FFCP PHASE1:Hg19::chr19:33865006..33865017,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:33865006..33865017,- | |||
|coexpression_cluster_id=C578 | |||
|description=CAGE_peak_at_chr19:33865006..33865017,- | |||
|id=chr19:33865006..33865017,- | |||
|ontology_enrichment_celltype=CL:0000037!8.14e-11!172;CL:0000566!8.14e-11!172;CL:0000988!2.94e-10!182;CL:0000738!1.70e-08!140;CL:0000540!2.02e-08!6;CL:0000031!2.02e-08!6;CL:0000404!2.02e-08!6;CL:0002032!4.22e-08!165;CL:0000837!4.22e-08!165;CL:0000623!1.22e-07!3;CL:0000825!1.22e-07!3;CL:0000784!3.13e-07!3;CL:0002031!5.09e-07!124;CL:0000838!5.82e-07!52;CL:0000542!9.45e-07!53;CL:0000051!9.45e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.79e-31;3!CL:0000784;4.13e-14;3!CL:0000037;1.37e-11;1!CL:0001024;1.37e-11;1!CL:0002032;3.28e-11;1!CL:0000557;3.28e-11;1!CL:0000542;2.67e-09;53!CL:0000791;3.14e-09;18!CL:0000789;3.14e-09;18!CL:0002419;3.14e-09;18!CL:0000625;6.18e-09;11!CL:0000451;1.22e-08;10!CL:0000840;1.68e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.40e-31,3;CL:0000825,2.40e-31,3;CL:0000838,1.41e-14,52;CL:0000542,2.80e-14,53;CL:0000051,2.80e-14,53;CL:0000784,6.16e-14,3;CL:0000037,9.53e-13,168;CL:0000738,3.67e-12,136;CL:0002031,5.14e-12,120;CL:0000988,5.62e-12,177;CL:0001024,1.60e-11,1;CL:0002032,5.88e-10,161;CL:0000837,5.88e-10,161;CL:0000791,3.25e-09,18;CL:0000789,3.25e-09,18;CL:0002420,3.25e-09,18;CL:0002419,3.25e-09,18;CL:0000790,3.25e-09,18;CL:0000625,5.94e-09,11;CL:0002087,7.56e-09,115;CL:0000451,1.29e-08,10;CL:0000840,1.57e-07,5;CL:0001029,1.57e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000051;2.67e-09;53!CL:0000790;3.14e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,2.05520307534393,0.553995408531877,1.20326668482085,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,0,1.52909291250092,3.96513985737078,0.560508562981536,1.31692042387539,0.590129310341499,1.17903228824749,0.205601498999509,0.334372990781356,0,0,0,0,0,0.221533894583621,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,2.41928091869679,2.67440195783507,2.46201486600758,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.829312462163088,0.720599767084807,1.38866676769018,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,4.74380664690938,3.33691894327346,0,0,0.773288812777695,0,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.247127877893006,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0.415440338029185,0.2249738915515,1.5476039091159,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:33865006..33865017,- | |||
}} |
Latest revision as of 06:18, 26 July 2015
Short description: | p@chr19:33865006..33865017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:33865006..33865017, - |
Coexpression cluster: | C578_CD34_Natural_CD8_CD4_CD133_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.40e-31 | 3 |
pro-NK cell | 2.40e-31 | 3 |
lymphoid lineage restricted progenitor cell | 1.41e-14 | 52 |
lymphocyte | 2.80e-14 | 53 |
common lymphoid progenitor | 2.80e-14 | 53 |
plasmacytoid dendritic cell | 6.16e-14 | 3 |
hematopoietic stem cell | 9.53e-13 | 168 |
leukocyte | 3.67e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 5.14e-12 | 120 |
hematopoietic cell | 5.62e-12 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.60e-11 | 1 |
hematopoietic oligopotent progenitor cell | 5.88e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.88e-10 | 161 |
mature alpha-beta T cell | 3.25e-09 | 18 |
alpha-beta T cell | 3.25e-09 | 18 |
immature T cell | 3.25e-09 | 18 |
mature T cell | 3.25e-09 | 18 |
immature alpha-beta T cell | 3.25e-09 | 18 |
CD8-positive, alpha-beta T cell | 5.94e-09 | 11 |
nongranular leukocyte | 7.56e-09 | 115 |
dendritic cell | 1.29e-08 | 10 |
immature conventional dendritic cell | 1.57e-07 | 5 |
common dendritic progenitor | 1.57e-07 | 5 |