FFCP PHASE1:Hg19::chr19:58694421..58694485,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13068 | |||
|TSSclassifier=strong | |||
|UniProt=Q96GC6 | |||
|association_with_transcript=25bp_to_ENST00000326804,ENST00000345813,ENST00000424679,NM_016324,NM_016325,NM_133502,uc002qrq.1,uc002qrr.1,uc002qrs.1,uc010eum.1,uc010yhu.1,uc010yhv.1_5end | |||
|cluster_id=chr19:58694421..58694485,+ | |||
|description=CAGE_peak_1_at_ZNF274_5end | |||
|id=chr19:58694421..58694485,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.61e-20!76;CL:0000557!9.31e-20!71;CL:0000839!7.29e-18!70;CL:0002009!8.37e-18!65;CL:0000763!2.67e-17!112;CL:0000049!2.67e-17!112;CL:0002194!9.88e-17!63;CL:0000576!9.88e-17!63;CL:0000040!9.88e-17!63;CL:0000559!9.88e-17!63;CL:0002057!1.64e-16!42;CL:0000860!6.99e-16!45;CL:0000066!3.32e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.33e-16;33!CL:0002057;4.33e-16;33!CL:0000473;6.88e-14;39!CL:0000234;6.88e-14;39!CL:0000576;1.24e-10;48!CL:0000766;5.63e-10;69!CL:0000763;5.81e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-20,72;CL:0000557,2.49e-20,67;CL:0000839,2.28e-18,66;CL:0002009,2.28e-18,61;CL:0000763,1.60e-17,108;CL:0000049,1.60e-17,108;CL:0000473,2.40e-17,48;CL:0000234,2.40e-17,48;CL:0002194,2.85e-17,59;CL:0000576,2.85e-17,59;CL:0000040,2.85e-17,59;CL:0000559,2.85e-17,59;CL:0000860,1.61e-16,42;CL:0002057,1.61e-16,42;CL:0000066,3.85e-08,253 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.89e-16!80;UBERON:0001474!2.31e-16!86;UBERON:0004765!8.86e-13!101;UBERON:0001434!8.86e-13!101;UBERON:0002204!7.78e-12!167;UBERON:0002405!8.26e-11!115;UBERON:0002390!4.75e-09!102;UBERON:0003061!4.75e-09!102;UBERON:0003081!6.95e-09!216;UBERON:0000467!7.93e-09!625;UBERON:0000480!1.51e-08!626;UBERON:0000468!3.62e-08!659;UBERON:0002193!6.29e-08!112;UBERON:0000922!8.85e-08!612;UBERON:0000923!1.70e-07!604;UBERON:0005291!1.70e-07!604;UBERON:0006598!1.70e-07!604;UBERON:0002532!1.70e-07!604;UBERON:0002050!2.23e-07!605;UBERON:0005423!2.23e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.61e-17,76;UBERON:0001474,1.18e-16,82;UBERON:0004765,1.09e-15,90;UBERON:0001434,2.21e-12,100;UBERON:0002204,1.27e-11,167;UBERON:0002405,1.01e-10,93;UBERON:0003081,2.14e-09,203;UBERON:0002390,5.00e-09,98;UBERON:0003061,5.00e-09,98;UBERON:0002193,7.09e-08,108;UBERON:0000922,1.38e-07,592;UBERON:0005423,2.01e-07,581;UBERON:0002050,4.72e-07,564;UBERON:0000923,9.57e-07,560;UBERON:0010316,9.57e-07,560;UBERON:0005291,9.57e-07,560;UBERON:0006598,9.57e-07,560;UBERON:0010317,9.57e-07,560;UBERON:0002532,9.57e-07,560 | |||
|phase1_expression=3.45188920614058,4.92431204949261,3.10099689011137,1.0007329835313,2.23480547213644,2.61701557230111,5.06599756336621,4.42203911398782,2.35067065379855,2.94880723801811,7.6758128476967,4.58726881473362,4.48403862988371,2.72285976512103,2.31978163009541,4.03395087871065,7.8350288643117,8.03341099426111,4.87932798790507,1.96993692922861,2.24400760368678,2.5076377718247,4.29353980696585,3.96935832711364,4.89616294419731,1.45185470921107,1.47781061009902,1.18066171970519,5.50709987588466,3.45446458287491,5.57338043937874,4.59710612239464,8.433765725791,14.4204063965047,0.