FFCP PHASE1:Hg19::chr22:39052300..39052336,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=F5H1G0 | |||
|association_with_transcript=0bp_to_ENST00000355830,ENST00000466655,ENST00000544346_5end | |||
|cluster_id=chr22:39052300..39052336,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_3_at_LOC646851_5end | |||
|id=chr22:39052300..39052336,- | |||
|ontology_enrichment_celltype=CL:0002319!6.35e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.01e-15;5!CL:0000540;6.71e-13;6!CL:0000404;6.71e-13;6!CL:0002319;1.39e-09;25!CL:0000123;2.73e-07;2!CL:0000242;2.73e-07;2!CL:0002321;4.03e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.46e-16,5;CL:0000047,1.87e-13,8;CL:0000540,5.73e-13,6;CL:0000031,5.73e-13,6;CL:0000404,5.73e-13,6;CL:0002319,1.67e-09,25;CL:0000242,3.70e-07,2;CL:0000133,8.30e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;6.71e-13;6!UBERON:0009117;3.30e-11;10!UBERON:0005564;3.30e-11;10!UBERON:0010122;6.19e-08;2 | |||
|ontology_enrichment_disease=DOID:305!2.07e-12!106;DOID:0050687!3.25e-12!143;DOID:162!2.03e-08!235;DOID:14566!4.37e-08!239;DOID:1749!7.90e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.48e-26!82;UBERON:0005743!1.35e-23!86;UBERON:0000073!6.16e-23!94;UBERON:0001016!6.16e-23!94;UBERON:0001049!3.71e-22!57;UBERON:0005068!3.71e-22!57;UBERON:0006241!3.71e-22!57;UBERON:0007135!3.71e-22!57;UBERON:0000955!3.24e-20!69;UBERON:0006238!3.24e-20!69;UBERON:0002616!1.59e-17!59;UBERON:0002346!9.20e-16!90;UBERON:0002780!6.85e-15!41;UBERON:0001890!6.85e-15!41;UBERON:0006240!6.85e-15!41;UBERON:0003075!8.05e-15!86;UBERON:0007284!8.05e-15!86;UBERON:0003080!2.90e-14!42;UBERON:0000924!2.68e-13!173;UBERON:0006601!2.68e-13!173;UBERON:0002020!6.14e-13!34;UBERON:0003528!6.14e-13!34;UBERON:0001893!1.11e-12!34;UBERON:0004121!1.79e-12!169;UBERON:0002791!3.26e-12!33;UBERON:0000153!7.38e-12!129;UBERON:0007811!7.38e-12!129;UBERON:0000033!2.40e-11!123;UBERON:0001869!3.47e-11!32;UBERON:0003076!1.74e-09!15;UBERON:0003057!1.74e-09!15;UBERON:0003056!5.31e-09!61;UBERON:0007023!1.45e-08!115;UBERON:0000956!3.03e-08!25;UBERON:0000203!3.03e-08!25;UBERON:0004733!5.22e-08!12;UBERON:0002028!5.22e-08!12;UBERON:0007277!5.22e-08!12;UBERON:0004732!4.06e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.48e-14;53!UBERON:0002616;4.48e-14;53!UBERON:0002298;1.72e-13;6!UBERON:0000125;2.76e-12;9!UBERON:0002308;2.76e-12;9!UBERON:0001896;1.16e-10;3!UBERON:0005290;1.16e-10;3!UBERON:0002780;2.07e-10;41!UBERON:0001890;2.07e-10;41!UBERON:0000473;3.35e-10;8!UBERON:0003135;4.02e-10;11!UBERON:0004733;4.42e-09;12!UBERON:0002028;4.42e-09;12!UBERON:0002420;1.24e-08;9!UBERON:0007245;1.24e-08;9!UBERON:0010009;1.24e-08;9!UBERON:0010011;1.24e-08;9!UBERON:0000454;1.24e-08;9!UBERON:0004732;2.51e-08;13!UBERON:0000955;3.74e-08;68!UBERON:0000369;5.14e-08;4!UBERON:0002435;5.14e-08;4!UBERON:0000204;5.14e-08;4!UBERON:0001873;6.19e-08;2!UBERON:0003528;1.22e-07;34!UBERON:0002020;1.22e-07;34!UBERON:0009663;1.54e-07;7!UBERON:0001894;1.72e-07;7!UBERON:0000007;1.77e-07;2!UBERON:0001897;2.73e-07;2!UBERON:0002148;2.73e-07;2!UBERON:0006331;2.73e-07;2!UBERON:0009662;2.73e-07;2!UBERON:0010225;2.73e-07;2!UBERON:0001016;5.29e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-22