FFCP PHASE1:Hg19::chr20:33872527..33872538,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3692 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6159 | |||
|TSSclassifier=strong | |||
|UniProt=P56537 | |||
|association_with_transcript=-9bp_to_ENST00000374436_5end | |||
|cluster_id=chr20:33872527..33872538,- | |||
|description=CAGE_peak_3_at_EIF6_5end | |||
|id=chr20:33872527..33872538,- | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-19!254;CL:0000223!5.61e-10!59;CL:0000548!1.77e-08!679;CL:0000004!1.77e-08!679;CL:0000255!1.77e-08!679;CL:0002321!2.60e-08!248;CL:0000012!7.00e-08!682;CL:0000220!8.39e-08!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-20,253;CL:0000223,3.32e-10,58;CL:0002321,6.50e-09,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.27e-18!143;DOID:14566!4.39e-17!239;DOID:162!3.84e-16!235;DOID:305!1.40e-13!106;DOID:7!9.17e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.44e-18,143;DOID:14566,6.14e-16,239;DOID:162,5.27e-15,235;DOID:305,9.00e-14,106;DOID:7,5.81e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.98e-09!169;UBERON:0000925!1.98e-09!169;UBERON:0006595!1.98e-09!169;UBERON:0003104!2.02e-09!238;UBERON:0009142!2.02e-09!238;UBERON:0001007!4.52e-08!155;UBERON:0001555!4.52e-08!155;UBERON:0007026!4.52e-08!155;UBERON:0002100!1.36e-07!216;UBERON:0000481!7.43e-07!347;UBERON:0004921!7.91e-07!129;UBERON:0004185!7.91e-07!129;UBERON:0000466!8.07e-07!126;UBERON:0005172!8.54e-07!55;UBERON:0005173!8.54e-07!55 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.37e-08,160;UBERON:0009142,4.37e-08,160;UBERON:0002100,4.59e-08,199;UBERON:0004119,6.05e-08,160;UBERON:0000925,6.05e-08,160;UBERON:0006595,6.05e-08,160;UBERON:0005172,3.33e-07,54;UBERON:0005173,3.33e-07,54;UBERON:0005177,6.64e-07,101;UBERON:0005911,8.31e-07,82;UBERON:0002417,8.42e-07,60;UBERON:0000916,8.42e-07,60;UBERON:0003929,8.84e-07,54 | |||
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| |||
|short_description=p3@EIF6 | |||
}} |
Latest revision as of 19:43, 15 September 2015
Short description: | p3@EIF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EIF6_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000374436_5end |
EntrezGene: | EIF6 |
HGNC: | 6159 |
UniProt: | P56537 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-20 | 253 |
endodermal cell | 3.32e-10 | 58 |
embryonic cell | 6.50e-09 | 250 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 4.37e-08 | 160 |
entire embryonic mesenchyme | 4.37e-08 | 160 |
trunk | 4.59e-08 | 199 |
endoderm-derived structure | 6.05e-08 | 160 |
endoderm | 6.05e-08 | 160 |
presumptive endoderm | 6.05e-08 | 160 |
abdomen element | 3.33e-07 | 54 |
abdominal segment element | 3.33e-07 | 54 |
trunk region element | 6.64e-07 | 101 |
endo-epithelium | 8.31e-07 | 82 |
abdominal segment of trunk | 8.42e-07 | 60 |
abdomen | 8.42e-07 | 60 |
gut epithelium | 8.84e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.44e-18 | 143 |
disease of cellular proliferation | 6.14e-16 | 239 |
cancer | 5.27e-15 | 235 |
carcinoma | 9.00e-14 | 106 |
disease of anatomical entity | 5.81e-07 | 39 |