FFCP PHASE1:Hg19::chr1:154155646..154155673,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12012 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VU61 | |||
|association_with_transcript=0bp_to_ENST00000341372,ENST00000368533,ENST00000473036,uc009wor.2_5end | |||
|cluster_id=chr1:154155646..154155673,- | |||
|description=CAGE_peak_3_at_TPM3_5end | |||
|id=chr1:154155646..154155673,- | |||
|ontology_enrichment_celltype=CL:0000003!3.84e-35!722;CL:0000012!2.00e-33!682;CL:0000548!3.29e-33!679;CL:0000004!3.29e-33!679;CL:0000255!3.29e-33!679;CL:0000763!3.76e-31!112;CL:0000049!3.76e-31!112;CL:0000144!5.56e-30!625;CL:0002371!3.08e-28!591;CL:0000766!7.50e-26!76;CL:0000557!2.38e-22!71;CL:0000063!9.20e-22!578;CL:0002057!7.13e-21!42;CL:0000839!9.05e-21!70;CL:0002009!1.69e-20!65;CL:0002032!3.73e-20!165;CL:0000837!3.73e-20!165;CL:0002194!4.50e-20!63;CL:0000576!4.50e-20!63;CL:0000040!4.50e-20!63;CL:0000559!4.50e-20!63;CL:0000048!5.35e-20!430;CL:0000860!6.72e-20!45;CL:0000723!8.04e-20!436;CL:0000034!1.90e-19!444;CL:0000037!5.69e-19!172;CL:0000566!5.69e-19!172;CL:0000988!6.01e-19!182;CL:0000738!5.30e-15!140;CL:0000134!6.33e-14!358;CL:0000219!7.84e-13!390;CL:0002320!1.23e-12!365;CL:0002031!4.13e-11!124;CL:0002087!1.23e-10!119;CL:0000222!2.32e-10!119;CL:0002139!5.03e-10!24;CL:0000115!3.38e-09!35;CL:0000071!6.79e-09!18;CL:0002546!6.79e-09!18;CL:0002078!2.10e-07!44;CL:0000213!2.73e-07!57;CL:0000215!2.73e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-15;33!CL:0002057;2.19e-15;33!CL:0000576;7.13e-14;48!CL:0000473;4.76e-13;39!CL:0000234;4.76e-13;39!CL:0000766;8.75e-12;69!CL:0002139;5.03e-10;24!CL:0000763;1.16e-09;100!CL:0000071;6.93e-09;18!CL:0000115;1.13e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.58e-32,108;CL:0000049,1.58e-32,108;CL:0000766,1.53e-27,72;CL:0000557,6.24e-24,67;CL:0000839,2.88e-22,66;CL:0002009,4.36e-22,61;CL:0002194,1.12e-21,59;CL:0000576,1.12e-21,59;CL:0000040,1.12e-21,59;CL:0000559,1.12e-21,59;CL:0000860,7.13e-21,42;CL:0002057,7.13e-21,42;CL:0002032,8.22e-21,161;CL:0000837,8.22e-21,161;CL:0000473,9.08e-21,48;CL:0000234,9.08e-21,48;CL:0000037,1.42e-19,168;CL:0000048,2.02e-19,427;CL:0000723,3.04e-19,433;CL:0000988,4.84e-19,177;CL:0000034,7.14e-19,441;CL:0000738,1.35e-15,136;CL:0000134,1.64e-13,354;CL:0000219,2.00e-12,386;CL:0002320,3.06e-12,361;CL:0002031,1.27e-11,120;CL:0002087,3.79e-11,115;CL:0000222,1.17e-10,121;CL:0002139,5.03e-10,24;CL:0000115,9.60e-10,36;CL:0000071,6.79e-09,18;CL:0002546,6.79e-09,18;CL:0002078,7.08e-08,45;CL:0000213,1.01e-07,58;CL:0000215,1.01e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-15;42!CL:0000049;4.03e-09;108!CL:0002546;6.93e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.38e-27!216;UBERON:0002193!3.24e-26!112;UBERON:0002390!4.05e-24!102;UBERON:0003061!4.05e-24!102;UBERON:0002371!1.37e-22!80;UBERON:0001474!2.52e-22!86;UBERON:0004765!3.32e-19!101;UBERON:0001434!3.32e-19!101;UBERON:0002405!4.83e-19!115;UBERON:0002204!4.76e-18!167;UBERON:0004535!4.16e-12!110;UBERON:0000055!5.70e-12!69;UBERON:0002384!1.36e-11!375;UBERON:0002049!6.93e-11!79;UBERON:0007798!6.93e-11!79;UBERON:0001009!1.23e-10!113;UBERON:0001981!5.13