FFCP PHASE1:Hg19::chr1:116383738..116383752,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4808 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7818 | |||
|TSSclassifier=strong | |||
|UniProt=Q02577 | |||
|association_with_transcript=0bp_to_ENST00000320238,NM_005599,uc001efy.2_5end | |||
|cluster_id=chr1:116383738..116383752,- | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_1_at_NHLH2_5end | |||
|id=chr1:116383738..116383752,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.35e-11;2!CL:0000242;6.35e-11;2!CL:0002319;5.65e-08;25!CL:0002573;3.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.48e-11,2;CL:0002319,5.43e-08,25;CL:0002573,3.32e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.79e-16;3!UBERON:0006241;1.59e-14;3!UBERON:0003057;1.59e-14;3!UBERON:0006601;3.60e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.55e-47!57;UBERON:0005068!1.55e-47!57;UBERON:0006241!1.55e-47!57;UBERON:0007135!1.55e-47!57;UBERON:0000073!3.79e-45!94;UBERON:0001016!3.79e-45!94;UBERON:0001017!9.02e-42!82;UBERON:0005743!1.99e-41!86;UBERON:0002616!1.52e-37!59;UBERON:0000955!2.47e-36!69;UBERON:0006238!2.47e-36!69;UBERON:0003075!1.16e-31!86;UBERON:0007284!1.16e-31!86;UBERON:0002346!1.29e-31!90;UBERON:0000924!1.71e-29!173;UBERON:0006601!1.71e-29!173;UBERON:0002619!3.61e-29!22;UBERON:0004121!3.84e-29!169;UBERON:0003076!3.05e-26!15;UBERON:0003057!3.05e-26!15;UBERON:0000033!6.28e-26!123;UBERON:0002780!6.57e-26!41;UBERON:0001890!6.57e-26!41;UBERON:0006240!6.57e-26!41;UBERON:0000153!1.95e-25!129;UBERON:0007811!1.95e-25!129;UBERON:0000956!3.31e-25!25;UBERON:0000203!3.31e-25!25;UBERON:0003080!3.83e-25!42;UBERON:0001950!7.68e-25!20;UBERON:0002020!1.07e-24!34;UBERON:0003528!1.07e-24!34;UBERON:0001893!3.68e-24!34;UBERON:0002791!1.48e-22!33;UBERON:0001869!4.40e-21!32;UBERON:0004733!5.96e-20!12;UBERON:0002028!5.96e-20!12;UBERON:0007277!5.96e-20!12;UBERON:0007023!3.20e-19!115;UBERON:0004732!3.17e-18!13;UBERON:0003056!6.79e-17!61;UBERON:0002298!9.59e-15!8;UBERON:0002680!1.59e-13!9;UBERON:0001895!1.59e-13!9;UBERON:0010092!1.59e-13!9;UBERON:0002021!8.77e-12!5;UBERON:0001871!3.77e-10!7;UBERON:0000200!2.20e-09!6;UBERON:0000988!1.39e-08!3;UBERON:0001896!2.27e-08!3;UBERON:0005290!2.27e-08!3;UBERON:0010096!2.27e-08!3;UBERON:0006331!3.52e-08!3;UBERON:0002240!4.58e-08!3;UBERON:0000475!6.46e-08!365;UBERON:0001872!6.52e-08!5;UBERON:0000064!9.65e-08!219;UBERON:0000025!1.10e-07!194;UBERON:0002771!1.23e-07!3;UBERON:0004111!2.37e-07!241;UBERON:0002037!3.30e-07!6;UBERON:0006215!3.30e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;9.79e-32;12!UBERON:0002028;9.79e-32;12!UBERON:0004732;3.57e-29;13!UBERON:0002298;1.52e-28;6!UBERON:0000073;2.21e-20;53!UBERON:0002616;2.21e-20;53!UBERON:0002680;1.54e-19;9!UBERON:0001895;1.54e-19;9!UBERON:0002619;9.57e-19;22!UBERON:0000956;2.28e-16;25!UBERON:0000203;2.28e-16;25!UBERON:0001016;1.10e-15;83!UBERON:0000988;2.50e-15;3!UBERON:0001896;5.42e-15;3!UBERON:0005290;5.42e-15;3!UBERON:0002240;1.59e-14;3!UBERON:0005174;1.59e-14;3!UBERON:0001137;1.59e-14;3!UBERON:0003528;1.97e-14;34!UBERON:0002020;1.97e-14;34!UBERON:0001017;2.18e-13;75!UBERON:0001950;4.85e-13;20!UBERON:0002791;7.00e-12;32!UBERON:0001869;8.12e-12;32!UBERON:0002148;3.77e-11;2!UBERON:0006331;3.77e-11;2!UBERON:0009662;3.77e-11;2!UBERON:0001954;4.38e-11;2!UBERON:0003022;4.38e-11;2!UBERON:0002421;4.38e-11;2!UBERON:0002600;4.38e-11;2!UBERON:0000955;4.65e-11;68!UBERON:0002780;8.00e-11;41!UBERON:0001890;8.00e-11;41!UBERON:0001893;4.13e-10;34!UBERON:0000349;1.73e-09;5!UBERON:0000010;8.51e-09;8!UBERON:0002021;8.76e-09;5!UBERON:0002037;3.05e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.86e-44,15;UBERON:0003057,3.86e-44,15;UBERON:0001016,1.47e-43,89;UBERON:0001049,8.34e-43,56;UBERON:0005068,8.34e-43,56;UBERON:0006241,8.34e-43,56;UBERON:0007135,8.34e-43,56;UBERON:0001017,4.10e-36,81;UBERON:0000073,2.12e-34,53;UBERON:0002616,2.12e-34,