FFCP PHASE1:Hg19::chr19:45323016..45323031,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:45323016..45323031,+ | |||
|coexpression_cluster_id=C924 | |||
|description=CAGE_peak_at_chr19:45323016..45323031,+ | |||
|id=chr19:45323016..45323031,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.74e-27!254;CL:0000223!4.19e-10!59;CL:0000076!1.41e-08!62;CL:0002076!2.79e-08!43;CL:0000077!7.18e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.25e-08;19!CL:0002076;9.56e-08;42!CL:0000076;3.72e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.29e-23,253;CL:0000076,1.09e-14,63;CL:0000223,2.99e-12,58;CL:0000077,1.56e-08,19;CL:0002076,1.65e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.21e-08;10!UBERON:0007687;7.21e-08;10!UBERON:0001041;8.45e-08;30!CL:0000223;1.18e-07;58!UBERON:0003104;5.73e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.20e-23!106;DOID:0050687!1.41e-20!143;DOID:162!7.00e-12!235;DOID:14566!1.52e-11!239;DOID:7!2.83e-09!39;DOID:299!7.95e-08!25;DOID:1749!8.91e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.06e-13;14!DOID:7;5.42e-10;39!DOID:305;8.89e-10;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.62e-27,106;DOID:0050687,7.62e-21,143;DOID:162,2.00e-14,235;DOID:14566,7.43e-14,239;DOID:1749,1.13e-13,14;DOID:7,1.18e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.59e-14!169;UBERON:0000925!7.59e-14!169;UBERON:0006595!7.59e-14!169;UBERON:0001007!3.14e-12!155;UBERON:0001555!3.14e-12!155;UBERON:0007026!3.14e-12!155;UBERON:0005911!2.11e-10!82;UBERON:0004921!2.17e-10!129;UBERON:0004185!2.17e-10!129;UBERON:0005177!6.34e-10!107;UBERON:0000481!5.46e-09!347;UBERON:0001048!1.98e-08!168;UBERON:0000466!2.68e-08!126;UBERON:0000077!4.09e-08!130;UBERON:0006554!5.11e-08!44;UBERON:0003101!5.49e-08!22;UBERON:0000079!5.49e-08!22;UBERON:0002530!5.76e-08!59;UBERON:0001008!1.27e-07!45;UBERON:0005153!2.19e-07!37;UBERON:0005157!4.91e-07!51;UBERON:0000464!5.92e-07!104;UBERON:0003929!9.77e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;7.12e-07;4!UBERON:0004785;7.12e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.29e-11,82;UBERON:0002530,7.66e-10,59;UBERON:0005153,3.61e-08,37;UBERON:0004119,1.00e-07,160;UBERON:0000925,1.00e-07,160;UBERON:0006595,1.00e-07,160;UBERON:0005177,1.80e-07,101;UBERON:0001007,3.68e-07,145;UBERON:0001555,3.68e-07,145;UBERON:0007026,3.68e-07,145;UBERON:0003343,6.04e-07,4;UBERON:0004785,6.04e-07,4;UBERON:0005157,8.32e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.738726348460727,0,0.940364164434263,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,0,0,0,0.443458794925128,0,0.851363990735132,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,1.74437620857014,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0,0.484938170456436,0,0.10075209822764,0,0,0.545492241181669,0,1.58565817968474,1.06023814657188,0.813357600086629,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,2.58275720940538,0.686271241194102,1.75600456653801,0,2.01057944823262,5.37012981919472,0,0,1.44331342025273,0.34779121492523,0.117408694235822,0,0.462985512576611,0.380508304469197,0,1.71697232418975,0,0,0,0,0,0.567100388969546,0.179117045405697,2.3250715081117,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,1.06617584622764,0.791951872933429,0,0,1.09970290300263,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.50051156317903,0,0.415941723061614,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,5.19695633243976,0.40101294060657,1.65745780084613,0.114814448164607,0,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.223874754722178,2.19259876645935,0.784306353074702,0.256450125116389,0.328014645699706,0.325378394664303,0.412164046590889,0.27470839445503,0