e-10!60;UBERON:0007500!5.13e-10!60;UBERON:0004537!5.13e-10!60;UBERON:0006965!5.13e-10!60;UBERON:0000926!1.50e-09!448;UBERON:0004120!1.50e-09!448;UBERON:0006603!1.50e-09!448;UBERON:0001986!6.79e-09!18;UBERON:0004638!6.79e-09!18;UBERON:0004852!6.79e-09!18;UBERON:0000487!1.48e-08!22;UBERON:0001637!2.77e-08!42;UBERON:0003509!2.77e-08!42;UBERON:0004572!2.77e-08!42;UBERON:0004872!1.68e-07!84;UBERON:0003914!3.22e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.93e-09;18!UBERON:0001986;6.93e-09;18!UBERON:0004852;6.93e-09;18!UBERON:0000487;1.50e-08;22!UBERON:0007500;5.18e-08;56!UBERON:0001981;5.18e-08;56!UBERON:0004537;5.18e-08;56!UBERON:0000055;1.24e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.12e-27,108;UBERON:0003081,1.14e-26,203;UBERON:0002390,2.55e-25,98;UBERON:0003061,2.55e-25,98;UBERON:0002405,3.96e-24,93;UBERON:0002371,5.15e-24,76;UBERON:0001474,1.22e-23,82;UBERON:0004765,7.75e-21,90;UBERON:0001434,2.19e-18,100;UBERON:0002204,3.03e-17,167;UBERON:0000926,3.00e-13,315;UBERON:0004120,3.00e-13,315;UBERON:0006603,3.00e-13,315;UBERON:0000055,1.36e-12,68;UBERON:0004535,1.39e-12,109;UBERON:0002049,2.01e-11,78;UBERON:0007798,2.01e-11,78;UBERON:0002384,3.26e-11,371;UBERON:0001009,4.59e-11,112;UBERON:0007500,1.29e-10,59;UBERON:0001981,1.29e-10,59;UBERON:0004537,1.29e-10,59;UBERON:0006965,1.29e-10,59;UBERON:0004638,6.79e-09,18;UBERON:0001986,6.79e-09,18;UBERON:0004852,6.79e-09,18;UBERON:0000487,1.48e-08,22;UBERON:0001637,2.77e-08,42;UBERON:0003509,2.77e-08,42;UBERON:0004572,2.77e-08,42;UBERON:0004872,6.66e-08,83;UBERON:0003914,2.72e-07,117 | |||
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| |||
|short_description=p3@TPM3 | |||
}} |
Latest revision as of 08:27, 17 September 2015
Short description: | p3@TPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341372, ENST00000368533, ENST00000473036, uc009wor.2_5end |
EntrezGene: | TPM3 |
HGNC: | 12012 |
UniProt: | Q5VU61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.12e-27 | 108 |
lateral plate mesoderm | 1.14e-26 | 203 |
hematopoietic system | 2.55e-25 | 98 |
blood island | 2.55e-25 | 98 |
immune system | 3.96e-24 | 93 |
bone marrow | 5.15e-24 | 76 |
bone element | 1.22e-23 | 82 |
skeletal element | 7.75e-21 | 90 |
skeletal system | 2.19e-18 | 100 |
musculoskeletal system | 3.03e-17 | 167 |
mesoderm | 3.00e-13 | 315 |
mesoderm-derived structure | 3.00e-13 | 315 |
presumptive mesoderm | 3.00e-13 | 315 |
vessel | 1.36e-12 | 68 |
cardiovascular system | 1.39e-12 | 109 |
vasculature | 2.01e-11 | 78 |
vascular system | 2.01e-11 | 78 |
connective tissue | 3.26e-11 | 371 |
circulatory system | 4.59e-11 | 112 |
epithelial tube open at both ends | 1.29e-10 | 59 |
blood vessel | 1.29e-10 | 59 |
blood vasculature | 1.29e-10 | 59 |
vascular cord | 1.29e-10 | 59 |
blood vessel endothelium | 6.79e-09 | 18 |
endothelium | 6.79e-09 | 18 |
cardiovascular system endothelium | 6.79e-09 | 18 |
simple squamous epithelium | 1.48e-08 | 22 |
artery | 2.77e-08 | 42 |
arterial blood vessel | 2.77e-08 | 42 |
arterial system | 2.77e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 6.66e-08 | 83 |
epithelial tube | 2.72e-07 | 117 |