FFCP PHASE1:Hg19::chr1:94703118..94703184,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30207 | |||
|TSSclassifier=strong | |||
|UniProt=Q52LW3 | |||
|association_with_transcript=0bp_to_ENST00000260526_5end | |||
|cluster_id=chr1:94703118..94703184,- | |||
|coexpression_cluster_id=C4011 | |||
|description=CAGE_peak_1_at_ARHGAP29_5end | |||
|id=chr1:94703118..94703184,- | |||
|ontology_enrichment_celltype=CL:0000066!5.80e-15!254;CL:0000222!1.13e-14!119;CL:0000220!3.41e-14!246;CL:0002321!9.71e-14!248;CL:0002139!5.24e-12!24;CL:0002078!2.01e-10!44;CL:0000055!4.98e-10!180;CL:0000213!6.84e-09!57;CL:0000215!6.84e-09!57;CL:0000115!7.02e-09!35;CL:0000057!7.51e-09!75;CL:0000071!9.53e-09!18;CL:0002546!9.53e-09!18;CL:0000076!1.11e-07!62;CL:0002620!9.54e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.24e-12;24!CL:0000071;8.12e-09;18!CL:0000115;5.64e-08;36!CL:0002078;1.23e-07;45!CL:0002620;8.70e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.99e-15,121;CL:0000066,1.03e-14,253;CL:0002321,6.92e-14,250;CL:0002139,4.41e-12,24;CL:0002078,6.00e-11,45;CL:0000115,2.15e-09,36;CL:0000213,2.37e-09,58;CL:0000215,2.37e-09,58;CL:0000071,8.46e-09,18;CL:0002546,8.46e-09,18;CL:0000057,1.28e-08,76;CL:0000076,1.53e-07,63;CL:0002620,8.75e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002546;8.12e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!9.74e-29!312;UBERON:0000483!2.08e-27!309;UBERON:0000477!1.28e-23!286;UBERON:0000475!1.80e-23!365;UBERON:0000481!1.09e-20!347;UBERON:0004111!6.64e-20!241;UBERON:0000468!9.90e-20!659;UBERON:0000467!1.55e-18!625;UBERON:0000480!3.66e-18!626;UBERON:0002100!1.17e-17!216;UBERON:0003914!2.26e-16!118;UBERON:0002049!1.48e-15!79;UBERON:0007798!1.48e-15!79;UBERON:0000025!2.59e-15!194;UBERON:0005256!2.73e-15!143;UBERON:0003104!2.66e-14!238;UBERON:0009142!2.66e-14!238;UBERON:0000490!2.08e-13!138;UBERON:0002050!2.20e-12!605;UBERON:0005423!2.20e-12!605;UBERON:0000923!3.15e-12!604;UBERON:0005291!3.15e-12!604;UBERON:0006598!3.15e-12!604;UBERON:0002532!3.15e-12!604;UBERON:0000922!4.35e-12!612;UBERON:0004872!1.00e-11!84;UBERON:0000055!3.62e-11!69;UBERON:0001981!5.27e-10!60;UBERON:0007500!5.27e-10!60;UBERON:0004537!5.27e-10!60;UBERON:0006965!5.27e-10!60;UBERON:0000914!1.51e-09!83;UBERON:0002329!1.51e-09!83;UBERON:0003077!1.51e-09!83;UBERON:0003059!1.51e-09!83;UBERON:0007282!1.51e-09!83;UBERON:0009618!1.51e-09!83;UBERON:0007285!1.51e-09!83;UBERON:0004535!1.54e-09!110;UBERON:0001009!1.89e-09!113;UBERON:0000062!3.47e-09!511;UBERON:0001048!4.04e-09!168;UBERON:0006914!4.80e-09!25;UBERON:0000487!4.88e-09!22;UBERON:0000486!7.11e-09!82;UBERON:0001986!9.53e-09!18;UBERON:0004638!9.53e-09!18;UBERON:0004852!9.53e-09!18;UBERON:0000064!3.34e-08!219;UBERON:0004290!1.21e-07!70;UBERON:0003102!4.66e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;4.12e-09;25!UBERON:0000487;4.29e-09;22!UBERON:0004638;8.12e-09;18!UBERON:0001986;8.12e-09;18!UBERON:0004852;8.12e-09;18!UBERON:0002049;1.42e-07;75!UBERON:0007798;1.42e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.14e-28,309;UBERON:0000483,2.45e-27,306;UBERON:0004111,3.38e-20,240;UBERON:0003914,1.21e-16,117;UBERON:0002049,5.43e-16,78;UBERON:0007798,5.43e-16,78;UBERON:0000490,1.35e-15,148;UBERON:0003104,1.71e-15,160;UBERON:0009142,1.71e-15,160;UBERON:0000025,3.20e-15,192;UBERON:0002100,3.32e-15,199;UBERON:0004872,4.32e-12,83;UBERON:0000055,1.46e-11,68;UBERON:0005256,3.20e-11,122;UBERON:0007500,2.37e-10,59;UBERON:0001981,2.37e-10,59;UBERON:0004537,2.37e-10,59;UBERON:0006965,2.37e-10,59;UBERON:0000922,6.76e-10,592;UBERON:0004535,1.16e-09,109;UBERON:0001009,1.43e-09,112;UBERON:0006914,4.24e-09,25;UBERON:0000487,4.31e-09,22;UBERON:0005423,4.99e-09,581;UBERON:0000486,8.41e-09,83;UBERON:0004638,8.46e-09,18;UBERON:0001986,8.46e-09,18;UBERON:0004852,8.46e-09,18;UBERON:0007503,9.27e-09,78;UBERON:0010314,4.06e-08,132;UBERON:0001048,5.51e-08,160;UBERON:0007524,1.10e-07,73;UBERON:0002329,1.45e-07,71;UBERON:0003059,1.45e-07,71;UBERON:0007282,1.45e-07,71;UBERON:0004290,1.45e-07,71;UBERON:0009618,1.45e-07,71;UBERON:0003102,1.51e-07,99;UBERON:0003077,2.17e-07,72;UBERON:0007285,2.17e-07,72;UBERON:0002050,6.59e-07,564;UBERON:0004923,6.75e-07,66 | |||
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| |||
|short_description=p1@ARHGAP29 | |||
}} |
Latest revision as of 22:46, 19 September 2015
Short description: | p1@ARHGAP29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP29_5end |
Coexpression cluster: | C4011_clear_endometrial_Endothelial_serous_prostate_anaplastic_Renal |
Association with transcript: | 0bp_to_ENST00000260526_5end |
EntrezGene: | ARHGAP29 |
HGNC: | 30207 |
UniProt: | Q52LW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.99e-15 | 121 |
epithelial cell | 1.03e-14 | 253 |
embryonic cell | 6.92e-14 | 250 |
endothelial cell of vascular tree | 4.41e-12 | 24 |
meso-epithelial cell | 6.00e-11 | 45 |
endothelial cell | 2.15e-09 | 36 |
lining cell | 2.37e-09 | 58 |
barrier cell | 2.37e-09 | 58 |
blood vessel endothelial cell | 8.46e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.46e-09 | 18 |
fibroblast | 1.28e-08 | 76 |
squamous epithelial cell | 1.53e-07 | 63 |
skin fibroblast | 8.75e-07 | 23 |