0.558350568994769,0.337552664482532,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,1.16344544182,0,0,3.19125739901845,0,0,2.83698264046557,1.3321108950805,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,4.27910715122155,0.868687840005475,1.84928690295345,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,23.0078439687451,8.4092157346918,0,0,0,0,0.902838299183157,4.5481500811197,1.03473071292505,1.99267679560631,0.921845842708516,0.695068915744663,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,3.72879623157567,3.53146770859379,9.8658341544888,2.09178681227927,0,0,0.460404944679482,2.52591785962135,1.63882051206045,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,32.6697216202443,30.0650768678636,0,0,0,0.412164046590889,0,0,0,0,0,3.86682873168488,0.308097234229289,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,5.03699754929024,1.3940745403212,2.46426864140871,3.19383618190213,1.73986598415015,0,0.715624433709956,0,1.58189712359363,0,0.255897791311334,0,8.90969094192623,0,0,0,0.117812402345686,1.41527737101321,6.34041284692033,0.421258456238981,0,3.41198885483798,3.16950440270266,4.09499734223957,2.82810863907426,10.1707304958219,1.65409603063837,5.97095077717098,3.5076070820301,0.578775534266688,3.9353685122798,1.01455188481352,6.196469961995,10.1410416911607,0.143411352204052,0,1.426684205925,0.354761064070598,1.05553817648832,0.329294892959902,0,0,0,0,0,0,0,0,0.443430153536676,2.06751060186264,7.61171413848254,9.1756464857085,5.12682468456746,3.81170840732462,2.87953591160336,9.72709966789076,8.10047155857172,10.3106272918255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,9.94147647766298,13.0822557261777,2.11486539543521,0,0,9.56390343605135,0,0,0,0,0,0.0898683511473268,0,0,8.28604607350242,4.7896618469388,1.11136990144637,2.90799823828566,8.16359263824291,0,0,0,0,0,0,0,0.689486746482929,0,0,14.1718621730214,6.63280412439744,0,4.42317039724898,0.591095237907095,3.29078095730959,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,12.1322039365219,0,10.5419000576403,0,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,4.16024019039416,0,0,0,0.34945333648406,0.343972064943233,0,0,0,0,0,0.90392296312213,0.137041924646751,0,4.05189094117624,0,0,2.34798294213288,0.19980960958213,0,0,0,0,0,0,0.951329442515298,0.836822770498666,0,0,9.60672461935663,10.6786195535755,0,4.29765441419957,0,3.6306712165393,1.3749625440701,0,0,0,0.223171457441873,0.53746777989381,0,0,0,0,0,5.31508400179643,0,11.9284453471395,23.9717994756373,0,0,0,0,0.77380195455795,2.91597871958518,0,0.945668487590378,0.734364233889974,0,0,0,0,0,0,3.25799761052228,2.5926644736038,5.55198512185996,0,0,1.19271615249795,0.226624183040251,0,1.32506888912221,10.6012024216471,8.46288651153216,0,0,0.106787412567695,2.35806457649499,0,0,0,0,0,0,0,0,0,0,7.08854543973589,13.6669416690199,15.02291168478,8.60113793535107,15.3082091120856,11.7983165588629,0,0,0,0,3.76425311517075,0.468334905806882,0,0.74627401443437,0,1.10961172300523,10.9853743059552,8.80487656134013,0,1.37304041038154,10.132471892137,0.932623203496683,3.54852359975121,0.159296767163702,0.449803112163605,2.94999618064893,31.1029655880642,3.19010057469594,0.521745061811734,0,0,0,2.54588122883583,1.39633724155235,21.8095867142892,0.796191777397232,1.60011105865261,0.686791410365586,0.673498977531838,2.52369796457302,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,14.6553942320835,0,0,0,0,0,0,0,0,0,0,2.39337735327393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,4.4318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| |||
|short_description=p2@SLC14A1 | |||
}} |
Latest revision as of 14:28, 19 September 2015
Short description: | p2@SLC14A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC14A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000321925, ENST00000415427, NM_001128588, NM_001146036, NM_015865, uc002lbf.3, uc002lbg.3, uc002lbh.3, uc002lbi.3, uc010dnk.2, uc010xcn.1, uc010xco.1_5end |
EntrezGene: | SLC14A1 |
HGNC: | 10918 |
UniProt: | Q13336G0W2N5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.39e-11 | 32 |
smooth muscle cell | 1.90e-09 | 43 |
smooth muscle myoblast | 1.90e-09 | 43 |
muscle cell | 1.59e-07 | 55 |
muscle precursor cell | 1.85e-07 | 58 |
myoblast | 1.85e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-07 | 58 |