FFCP PHASE1:Hg19::chr19:13953130..13953158,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:13953130..13953158,- | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_at_chr19:13953130..13953158,- | |||
|id=chr19:13953130..13953158,- | |||
|ontology_enrichment_celltype=CL:0000860!3.86e-29!45;CL:0002057!7.80e-29!42;CL:0000766!9.63e-29!76;CL:0000557!2.51e-23!71;CL:0000738!3.23e-22!140;CL:0000839!2.58e-21!70;CL:0002009!5.31e-21!65;CL:0002194!1.22e-19!63;CL:0000576!1.22e-19!63;CL:0000040!1.22e-19!63;CL:0000559!1.22e-19!63;CL:0000763!8.81e-19!112;CL:0000049!8.81e-19!112;CL:0002031!1.61e-16!124;CL:0000037!1.00e-15!172;CL:0000566!1.00e-15!172;CL:0000988!1.87e-15!182;CL:0002032!1.88e-15!165;CL:0000837!1.88e-15!165;CL:0002087!5.26e-15!119;CL:0002320!2.11e-11!365;CL:0000134!1.23e-10!358;CL:0000219!1.78e-09!390;CL:0000063!2.62e-08!578;CL:0000094!2.73e-08!8;CL:0000081!4.60e-08!11;CL:0002393!2.90e-07!9;CL:0002397!2.90e-07!9;CL:0002371!2.98e-07!591;CL:0000723!6.16e-07!436;CL:0000034!9.42e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-31;33!CL:0002057;1.03e-31;33!CL:0000473;1.70e-24;39!CL:0000234;1.70e-24;39!CL:0000766;2.26e-23;69!CL:0000576;2.85e-21;48!CL:0000094;8.85e-21;8!CL:0000081;2.94e-19;11!CL:0000763;3.19e-12;100!CL:0000623;1.95e-11;3!CL:0000767;9.23e-11;3!CL:0002393;1.06e-09;6!CL:0002397;1.06e-09;6!CL:0002087;1.64e-09;104!CL:0000771;2.77e-08;2!CL:0000738;2.92e-08;136!CL:0000097;2.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.05e-48,72;CL:0000738,2.76e-40,136;CL:0000860,2.27e-39,42;CL:0002057,2.27e-39,42;CL:0000473,8.12e-37,48;CL:0000234,8.12e-37,48;CL:0000557,3.27e-34,67;CL:0000839,3.62e-32,66;CL:0000763,1.82e-31,108;CL:0000049,1.82e-31,108;CL:0000037,1.37e-30,168;CL:0000988,3.98e-30,177;CL:0002009,1.52e-29,61;CL:0002032,6.82e-29,161;CL:0000837,6.82e-29,161;CL:0002194,3.92e-28,59;CL:0000576,3.92e-28,59;CL:0000040,3.92e-28,59;CL:0000559,3.92e-28,59;CL:0002031,1.90e-27,120;CL:0002087,4.85e-25,115;CL:0000094,5.01e-21,8;CL:0000081,1.98e-19,11;CL:0000134,7.55e-12,354;CL:0000623,1.65e-11,3;CL:0000825,1.65e-11,3;CL:0002320,2.11e-11,361;CL:0000767,6.97e-11,3;CL:0000219,1.47e-10,386;CL:0000771,2.42e-08,2;CL:0000048,6.28e-08,427;CL:0000723,1.15e-07,433;CL:0000097,2.48e-07,5;CL:0002028,2.48e-07,5;CL:0000034,2.49e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.57e-29;42!CL:0000049;8.59e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.76e-22!102;UBERON:0003061!1.76e-22!102;UBERON:0002371!7.10e-21!80;UBERON:0002193!1.12e-19!112;UBERON:0001474!1.04e-18!86;UBERON:0004765!3.15e-15!101;UBERON:0001434!3.15e-15!101;UBERON:0003081!4.25e-12!216;UBERON:0002405!5.44e-12!115;UBERON:0002384!1.08e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-07;15!UBERON:0000179;1.64e-07;15!UBERON:0000463;1.64e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.43e-33,98;UBERON:0003061,5.43e-33,98;UBERON:0002371,2.56e-29,76;UBERON:0002193,3.87e-29,108;UBERON:0001474,1.19e-26,82;UBERON:0004765,1.21e-23,90;UBERON:0002405,1.19e-22,93;UBERON:0001434,1.46e-20,100;UBERON:0003081,1.94e-14,203;UBERON:0002384,8.56e-11,371;UBERON:0002204,1.62e-09,167;UBERON:0000178,1.23e-07,15;UBERON:0000179,1.23e-07,15;UBERON:0000463,1.23e-07,15;UBERON:0000926,8.91e-07,315;UBERON:0004120,8.91e-07,315;UBERON:0006603,8.91e-07,315 