619737604642413,0.710846162437108,7.04641054403633,4.9859586767869,4.21143339687298,5.64228263861215,4.03047853631864,4.85840499028469,7.46969146139141,8.28769961043519,12.0920301980419,8.49044214157357,23.2429036905685,22.6142338412004,24.7765096716083,31.3584707631144,21.0051779353863,19.391542850864,19.6505038019873,11.6187243045089,18.9597081232078,16.3770835402066,14.4640259530658,14.8317499733756,26.9353825286394,10.9115869205872,12.7867425159808,11.8746468067218,13.563528718271,14.9178662686443,32.5034347264014,33.4757282567772,34.8780459437522,28.8935965045255,23.4667313289091,19.9813737128707,23.005181100068,22.4649357952414,25.9499157701525,2.74631872205524,5.74031609905618,6.28975936525128,4.26848798356681,5.25619124945272,1.12507910687956,8.55038231223746,5.9675003159727,4.93193215164512,3.51992488922645,1.09227722252426,0.889509253863555,2.56038133539904,1.60158394814405,2.29900975981793,2.64417949113945,1.90810750907073,0.569212969109448,1.17447437874188,0.382273228125229,5.28685314316103,3.92355994087075,2.63384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0.167186495390678,1.95553359980154,7.101717086021,0,0.557052284425868,0.589211814949674,0.664601683750863,0.812411591295047,0.25618263945135,1.04047478047903,0.986627427622057,3.86890024900188,0.869409257205157,0.741432815810302,1.60524496853828,2.09071047609954,1.13309342697566,1.14966148080576,1.37450978193052,0.759059076058509,1.27426165729639,1.30216690771284,0,0.903450714466637,0.76791966692651,0,0.947109008176067,1.64225599384209,0.403213486449465,0.534880391567015,0.868946423296794,14.6284119788377,6.03630773733273,4.47518966452356,3.97583067623023,2.50668955317945,1.01392563272577,0,6.32625331393427,2.55244006342983,2.4390233720882,2.89854792787316,5.04269440666194,4.73583874780305,5.19098219898201,6.49094787309367,9.5771355514597,9.44001519683943,0.715471872916026,0,0,3.18019851786728,7.74211135595512,4.16568601929113,5.08777147731609,6.71199097935849,3.85165258716094,4.17989933073621,2.84258435086262,4.98072767761394,3.3472061276467,5.63961043952806,8.36299316290364,1.95249646038536,2.20597848207521,9.72170337458112,2.14319347881791,1.57170560838319,2.13961812918312,3.06633274931766,1.89853131913626,3.48083313467774,7.9068250461638,11.6334079244498,4.79703457356788,4.47274756525787,2.78587125662075,16.4187384208391,6.02356903572509,3.90135220418193,1.12135520028461,7.47242970107935,2.96001058100592,1.55605517699883,7.9479296521116,4.57693328717684,2.72443369760877,3.45705554687999,6.7953215231801,2.18512053781224,3.99330275081114,2.39117888882882,3.99277295388801,4.04682360920329,2.94946694074722,4.28723759635276,3.31652656741774,5.06296327761251,2.37600571456411,4.69807165629258,1.82032272387605,2.87447256726495,3.70339450698946,2.87772595705518,4.43302584774693,3.07284334616587,3.98434134538726,4.20666564938471,5.44474479168101,8.61070251306537,1.92201649936711,2.54318281391474,9.00273288253207,2.57631323096097,4.63752972082133,2.23340227597908,6.24472429292685,3.50773218580315,5.80597680761463,2.02509777013059,0.80823028409406,2.84007674013291,4.33234022378853,3.22165125389926,10.8226077771446