FFCP PHASE1:Mm9::chr10:26492294..26492321,+: Difference between revisions
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{{FFCP|EntrezGene=73910|HGNC=|UniProt=Q8K0Q5|association_with_transcript=0bp_to_NM_176837,uc007ese.1_5end|description=CAGE_peak_2_at_Arhgap18_5end|id=chr10:26492294..26492321,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.38e-16!59;UBERON:0000160!1.23e-14!43;UBERON:0004119!2.02e-11!130;UBERON:0000925!2.02e-11!130;UBERON:0006595!2.02e-11!130;UBERON:0001007!1.09e-10!128;UBERON:0001555!1.09e-10!128;UBERON:0007026!1.09e-10!128;UBERON:0004921!5.96e-10!126;UBERON:0004185!5.96e-10!126;UBERON:0000344!1.25e-07!15;UBERON:0004923!1.81e-07!24;UBERON:0004535!4.24e-07!23;UBERON:0001009!4.24e-07!23;UBERON:0004872!6.55e-07!33;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.01e-16,47;UBERON:0000160,3.57e-15,31;UBERON:0004119,3.73e-10,118;UBERON:0000925,3.73e-10,118;UBERON:0006595,3.73e-10,118;UBERON:0001007,1.84e-09,116;UBERON:0001555,1.84e-09,116;UBERON:0007026,1.84e-09,116;UBERON:0004921,9.17e-09,114;UBERON:0000344,1.25e-07,15;UBERON:0004923,1.81e-07,24;UBERON:0004535,4.24e-07,23;UBERON:0001009,4.24e-07,23;UBERON:0004872,6.55e-07,33;UBERON:0001242,9.52e-07,13;UBERON:0001262,9.52e-07,13;UBERON:0004786,9.52e-07,13|phase1_expression=6.56610273129655,32.8036883180999,31.394947517878,45.6720959073313,48.0859900748493,17.1236857350128,17.9881733258555,12.1375924035082,1.83025338797167,2.80877431586392,0.513653904676515,0.159544317990673,9.24483941628511,3.93391810885488,2.6648780945253,5.66930748691513,2.09868563438444,7.25562980323947,7.67840828192137,5.09267582157636,5.3577272795174,24.7234468490204,20.8959831311148,25.4387952241517,21.1056538581796,26.4146703492909,18.5227658348402,22.4090081993325,39.7148946663821,31.5037662199913,13.5255611499736,0,0,0,15.8868390863201,11.470190529736,13.6793468695787,10.8818223991596,10.1573594788094,8.37637990358077,14.1175557127443,12.9778642142105,9.71020706062307,36.0064899410151,30.2103255034153,17.6204882075214,1.56478268869608,3.05235218932625,1.5378032791413,1.74986909166855,2.51975558925653,0,4.19456515144341,7.25362142011344,10.7550015725588,13.6347501099052,6.01720223871389,7.73508138416164,1.41621522601718,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,2.8419204597844,0.898800331555214,1.92109152660777,1.34796496001021,1.4850653216486,1.47227472945967,1.14260393761521,0.883474163806454,3.1847607795888,1.72521847832825,1.83843757322004,4.40463523997555,3.57524546638526,1.38245879930619,1.58263545276233,1.55528994124096,2.6045668527838,1.67509799400829,1.68828783009504,3.66715794664344,5.89257170947335,3.70166370077668,2.23679334990361,5.83091688665517,9.44644501334819,23.7688880735376,4.30211938490693,0.679971333707751,6.47643829965381,4.54843492213368,7.6164570806547,11.0951091904084,15.3387290320252,10.1316541795119,10.6001872353102,4.92951969218382,8.98285341900225,7.64415719119937,0,5.84525810730278,6.84071636782766,4.04419556011827,10.1623652949963,13.2058320660058,28.797774978576,7.11289839741157,12.4830846107978,13.1450833435953,16.8809357418937,24.4584510842266,19.35265506477,15.3260879995312,11.2787498397531,7.07688441559899,5.82360659810673,7.28777010919299,5.33362778448744,22.3670113461747,2.04946557908083,2.72280718857492,31.1657607354481,18.8109745474295,7.19883277192089,12.7070227073065,2.39665023047716,5.03250663100489,3.26701315493447,3.12883776346098,2.30143911597297,2.70124457927428,2.43361894601636,8.24898847187562,9.45492976636707,8.59257378674494,63.1325567659422,5.07469727554544,3.67843367093557,5.40186389416048,5.72678307775717,5.44291993210623,5.38077625196369