53;UBERON:0004733,6.96e-32,12;UBERON:0002028,6.96e-32,12;UBERON:0007277,6.96e-32,12;UBERON:0004732,2.61e-29,13;UBERON:0002298,9.41e-29,6;UBERON:0000955,3.63e-28,68;UBERON:0006238,3.63e-28,68;UBERON:0003075,1.14e-27,82;UBERON:0007284,1.14e-27,82;UBERON:0002346,3.82e-26,86;UBERON:0010371,5.59e-25,104;UBERON:0004121,3.33e-23,171;UBERON:0000924,3.33e-23,171;UBERON:0006601,3.33e-23,171;UBERON:0002680,1.25e-19,9;UBERON:0001895,1.25e-19,9;UBERON:0010092,1.25e-19,9;UBERON:0002619,9.49e-19,22;UBERON:0003528,3.20e-17,34;UBERON:0002020,3.20e-17,34;UBERON:0000956,2.26e-16,25;UBERON:0000203,2.26e-16,25;UBERON:0011216,4.01e-16,223;UBERON:0000988,1.78e-15,3;UBERON:0010314,3.24e-15,132;UBERON:0001896,4.70e-15,3;UBERON:0005290,4.70e-15,3;UBERON:0010096,4.70e-15,3;UBERON:0002240,1.87e-14,3;UBERON:0005174,1.87e-14,3;UBERON:0001137,1.87e-14,3;UBERON:0002780,1.02e-13,41;UBERON:0001890,1.02e-13,41;UBERON:0003080,1.02e-13,41;UBERON:0006240,1.02e-13,41;UBERON:0001950,4.86e-13,20;UBERON:0002791,1.65e-12,32;UBERON:0001869,1.65e-12,32;UBERON:0007023,3.42e-12,114;UBERON:0001893,1.09e-11,34;UBERON:0002148,3.68e-11,2;UBERON:0006331,3.68e-11,2;UBERON:0009662,3.68e-11,2;UBERON:0001954,4.27e-11,2;UBERON:0003022,4.27e-11,2;UBERON:0002421,4.27e-11,2;UBERON:0002600,4.27e-11,2;UBERON:0000349,1.64e-09,5;UBERON:0000025,7.68e-09,192;UBERON:0002021,7.74e-09,5;UBERON:0000010,8.09e-09,8;UBERON:0003056,1.57e-08,61;UBERON:0002037,3.09e-08,6;UBERON:0006215,3.09e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984968464614303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,1.14027160516907,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09315525111078,0,8.93114252314428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53204949538923,0,0,0,0,0,1.51159648712566,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,18.2713987817976,0.291604613383254,0,0,0,6.10326945268333,8.40402375477307,7.38869047383869,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.337005664903385,0,1.40558667435203,0,0,0,0,0,2.14250933141343,0,3.30711522711884,0.829505531177977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10148000107438,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36183751847443,4.63091580779357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,3.23207390903876,10.3141429359298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.751145584238999,5.73409195690071,2.3295100822739,1.73869928235874,3.04366996859708,0,0,0,0,2.81000943484129,7.24605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30497145982606,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,79.5502989508713,0,0,2.40261204022431,0,0,0,0,0,0,0,0,0,0,1.41696576325585,1.59633859057151,0.82046545696302,1.51243017733031,0.207471757392654,0.484426936895553,0,0.294443155503077,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.540300676947157,0,1.44680757550829,0.760989722326882,6.56369770821863,0,0,0.879356221798103,0,0,0,0,0,0,0,0,1.97112225632812,0.263091094251396,0,0,0,0,0,0,0,0,0.643288897589907,0,0,0.173858272302579,0,0,0.3414369541879,0,0,2.721636016803,1.44862788090568,0,0,0,0,0,0,0,0,0,0,0,15.440004588499,0.198950775161368,0,0,0,0,0,0,0,0,0,1.17785080268967,1.78227840196252,2.113278637917,0,0,0,0,0,0.352894871715692,0,0,0,0.286679166302903,0,0.203974470572744,3.49080552272302,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,2.48750831837634,0.413731983447581,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@NHLH2 | |||
}} |
Latest revision as of 08:15, 16 September 2015
Short description: | p1@NHLH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NHLH2_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 0bp_to_ENST00000320238, NM_005599, uc001efy.2_5end |
EntrezGene: | NHLH2 |
HGNC: | 7818 |
UniProt: | Q02577 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.48e-11 | 2 |
neural cell | 5.43e-08 | 25 |
Schwann cell | 3.32e-07 | 2 |