FFCP PHASE1:Hg19::chr1:211432810..211432817,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55758 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25594 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2K3 | |||
|association_with_transcript=35bp_to_ENST00000419091_5end | |||
|cluster_id=chr1:211432810..211432817,+ | |||
|description=CAGE_peak_9_at_RCOR3_5end | |||
|id=chr1:211432810..211432817,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.13e-07;1!CL:0000895;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,1.33e-07,1;CL:0000895,1.33e-07,1;CL:0002436,1.33e-07,1;CL:0002427,1.33e-07,1;CL:0002428,1.33e-07,1;CL:0002429,1.33e-07,1;CL:0002433,1.33e-07,1;CL:0002431,1.33e-07,1;CL:0002432,1.33e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002427;2.13e-07;1!UBERON:0001045;2.13e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,9.10e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.47e-08;1!UBERON:0001154;2.13e-07;1!UBERON:0001000;2.13e-07;1!UBERON:0001153;2.13e-07;1!UBERON:0009854;2.13e-07;1!UBERON:0005352;2.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,8.54e-08,1;UBERON:0001000,2.35e-07,1;UBERON:0005352,2.35e-07,1;UBERON:0001154,3.40e-07,1;UBERON:0001153,3.40e-07,1;UBERON:0001045,3.40e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.305653622991805,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0.426507697462265,0.293600439334847,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.515151135268373,0.290796477559129,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.689491361473237,0,1.35426486594342,0.564727018627814,0,0,0.918251677112708,0,0,0.989553900560148,0,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.600707571366025,0.32145117339416,0,0.59675003159727,0.365328307529268,1.75996244461323,0,0,0,1.20118796110804,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0.526768169550154,0.786839080455332,0,0.205601498999509,1.00311897234407,0,0,1.94826728407911,0.779873198196215,0,0,0.270803863765016,0,0,0.493313713811028,0.552700035571697,0.579606171470105,0.593146252648242,0.267540828089713,0,0.453237370790265,1.53288197440768,0,0,0.318565414324097,0.651083453856419,0,0.451725357233318,0.255973222308837,0,0.710331756132051,0.821127996921047,0.604820229674197,0.534880391567015,0.144824403882799,2.43806866313962,0,0,0.361439152384566,0.50133791063589,0.869079113764942,1.5905718941022,0,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0.364295288292542,0,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.17859945656816,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.529636723252875,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.302256294682921,0.508681776931463,0,0.272746120590835,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0.492434012174795,0,0.743155811443641,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.616339038092582,1.03664057770386,0.864719720501769,1.2624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.36669142910475,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.410952645100767,0,0.224170287987055,0.394061520403854,0.215627574859517,0.898401253958239,0,0,0,0.502548796003046,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0.391602314925481,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.512556597022804,0,0,0,0.308419387605311,0,0.164254312027618,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.459257792658427,0.182091168006717,0.393373244878272,0.451199612907412,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0.438519753291869,0.522870902049801,0,0.328014645699706,0,0.309123034943167,0.640986253728404,0.742585499285292,0.574265537996172,0,0,0.386682873168488,0,0.460511024178389,0.413509717453592,0.537101224341368,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0.318852545457645,0.199579371432817,0,0.423347165447766,0.324621940274555,0,0.456469358066384,0,2.50634477090067,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0.333698283423817,0.390776190804081,0,0,0.270455678475983,1.99843180798692,0,0.561421621224659,0.73254089635947,0.728163130497081,0.111443384277478,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0,0,0,0.211125408127993,0.398495976502139,1.10513566212459,0.503865495708552,0.306806047506464,0.123084805461069,0,0.269605053441981,0,0.511572370226872,0.690503839458535,0,2.22273980289274,0,0.556608588971108,0,0,0.262379999988587,0.724999575434793,0,0,0.472775363535873,0,0.291604613383254,0.347249989866585,0,0,0,0.884634079449797,0.295547618953547,0.87754158861589,0.21787692703798,0,0.538651809526579,0.341826167541004,0.69169171316418,0.0897576444097721,0.108647371922008,0.31900115973192,0.641183153813036,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0.158936578980379,0.210998064528027,0.163232808159148,0.141353071433941,0.216388639742091,0.995261931078505,0.442287822516696,0,0.593042257361244,0.370691816839509,0.626531697032732,0,0,0.234264445725339,0.547364367