FFCP PHASE1:Hg19::chr9:131191205..131191220,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:131191205..131191220,+
|short_description=p17@CERCAM
|description=CAGE_peak_17_at_CERCAM_5end
|association_with_transcript=0bp_to_BC011811_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51148 | |EntrezGene=51148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23723 | |HGNC=23723 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4B2 | |UniProt=Q5T4B2 | ||
|association_with_transcript=0bp_to_BC011811_5end | |||
|cluster_id=chr9:131191205..131191220,+ | |||
|description=CAGE_peak_17_at_CERCAM_5end | |||
|id=chr9:131191205..131191220,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.32e-11!180;CL:1000507!2.42e-10!12;CL:1000494!2.42e-10!12;CL:0000183!8.43e-10!59;CL:1000449!6.72e-09!16;CL:0000393!2.63e-08!60;CL:0000211!2.63e-08!60;CL:0000187!4.38e-08!54;CL:1000497!1.24e-07!18;CL:0002518!1.24e-07!18;CL:0002322!1.59e-07!5;CL:0000680!2.30e-07!57;CL:0000056!2.30e-07!57;CL:0000355!2.30e-07!57;CL:0000188!3.57e-07!9;CL:0002681!4.14e-07!13;CL:0002584!4.14e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000650;7.12e-14;2!CL:1000500;7.12e-14;2!CL:1000618;7.12e-14;2!CL:1001318;7.12e-14;2!CL:0002173;7.12e-14;2!CL:1000507;2.35e-10;10!CL:1000494;2.35e-10;10!CL:0000632;7.51e-10;3!CL:0000746;4.35e-09;3!CL:0002557;1.97e-07;1!CL:0002599;1.97e-07;1!CL:0002379;1.97e-07;1!CL:0000669;2.32e-07;4!CL:0000737;5.05e-07;4!CL:1000449;6.20e-07;15!CL:0000062;7.49e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,4.85e-14,2;CL:1000500,4.85e-14,2;CL:1000618,4.85e-14,2;CL:1001318,4.85e-14,2;CL:0002173,4.85e-14,2;CL:1000507,1.82e-10,10;CL:1000494,1.82e-10,10;CL:0000632,7.36e-10,3;CL:0000746,4.73e-09,3;CL:0000513,4.73e-09,3;CL:0002599,1.39e-07,1;CL:0002379,1.69e-07,1;CL:0000669,1.92e-07,4;CL:0002557,2.17e-07,1;CL:1000449,5.25e-07,15;CL:0000737,5.38e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;4.35e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.26e-19;8!DOID:8692;2.19e-09;31!DOID:1240;4.29e-09;39!DOID:3347;8.83e-08;1!DOID:3620;1.97e-07;1!DOID:3565;1.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.06e-19,8;DOID:1240,1.98e-09,39;DOID:8692,2.59e-09,31;DOID:3347,1.15e-07,1;DOID:3620,1.69e-07,1;DOID:3565,1.69e-07,1;DOID:2531,6.18e-07,51;DOID:0060083,6.18e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.42e-10!12;UBERON:0001231!2.42e-10!12;UBERON:0004810!2.42e-10!12;UBERON:0006555!8.36e-10!17;UBERON:0005103!8.36e-10!17;UBERON:0000083!8.36e-10!17;UBERON:0009201!8.36e-10!17;UBERON:0004819!8.36e-10!17;UBERON:0006553!8.36e-10!17;UBERON:0003074!8.36e-10!17;UBERON:0003060!8.36e-10!17;UBERON:0000080!4.23e-09!18;UBERON:0002120!4.23e-09!18;UBERON:0004875!4.23e-09!18;UBERON:0005721!4.23e-09!18;UBERON:0005754!4.23e-09!18;UBERON:0007297!4.23e-09!18;UBERON:0004211!6.72e-09!16;UBERON:0001285!6.72e-09!16;UBERON:0007684!6.72e-09!16;UBERON:0003220!6.72e-09!16;UBERON:0004208!6.72e-09!16;UBERON:0003886!5.95e-08!63;UBERON:0004876!6.57e-08!20;UBERON:0003887!2.11e-07!21;UBERON:0002113!3.49e-07!27;UBERON:0003918!3.49e-07