FFCP PHASE1:Hg19::chr1:64058906..64058920,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5236 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8905 | |||
|TSSclassifier=strong | |||
|UniProt=F5H857 | |||
|association_with_transcript=0bp_to_ENST00000538673_5end | |||
|cluster_id=chr1:64058906..64058920,+ | |||
|description=CAGE_peak_5_at_PGM1_5end | |||
|id=chr1:64058906..64058920,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.89e-10!180;CL:0000136!3.13e-08!15;CL:0000680!5.07e-07!57;CL:0000056!5.07e-07!57;CL:0000355!5.07e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.64e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.95e-09,15;CL:0000680,2.60e-07,58;CL:0000056,2.60e-07,58;CL:0000355,2.60e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.92e-11!82;UBERON:0005256!4.03e-10!143;UBERON:0000914!8.08e-10!83;UBERON:0002329!8.08e-10!83;UBERON:0003077!8.08e-10!83;UBERON:0003059!8.08e-10!83;UBERON:0007282!8.08e-10!83;UBERON:0009618!8.08e-10!83;UBERON:0007285!8.08e-10!83;UBERON:0004290!1.88e-09!70;UBERON:0000481!2.49e-09!347;UBERON:0002100!3.21e-09!216;UBERON:0000475!4.24e-09!365;UBERON:0002385!4.67e-09!63;UBERON:0001015!4.67e-09!63;UBERON:0000383!4.67e-09!63;UBERON:0001134!1.82e-08!61;UBERON:0002036!1.82e-08!61;UBERON:0003082!1.82e-08!61;UBERON:0003104!3.87e-08!238;UBERON:0009142!3.87e-08!238;UBERON:0001013!2.41e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.66e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.75e-11,83;UBERON:0002329,1.25e-09,71;UBERON:0003059,1.25e-09,71;UBERON:0007282,1.25e-09,71;UBERON:0004290,1.25e-09,71;UBERON:0009618,1.25e-09,71;UBERON:0002385,1.29e-09,64;UBERON:0001015,1.29e-09,64;UBERON:0000383,1.29e-09,64;UBERON:0007503,2.29e-09,78;UBERON:0003077,3.00e-09,72;UBERON:0007285,3.00e-09,72;UBERON:0005256,3.27e-09,122;UBERON:0001134,6.06e-09,62;UBERON:0002036,6.06e-09,62;UBERON:0003082,6.06e-09,62;UBERON:0007524,6.96e-09,73;UBERON:0001013,2.16e-08,14;UBERON:0003104,2.13e-07,160;UBERON:0009142,2.13e-07,160;UBERON:0002100,3.90e-07,199 | |||
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| |||
|short_description=p5@PGM1 | |||
}} |
Latest revision as of 20:55, 18 September 2015
Short description: | p5@PGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PGM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538673_5end |
EntrezGene: | PGM1 |
HGNC: | 8905 |
UniProt: | F5H857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.95e-09 | 15 |
muscle precursor cell | 2.60e-07 | 58 |
myoblast | 2.60e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.75e-11 | 83 |
somite | 1.25e-09 | 71 |
presomitic mesoderm | 1.25e-09 | 71 |
presumptive segmental plate | 1.25e-09 | 71 |
dermomyotome | 1.25e-09 | 71 |
trunk paraxial mesoderm | 1.25e-09 | 71 |
muscle tissue | 1.29e-09 | 64 |
musculature | 1.29e-09 | 64 |
musculature of body | 1.29e-09 | 64 |
epithelial vesicle | 2.29e-09 | 78 |
paraxial mesoderm | 3.00e-09 | 72 |
presumptive paraxial mesoderm | 3.00e-09 | 72 |
trunk mesenchyme | 3.27e-09 | 122 |
skeletal muscle tissue | 6.06e-09 | 62 |
striated muscle tissue | 6.06e-09 | 62 |
myotome | 6.06e-09 | 62 |
dense mesenchyme tissue | 6.96e-09 | 73 |
adipose tissue | 2.16e-08 | 14 |
mesenchyme | 2.13e-07 | 160 |
entire embryonic mesenchyme | 2.13e-07 | 160 |
trunk | 3.90e-07 | 199 |