646998,0.586993856796269,0.242780379534093,1.18375320854817,0,0.91821828489147,0.126373159256976,0.450970258243478,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.293977192243133,0.174118413160805,0.698906672968121,0.171986032471617,0.0967563312890851,0.219267951258557,0.0821154570532092,0.290967049465258,0.176512253383001,0,0,0,0.316553979779393,0.195551382734803,0.160317640503067,0.640358984218058,0,0.144090417154106,0.458146384663663,0.514784993585894,0,0,0.235694034616795,0.951329442515298,0.523014231561666,0.203996435272644,0.866851769704557,0,0.410716136675979,0,0.429765441419957,0.262887354279314,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0.164831716762333,0,0,0.0846733320657845,0,0.136203406111576,0,0.275078873194468,0,0.449947783103001,0,0.303747783290123,0,0.630445658393585,0.262272940674991,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.511164065356265,0.113312091520126,0.439656701034247,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.747511887973863,0.314408610199332,0.414239055347196,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0.919036730290385,0.983617892129413,0.157054096250234,0.886068179966986,0.366078794705889,0.500763722825999,0,0.221858103073705,0.18628920882415,0.691743174681154,0.124980407962107,0.151649117541648,0.570930667089935,0,0,0.144921028610825,0.298509605773748,0.701139929541673,0.554805861502613,0.378806010550178,0.251567901752575,0,0.457680136793847,0,0.310874401165561,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0.545545977607678,0.322231671127465,0.464033759878494,0,0.400027764663154,0,1.01024846629776,1.26184898228651,0.192619830407303,0,0.260994291965212,0.226705925512272,0.926089897295336,0.244736704506468,0.358177682162975,0.308801447160972,0.438568099157414,0.353378291891762,0.192914038270915,0,0,0.345430341731199,0,0.414775308455192,0.584580926518165,0,0.163565394255844,0,0.245772908753719,0.211312123358627,0,0.320075189082423,0,1.13503190713367,0.920529751259204,0.139879507719444,0,0.127894371303652,0.646948868380091,0,0,0.169732529954025,1.06287460050841,0.495743057036009,0,0,0.23658523500376,0.80057074828547,0.352675943690684,0,0.192687675289379,0,0.319267718114302,1.23069818544453,0.252071696221718,0.414943514785307,0.161475645631851,0,0.196295437002051,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0.397832444232549,0.601682626794058,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.270150338473579,0.781078098613847,0.413373593002368,0.19024743058172,1.09394961803644,0,0,0.175871244359621,0,0,0.672567444437648,0,0.227662191351298,0.620916591138472,0.345701962667338,0,0.203909198930495,0.394636641377094,0.118193840883968,0.111231401892069,0.470958557103084,0.157115589916002,0.840816489941367,0.913158720509496,0.863710364874486,0.9555033757741,0.285906176706625,0.158013611732727,0.116241425368125,0.173858272302579,0,0.62164849248911,0.6828739083758,0,0,0,0.255640214277473,0.423387050190929,0,0,0,0.223710863595585,0.196300467230486,0.365753774946808,0,1.64260490969995,2.3196288626764,0.485710993059139,0.467878926924211,0.198950775161368,0.475680363110274,0.11294608203896,0,0,1.15761237161917,0,0.470317296361523,0.245148321753905,0.471353094203252,0,0.891139200981258,0.4226557275834,0.169927114687817,0.375935671919414,0.322289439867886,0.399764623699716,0,0,0,0.730336388246517,0.917458566809082,0.143339583151451,0.473314686579554,0.135982980381829,1.30905207102113,0.5290268405154,0.371995018166751,0,0,0.126166424835079,0,0.253397002022874,0.101988829741982,0.534434810531121,1.37842349302267,0,0.606229585745915,0,0.829169439458779,0.20686599172379,0.639701945702943,0,0.645889098360061,0.0620747142958579,0.112131862580613,0.25458863311266,0.202117188958219,1.52401723527873,0.684466602170562,0.26940821205835,0.286888821570705,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,0.977931553462932,0.813792356631477,0,0.201273793591026,0.320568492303233 | |||
|short_description=p9@RCOR3 | |||
}} |
Latest revision as of 22:37, 24 September 2015
Short description: | p9@RCOR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RCOR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000419091_5end |
EntrezGene: | RCOR3 |
HGNC: | 25594 |
UniProt: | Q9P2K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 1.33e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.33e-07 | 1 |
mature CD4 single-positive thymocyte | 1.33e-07 | 1 |
resting double-positive thymocyte | 1.33e-07 | 1 |
double-positive blast | 1.33e-07 | 1 |
CD69-positive double-positive thymocyte | 1.33e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.33e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.33e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 8.54e-08 | 1 |
vas deferens | 2.35e-07 | 1 |
spermatic cord | 2.35e-07 | 1 |
vermiform appendix | 3.40e-07 | 1 |
caecum | 3.40e-07 | 1 |
midgut | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 9.10e-08 | 1 |