,4.8724896771059,21.4723797713383,2.80238390812695,7.56424320671277,6.33424046990216,6.1374805079721,10.2877482213471,9.75106066262066,8.0255033199098,5.17489093728082,6.31991868581911,7.97778512055617,10.7982129770325,13.4631752148076,21.3418714582798,22.1476335597048,24.6214525008619,29.3178705303632,27.9223474326155,26.5088697015465,24.681152928765,19.966873544786,15.3040660419537,17.5659186564632,11.4307021459657,10.5263990946239,15.8076083009556,14.091673969839,2.52347938276953,4.52780294468852,63.770825115873,25.1228038330367,7.03851226766272,10.9151235774406,19.8455890436024,31.4626298412414,29.5762798313678,22.6368495073945,43.1821446005506,28.8223170767019,33.4275827704358,33.2257308308722,32.1690743746548,40.44687338944,38.0402967779462,37.438559371821,1.89667900953082,7.19765629441292,7.88954149711563,9.9789150644204,9.11576689687841,10.2398297039865,13.5958554817153,16.8275568696746,11.4609071324204,12.3397163921801,5.33614728756868,5.83957870006329,4.91397487783007,7.42044970870017,7.30296436998611,9.16473207059184,8.14802725700543,6.61701116136864,9.56597837972709,11.5315793538994,21.5652309791032,18.6070473834252,15.2898459826135,10.6083128737787,17.7603439386693,13.0259750768109,10.9004382198297,6.253216588426,12.548303186036,9.50572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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73910 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0Q5 | |||
|association_with_transcript=0bp_to_NM_176837,uc007ese.1_5end | |||
|cluster_id=chr10:26492294..26492321,+ | |||
|description=CAGE_peak_2_at_Arhgap18_5end | |||
|id=chr10:26492294..26492321,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.38e-16!59;UBERON:0000160!1.23e-14!43;UBERON:0004119!2.02e-11!130;UBERON:0000925!2.02e-11!130;UBERON:0006595!2.02e-11!130;UBERON:0001007!1.09e-10!128;UBERON:0001555!1.09e-10!128;UBERON:0007026!1.09e-10!128;UBERON:0004921!5.96e-10!126;UBERON:0004185!5.96e-10!126;UBERON:0000344!1.25e-07!15;UBERON:0004923!1.81e-07!24;UBERON:0004535!4.24e-07!23;UBERON:0001009!4.24e-07!23;UBERON:0004872!6.55e-07!33;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.01e-16,47;UBERON:0000160,3.57e-15,31;UBERON:0004119,3.73e-10,118;UBERON:0000925,3.73e-10,118;UBERON:0006595,3.73e-10,118;UBERON:0001007,1.84e-09,116;UBERON:0001555,1.84e-09,116;UBERON:0007026,1.84e-09,116;UBERON:0004921,9.17e-09,114;UBERON:0000344,1.25e-07,15;UBERON:0004923,1.81e-07,24;UBERON:0004535,4.24e-07,23;UBERON:0001009,4.24e-07,23;UBERON:0004872,6.55e-07,33;UBERON:0001242,9.52e-07,13;UBERON:0001262,9.52e-07,13;UBERON:0004786,9.52e-07,13 | |||
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| |||
|short_description=p2@Arhgap18 | |||
}} |
Latest revision as of 22:23, 25 September 2015
Short description: | p2@Arhgap18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgap18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_176837, uc007ese.1_5end |
EntrezGene: | Arhgap18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.01e-16 | 47 |
intestine | 3.57e-15 | 31 |
endoderm-derived structure | 3.73e-10 | 118 |
endoderm | 3.73e-10 | 118 |
presumptive endoderm | 3.73e-10 | 118 |
digestive system | 1.84e-09 | 116 |
digestive tract | 1.84e-09 | 116 |
primitive gut | 1.84e-09 | 116 |
subdivision of digestive tract | 9.17e-09 | 114 |
mucosa | 1.25e-07 | 15 |
organ component layer | 1.81e-07 | 24 |
cardiovascular system | 4.24e-07 | 23 |
circulatory system | 4.24e-07 | 23 |
splanchnic layer of lateral plate mesoderm | 6.55e-07 | 33 |
intestinal mucosa | 9.52e-07 | 13 |
wall of intestine | 9.52e-07 | 13 |
gastrointestinal system mucosa | 9.52e-07 | 13 |