,81;UBERON:0001016,2.02e-21,89;UBERON:0001049,3.49e-19,56;UBERON:0005068,3.49e-19,56;UBERON:0006241,3.49e-19,56;UBERON:0007135,3.49e-19,56;UBERON:0000073,1.54e-18,53;UBERON:0002616,1.54e-18,53;UBERON:0000955,1.04e-14,68;UBERON:0006238,1.04e-14,68;UBERON:0002298,1.03e-13,6;UBERON:0000125,3.51e-12,9;UBERON:0002308,3.51e-12,9;UBERON:0002780,1.57e-11,41;UBERON:0001890,1.57e-11,41;UBERON:0003080,1.57e-11,41;UBERON:0006240,1.57e-11,41;UBERON:0003075,1.65e-11,82;UBERON:0007284,1.65e-11,82;UBERON:0001896,8.57e-11,3;UBERON:0005290,8.57e-11,3;UBERON:0010096,8.57e-11,3;UBERON:0002346,9.61e-11,86;UBERON:0003135,3.82e-10,11;UBERON:0000473,4.25e-10,8;UBERON:0010371,4.59e-10,104;UBERON:0007023,5.78e-10,114;UBERON:0003076,1.41e-09,15;UBERON:0003057,1.41e-09,15;UBERON:0004121,1.46e-09,171;UBERON:0000924,1.46e-09,171;UBERON:0006601,1.46e-09,171;UBERON:0004733,2.99e-09,12;UBERON:0002028,2.99e-09,12;UBERON:0007277,2.99e-09,12;UBERON:0003528,1.61e-08,34;UBERON:0002020,1.61e-08,34;UBERON:0004732,1.76e-08,13;UBERON:0002420,1.78e-08,9;UBERON:0007245,1.78e-08,9;UBERON:0010009,1.78e-08,9;UBERON:0010011,1.78e-08,9;UBERON:0000454,1.78e-08,9;UBERON:0001873,6.23e-08,2;UBERON:0010122,6.23e-08,2;UBERON:0000369,7.63e-08,4;UBERON:0002435,7.63e-08,4;UBERON:0000204,7.63e-08,4;UBERON:0010082,7.63e-08,4;UBERON:0001894,1.09e-07,7;UBERON:0006222,1.09e-07,7;UBERON:0000007,1.17e-07,2;UBERON:0011216,1.29e-07,223;UBERON:0001897,1.78e-07,2;UBERON:0010225,1.78e-07,2;UBERON:0002148,1.96e-07,2;UBERON:0006331,1.96e-07,2;UBERON:0009662,1.96e-07,2;UBERON:0009663,2.26e-07,7;UBERON:0001893,5.12e-07,34;UBERON:0003056,8.26e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,2.0036519099174,0.547497700291537,1.38096903554283,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.296573126324121,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,1.70763188581434,3.71083351300159,2.20768491452085,1.45125477021519,1.26160425437814,2.91981887260664,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.695582429850461,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.513372145118994,1.27047312111232,0,2.31986643833309,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,1.33479313369527,0,0,0,0,0,0,0,0,0.728163130497081,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0.994147647766298,1.40669416410513,0.222617410045812,0.16480387422676,1.90012867315194,1.59398390600856,0,0.251932747854276,0.306806047506464,0,0,0.0898683511473268,0,1.02314474045374,0,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0.520855522170466,0.174919999992391,0,0.341380344856499,0.508507300585533,0.945550727071745,1.37897349296586,0,0,5.31444831488303,2.29133233388275,1.52581736317083,0.221158519862449,0.886642856860642,0.438770794307945,0.21787692703798,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.0897576444097721,0.325942115766024,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,1.30586246527318,0.706765357169704,0,0,0,0,0,0.123563938946503,0.104421949505455,3.16785325009182,0,0.234264445725339,0.182454789215666,0.978323094660449,0,0,0,0.30607276163049,0.126373159256976,2.1045278718029,0.414752765588989,0,0,0.313932918407225,0,1.42304773014896,0.138674673013139,0.867798691675654,0.293977