FFCP PHASE1:Hg19::chr2:12417696..12417715,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:12417696..12417715,- | |||
|coexpression_cluster_id=C1299 | |||
|description=CAGE_peak_at_chr2:12417696..12417715,- | |||
|id=chr2:12417696..12417715,- | |||
|ontology_enrichment_celltype=CL:0002274!8.41e-39!5;CL:0000457!8.41e-39!5;CL:0002191!8.41e-39!5;CL:0000097!8.41e-39!5;CL:0000831!8.41e-39!5;CL:0002028!8.41e-39!5;CL:0000763!5.37e-24!112;CL:0000049!5.37e-24!112;CL:0000163!1.53e-21!9;CL:0002032!3.46e-15!165;CL:0000837!3.46e-15!165;CL:0000037!2.00e-14!172;CL:0000566!2.00e-14!172;CL:0000988!1.94e-13!182;CL:0002557!9.91e-09!1;CL:0000839!2.11e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.78e-42;5!CL:0000163;1.44e-23;9!CL:0000763;3.25e-09;100!CL:0000988;7.17e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.12e-42,5;CL:0002028,3.12e-42,5;CL:0000163,1.14e-23,9;CL:0000763,2.29e-22,108;CL:0000049,2.29e-22,108;CL:0002032,1.45e-14,161;CL:0000837,1.45e-14,161;CL:0000037,6.76e-14,168;CL:0000988,4.09e-13,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.22e-35!8;DOID:8692!6.82e-29!31;DOID:1240!1.38e-22!39;DOID:2531!7.89e-17!51;DOID:0060083!7.89e-17!51;DOID:8552!2.82e-09!1;DOID:5662!9.17e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.80e-42;8!DOID:8692;2.20e-34;31!DOID:1240;1.25e-22;39!DOID:2531;1.12e-14;51!DOID:0060083;1.12e-14;51!DOID:8552;1.31e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.85e-42,8;DOID:8692,6.38e-34,31;DOID:1240,8.44e-27,39;DOID:2531,2.70e-20,51;DOID:0060083,2.70e-20,51;DOID:8552,1.23e-14,1;DOID:0050686,7.02e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,2.72950145441001,0.621984346622316,1.8735593944205,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12493582569533,1.23087398947712,0.270455678475983,0,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6593869104025,3.83512623049207,4.50943828930801,5.37029078322697,6.45162691262229,2.06617552674492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:12417696..12417715,- | |||
}} |
Latest revision as of 00:01, 29 July 2015
Short description: | p@chr2:12417696..12417715, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:12417696..12417715, - |
Coexpression cluster: | C1299_chronic_acute_chorionic_leukemia_choriocarcinoma_pancreatic_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.12e-42 | 5 |
basophil mast progenitor cell | 3.12e-42 | 5 |
endocrine cell | 1.14e-23 | 9 |
myeloid cell | 2.29e-22 | 108 |
common myeloid progenitor | 2.29e-22 | 108 |
hematopoietic oligopotent progenitor cell | 1.45e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-14 | 161 |
hematopoietic stem cell | 6.76e-14 | 168 |
hematopoietic cell | 4.09e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.85e-42 | 8 |
myeloid leukemia | 6.38e-34 | 31 |
leukemia | 8.44e-27 | 39 |
hematologic cancer | 2.70e-20 | 51 |
immune system cancer | 2.70e-20 | 51 |
chronic myeloid leukemia | 1.23e-14 | 1 |
organ system cancer | 7.02e-07 | 137 |