FFCP PHASE1:Hg19::chr19:15270468..15270502,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:15270468..15270502,- | |||
|description=CAGE_peak_at_chr19:15270468..15270502,- | |||
|id=chr19:15270468..15270502,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.25e-09;6!CL:1000415;9.86e-08;2!CL:0002575;1.05e-07;2!CL:0000047;1.64e-07;2!CL:0002549;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.99e-09,6;CL:0000138,1.99e-09,6;CL:1000415,9.87e-08,2;CL:0002575,1.05e-07,2;CL:0002549,1.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;9.72e-14;1!UBERON:0006965;1.64e-07;2 | |||
|ontology_enrichment_disease=DOID:17!1.85e-07!5;DOID:450!1.85e-07!5;DOID:66!1.85e-07!5;DOID:423!1.85e-07!5;DOID:0080000!1.85e-07!5;DOID:11722!1.85e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.03e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;9.72e-14;1!UBERON:0008811;9.72e-14;1!UBERON:0005629;1.64e-07;2!UBERON:0005358;1.64e-07;2!UBERON:0001886;1.64e-07;2!UBERON:0004086;1.64e-07;2!UBERON:0005282;1.64e-07;2!UBERON:0005281;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,7.55e-14,1;UBERON:0008811,7.55e-14,1;UBERON:0006258,7.55e-14,1;UBERON:0005876,7.55e-14,1;UBERON:0004874,7.55e-14,1;UBERON:0005629,1.28e-07,2;UBERON:0005358,1.28e-07,2;UBERON:0001886,1.28e-07,2;UBERON:0004086,1.28e-07,2;UBERON:0005282,1.28e-07,2;UBERON:0005281,1.28e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69870898099936,1.50401373190767,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0.573673241497627,0,0,1.06748995729705,0,0,0,0.163461903113459,1.66493170409425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,1.2813443329114,0.635795703478686,0.600182192168805,0.103052529238439,0.515281080091258,0.744467425326359,0,0,0.504867548488229,0.644349290496095,0,1.06502877754984,0,0.847802961552438,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,2.93701736194111,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,1.79323189425963,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0,0,0.520855522170466,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0.41827123283581,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0.0882561266915003,0,0,0,0.0633107959558787,3.12882212375685,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,1.42732666772484,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0.127762427639595,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0.444925607568277,0,0.157115589916002,0.280272163313789,0.913158720509496,0,0,0,0,0,0.869291361512897,0,0.207216164163037,0.17071847709395,0,0.860454717640555,0.118332000730565,0,0,0,0,0,0.335566295393377,0,0.121917924982269,0,0,1.1598144313382,0,0,0,0,0.33883824611688,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.515663103788617,0,1.42843150884526,0,0,0,0,0,0.315543124386369,0,0.436350690340377,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0,0,0,0.606229585745915,0.267964130156178,0,0.103432995861895,0.426467963801962,0,0.387533459016037,0.186224142887574,0,0.25458863311266,0.404234377916439,0,0.342233301085281,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr19:15270468..15270502,- | |||
}} |
Latest revision as of 04:31, 26 July 2015
Short description: | p@chr19:15270468..15270502, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:15270468..15270502, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.99e-09 | 6 |
chondrocyte | 1.99e-09 | 6 |
epithelial cell of gall bladder | 9.87e-08 | 2 |
central nervous system pericyte | 1.05e-07 | 2 |
fibroblast of choroid plexus | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 7.55e-14 | 1 |
intromittent organ | 7.55e-14 | 1 |
lateral plate mesenchyme | 7.55e-14 | 1 |
undifferentiated genital tubercle | 7.55e-14 | 1 |
somatopleure | 7.55e-14 | 1 |
vascular plexus | 1.28e-07 | 2 |
ventricle of nervous system | 1.28e-07 | 2 |
choroid plexus | 1.28e-07 | 2 |
brain ventricle | 1.28e-07 | 2 |
ventricular system of brain | 1.28e-07 | 2 |
ventricular system of central nervous system | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.64e-07 | 2 |