192243133,0.69647365264322,1.92199335066233,0.171986032471617,0.19351266257817,0.438535902517113,0.246346371159628,0,0,0,0,0,0.316553979779393,2.34661659281764,0.160317640503067,0,0,0.576361668616424,1.03082936549324,2.05913997434357,0,0.124252535565433,0.471388069233591,0.271808412147228,0.104602846312333,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.295282444544246,0.338693328263138,0,1.36203406111576,1.44677833618517,2.47570985875021,1.66176135211674,0,0,0.364497339948148,0,0,0.314727528809989,0,0.179287339332845,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,2.71494208359256,1.45455861916959,0,0,0.961086713109252,3.77290332239198,1.24271716604159,0,0,0,0.638341257770182,0,0,0,0,2.19875734750328,0,0.122026264901963,0.751145584238999,3.44045517414043,3.43880059764242,1.8628920882415,0.138348634936231,0,0,0,0,2.34167452903441,1.1593682288866,0.298509605773748,0.233713309847224,0,0,0.754703705257725,0,0.228840068396924,0,0,0.147855149989634,0,0,0.465788870628778,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0.428883182749851,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,3.77438260454151,0.109209638192014,0,0.637724760305049,0.867550349813015,0,0,0.0788617450012534,0,0,0,1.02766760154335,0,0.319267718114302,0.205116364240755,0.504143392443436,0.0691572524642179,0.484426936895553,0,0.88332946650923,0.471878893390961,0,0,0,0,0.397832444232549,0.752103283492572,0,0,0.261906694481422,0.163771917510097,0,0.337687923091973,0,0.826747186004736,0.443910671357348,2.18789923607288,0,0,0.175871244359621,0,0,0,1.82089681270989,3.64259506162076,0.0887023701626388,0.115233987555779,0.342976018874837,0.475788130837822,0,0,0.111231401892069,0,0.942693539496011,0.280272163313789,0.913158720509496,0,0,0,0,0.581207126840626,0,0,0,0,0.691259661814092,0,0.236664001461131,0,0.423387050190929,0.4582137370881,0.31020638566432,0,0.671132590786754,0.196300467230486,0,0,0,0,0,0.233939463462106,0.596852325484105,0.237840181555137,0,0.219881033490858,2.11347980993343,0,0,3.76253837089218,0,0.707029641304878,0.196308467114945,0.297046400327086,1.2679671827502,0,0,0,0,0.357107877211315,0.352894871715692,0.641930933513346,0,0,1.29005624836306,0.157771562193185,0.203974470572744,0.872701380680755,0,0,0,0,1.13549782351571,1.74824915141913,0,1.1218771271618,3.47382626845229,0.643264296743914,1.50424523575425,3.41004141982077,13.3982065078089,1.65833887891756,2.48239190068549,1.0661699095049,0.952257725854961,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,3.08405483188508,0.665320713092027,0.569822880276821,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LOC646851 | |||
}} |
Latest revision as of 16:00, 24 September 2015
Short description: | p3@LOC646851 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC646851_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000355830, ENST00000466655, ENST00000544346_5end |
EntrezGene: | LOC646851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.46e-16 | 5 |
neuronal stem cell | 1.87e-13 | 8 |
neuron | 5.73e-13 | 6 |
neuroblast | 5.73e-13 | 6 |
electrically signaling cell | 5.73e-13 | 6 |
neural cell | 1.67e-09 | 25 |
Merkel cell | 3.70e-07 | 2 |
neurectodermal cell | 8.30e-07 | 59 |