.247528499761764,1.14853107599234,1.95018073810956,0,1.16004861950546,0,0,0,0,0.145016693914229,0.0852266274161009,0.712256285173899,0.661139661443912,0.384380134730212,1.27612712494584,0.30347334256665,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.430234056612155,0,0.35667105148125,0,0,0.329294892959902,0,0,0.48111056362756,0.670302275535787,0,0.282431402330337,1.72202149068492,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,2.45040215981032,0,0.144269212976445,0,0,0,0,2.32840940996271,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0.445234820091624,0,2.53350489753592,1.19548792950642,0,1.51159648712566,0,0,0,0.629078458031288,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0.260427761085233,1.83665999992011,0.724999575434793,3.64139034513599,2.2882828526349,3.30942754475111,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,5.01925479402972,0.153900517007594,0.113942055847001,0.922255617552241,1.52587995496613,1.4124158349861,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0.816164040795739,0.989471500037586,0.216388639742091,0.995261931078505,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0.586993856796269,0.485560759068186,0.394584402849391,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,1.13843818411917,0,1.21491816834592,5.38958185779077,0.783532859223623,0.52418000472609,0,0,0,0.0821154570532092,0.290967049465258,0.176512253383001,0,0,0,0.0633107959558787,1.56441106187842,0.721429382263803,0,0.799238438328521,0.432271251462318,0,2.57392496792947,0.432164393964449,0.745515213392595,2.59263438078475,0.407712618220842,0.732219924186332,0.203996435272644,0,0,0,0,0,0,0,1.14580212005842,0.717873024576814,0.998395002494955,0.429226048136571,0,0.53746777989381,0,0,2.12714592229504,2.14281231791033,2.08950985947973,3.74024429756045,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0.182248669974074,0.670869375198532,1.18208560948797,1.31136470337495,0.211200673038813,0,1.15149118391667,0,0.662091970365432,0.25426853765475,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0.293104467356165,0,0,0,0,0.704815022316672,0.106787412567695,2.20086027139532,0.828478110694391,0,0,0,0,0,0,0,0,3.76929831000562,0,0,0.250381861413,0,0.110929051536852,0.248385611765534,0.415045904808692,0.499921631848426,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.3980958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| |||
|short_description=p@chr19:45323016..45323031,+ | |||
}} |
Latest revision as of 14:45, 27 July 2015
Short description: | p@chr19:45323016..45323031, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45323016..45323031, + |
Coexpression cluster: | C924_oral_cervical_smallcell_serous_Keratinocyte_Prostate_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.29e-23 | 253 |
squamous epithelial cell | 1.09e-14 | 63 |
endodermal cell | 2.99e-12 | 58 |
mesothelial cell | 1.56e-08 | 19 |
endo-epithelial cell | 1.65e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.29e-11 | 82 |
gland | 7.66e-10 | 59 |
epithelial bud | 3.61e-08 | 37 |
endoderm-derived structure | 1.00e-07 | 160 |
endoderm | 1.00e-07 | 160 |
presumptive endoderm | 1.00e-07 | 160 |
trunk region element | 1.80e-07 | 101 |
digestive system | 3.68e-07 | 145 |
digestive tract | 3.68e-07 | 145 |
primitive gut | 3.68e-07 | 145 |
mucosa of oral region | 6.04e-07 | 4 |
respiratory system mucosa | 6.04e-07 | 4 |
epithelial fold | 8.32e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.62e-27 | 106 |
cell type cancer | 7.62e-21 | 143 |
cancer | 2.00e-14 | 235 |
disease of cellular proliferation | 7.43e-14 | 239 |
squamous cell carcinoma | 1.13e-13 | 14 |
disease of anatomical entity | 1.18e-12 | 39 |