!27;UBERON:0005095!3.49e-07!27;UBERON:0007687!3.49e-07!27;UBERON:0005256!4.02e-07!143;UBERON:0001225!4.14e-07!13;UBERON:0008987!4.14e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;7.12e-14;2!UBERON:0003838;7.12e-14;2!UBERON:0003586;7.12e-14;2!UBERON:0005169;7.12e-14;2!UBERON:0002321;7.12e-14;2!UBERON:0005215;7.12e-14;2!UBERON:0002303;7.12e-14;2!UBERON:0002319;7.12e-14;2!UBERON:0004211;2.35e-10;10!UBERON:0009773;2.35e-10;10!UBERON:0001231;2.35e-10;10!UBERON:0004810;2.35e-10;10!UBERON:0003891;2.32e-07;4!UBERON:0006555;6.20e-07;15!UBERON:0004819;6.20e-07;15!UBERON:0001285;6.20e-07;15!UBERON:0007684;6.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.85e-14,2;UBERON:0003838,4.85e-14,2;UBERON:0003586,4.85e-14,2;UBERON:0005169,4.85e-14,2;UBERON:0002321,4.85e-14,2;UBERON:0005215,4.85e-14,2;UBERON:0002303,4.85e-14,2;UBERON:0002319,4.85e-14,2;UBERON:0004810,1.82e-10,10;UBERON:0003891,1.92e-07,4;UBERON:0004211,5.25e-07,15;UBERON:0009773,5.25e-07,15;UBERON:0001231,5.25e-07,15;UBERON:0001285,5.25e-07,15;UBERON:0007684,5.25e-07,15;UBERON:0004208,5.25e-07,15 | |||
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| ||
|short_description=p17@CERCAM | |||
}} | }} |
Latest revision as of 19:40, 15 September 2015
Short description: | p17@CERCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CERCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC011811_5end |
EntrezGene: | CERCAM |
HGNC: | 23723 |
UniProt: | Q5T4B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 4.85e-14 | 2 |
kidney interstitial cell | 4.85e-14 | 2 |
juxtaglomerular complex cell | 4.85e-14 | 2 |
renal interstitial pericyte | 4.85e-14 | 2 |
extraglomerular mesangial cell | 4.85e-14 | 2 |
kidney tubule cell | 1.82e-10 | 10 |
nephron tubule epithelial cell | 1.82e-10 | 10 |
hepatic stellate cell | 7.36e-10 | 3 |
cardiac muscle cell | 4.73e-09 | 3 |
cardiac muscle myoblast | 4.73e-09 | 3 |
smooth muscle cell of the esophagus | 1.39e-07 | 1 |
meningothelial cell | 1.69e-07 | 1 |
pericyte cell | 1.92e-07 | 4 |
fibroblast of pulmonary artery | 2.17e-07 | 1 |
epithelial cell of nephron | 5.25e-07 | 15 |
striated muscle cell | 5.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 4.85e-14 | 2 |
abdominal segment connective tissue | 4.85e-14 | 2 |
trunk connective tissue | 4.85e-14 | 2 |
interstitial tissue | 4.85e-14 | 2 |
extraglomerular mesangium | 4.85e-14 | 2 |
kidney interstitium | 4.85e-14 | 2 |
juxtaglomerular apparatus | 4.85e-14 | 2 |
mesangium | 4.85e-14 | 2 |
nephron tubule epithelium | 1.82e-10 | 10 |
stroma | 1.92e-07 | 4 |
nephron epithelium | 5.25e-07 | 15 |
renal tubule | 5.25e-07 | 15 |
nephron tubule | 5.25e-07 | 15 |
nephron | 5.25e-07 | 15 |
uriniferous tubule | 5.25e-07 | 15 |
nephrogenic mesenchyme | 5.25e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.06e-19 | 8 |
leukemia | 1.98e-09 | 39 |
myeloid leukemia | 2.59e-09 | 31 |
osteosarcoma | 1.15e-07 | 1 |
central nervous system cancer | 1.69e-07 | 1 |
meningioma | 1.69e-07 | 1 |
hematologic cancer | 6.18e-07 | 51 |
immune system cancer | 6.18e-07 | 51 |