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.157421562627358,2.36018566109342,1.53531759238885,2.63187409637329,0.919421224478927,0.6024118375565,0,0,0,0,3.87796785972314,5.81578897663411,6.07630438004385,0,0,0,1.01778767145695,1.51150377475524,0.242584061187816,0.232429036905685,3.70051099219643,1.54853185447552,2.01384674625505,1.2808035326455,0.709446689665756,1.72372840368309,2.5819387343353,1.35426486594342,1.31769637679823,2.18324920046277,1.34834090667051,2.14258724659632,0.962787081228281,3.19668562899521,0.659702600373432,1.39624560335142,0.426224750532694,1.7412554317715,0.56738522469114,0.622822248995575,2.76373531782418,1.0429658368404,0.217188844705117,1.81619850790011,0.736555271975129,0.316462387440884,0.422510572623884,1.4882300997553,0.419317291016752,0.336985893439485,1.05123824989054,0.16072558669708,0.285012743741249,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0.526768169550154,0.590129310341499,3.53709686474248,0.616804496998528,0,0,0,0,0.222820913770347,0.294605907474837,0,0.541607727530031,0.384273959177026,0.390178042679635,0,0,0,0,0,0,0,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,1.81446068902259,6.15112450302067,2.31719046212478,0,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0,0.189069634328136,0.221729397462564,0,0.130979075497713,0.728590576585084,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,2.63560834872127,11.6334079244498,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.89694817844431,0.427114777637135,0.423863802319124,0.300091096084402,0,0.772921620136887,0,0.675105328965065,0,0,0.0920498986422993,0.161646056818812,1.06502877754984,0.10075209822764,0.169560592310488,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0.925971025153221,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0.871901815541886,0,0.492663237895943,0.088048434013226,9.32976519933474,8.50307725160072,7.70078843900918,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0.239624855491583,2.29723871668228,0,0.144781306667579,0,0,0,2.95546140302891,3.45004119775228,3.59360501583295,0,0,0,0.167516265334349,0,2.99602809578873,23.932916736322,0.828831026872071,0,0,0.271265023699736,0.623912584592421,0.535286966391485,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0.413536052245775,3.8828556147351,1.60091336705167,0,0,0.30239029332968,0,0.460385919864187,0,0.384417447767103,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.601519410909855,0.552485933615378,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.165284915360978,0,1.14851441245126,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0,0.569647187174163,0.952927101831156,0.411362273086194,3.24236655596359,1.62009431171434,2.37937552888281,0,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.622079175323615,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0.156980256395025,0,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.174118413160805,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.391102765469606,0,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0,0,0.135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| |||
|short_description=p@chr19:13953130..13953158,- | |||
}} |
Latest revision as of 04:10, 26 July 2015
Short description: | p@chr19:13953130..13953158, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13953130..13953158, - |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.43e-33 | 98 |
blood island | 5.43e-33 | 98 |
bone marrow | 2.56e-29 | 76 |
hemolymphoid system | 3.87e-29 | 108 |
bone element | 1.19e-26 | 82 |
skeletal element | 1.21e-23 | 90 |
immune system | 1.19e-22 | 93 |
skeletal system | 1.46e-20 | 100 |
lateral plate mesoderm | 1.94e-14 | 203 |
connective tissue | 8.56e-11 | 371 |
musculoskeletal system | 1.62e-09 | 167 |
blood | 1.23e-07 | 15 |
haemolymphatic fluid | 1.23e-07 | 15 |
organism substance | 1.23e-07 | 15 |
mesoderm | 8.91e-07 | 315 |
mesoderm-derived structure | 8.91e-07 | 315 |
presumptive mesoderm | 8.91e-07 | 315 |