,9.00062197949754,7.7437240755031,4.87894824518382,4.10842281796604,4.88014560051977,5.70135802584537,6.30802127189071,6.20461510428911,7.8224766164908,5.14592750554308,6.90674606762403,5.57241513638375,4.33127689001751,3.19428360107579,2.86593973132773,3.13314338848527,3.19852520923942,2.17879444092406,3.79632990577755,3.37078270400411,3.33576490713088,3.46272441251751,0,2.80483547606892,2.4694440679884,0,8.87285243752816,9.82827216677626,5.90789906681404,2.20731549707325,7.2563178740437,3.08822058537346,11.3042793970884,12.3641928583382,4.52380375852339,4.72201070308501,7.16778271682714,2.07986957055916,1.44331342025273,1.27523445472584,4.93116515790451,4.61972632835436,4.62985512576611,3.61482889245737,1.58040879591855,2.57545848628462,3.44703808522356,6.31811515875942,4.7561971932393,5.62403003920662,7.8951600253464,6.09632918142262,14.9562732913757,9.30028603244678,7.28427090413901,6.89728533054321,3.69803422855549,14.9276243189356,14.4119953416961,17.2952133794141,2.85740524314761,6.49380323449072,5.86087236050235,6.84289784090821,3.80461723002297,7.80891950394185,4.57322292208925,4.03671903643299,2.1798003441664,3.3735611477637,4.52451005152222,14.3062578340753,0.845302752556,2.39344304926383,6.24044621468197,3.60090323966999,4.255473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| |||
|short_description=p1@ZNF274 | |||
}} |
Latest revision as of 07:03, 20 September 2015
Short description: | p1@ZNF274 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF274_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000326804, ENST00000345813, ENST00000424679, NM_016324, NM_016325, NM_133502, uc002qrq.1, uc002qrr.1, uc002qrs.1, uc010eum.1, uc010yhu.1, uc010yhv.1_5end |
EntrezGene: | ZNF274 |
HGNC: | 13068 |
UniProt: | Q96GC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.06e-20 | 72 |
granulocyte monocyte progenitor cell | 2.49e-20 | 67 |
myeloid lineage restricted progenitor cell | 2.28e-18 | 66 |
macrophage dendritic cell progenitor | 2.28e-18 | 61 |
myeloid cell | 1.60e-17 | 108 |
common myeloid progenitor | 1.60e-17 | 108 |
defensive cell | 2.40e-17 | 48 |
phagocyte | 2.40e-17 | 48 |
monopoietic cell | 2.85e-17 | 59 |
monocyte | 2.85e-17 | 59 |
monoblast | 2.85e-17 | 59 |
promonocyte | 2.85e-17 | 59 |
classical monocyte | 1.61e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-16 | 42 |
epithelial cell | 3.85e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.61e-17 | 76 |
bone element | 1.18e-16 | 82 |
skeletal element | 1.09e-15 | 90 |
skeletal system | 2.21e-12 | 100 |
musculoskeletal system | 1.27e-11 | 167 |
immune system | 1.01e-10 | 93 |
lateral plate mesoderm | 2.14e-09 | 203 |
hematopoietic system | 5.00e-09 | 98 |
blood island | 5.00e-09 | 98 |
hemolymphoid system | 7.09e-08 | 108 |
embryo | 1.38e-07 | 592 |
developing anatomical structure | 2.01e-07 | 581 |
embryonic structure | 4.72e-07 | 564 |
germ layer | 9.57e-07 | 560 |
germ layer / neural crest | 9.57e-07 | 560 |
embryonic tissue | 9.57e-07 | 560 |
presumptive structure | 9.57e-07 | 560 |
germ layer / neural crest derived structure | 9.57e-07 | 560 |
epiblast (generic) | 9.57e-07 | 560 |