FFCP PHASE1:Hg19::chr2:3998213..3998216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:3998213..3998216,+ | |||
|coexpression_cluster_id=C604 | |||
|description=CAGE_peak_at_chr2:3998213..3998216,+ | |||
|id=chr2:3998213..3998216,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.37e-15!75;CL:0000055!4.70e-11!180;CL:0000723!3.65e-08!436;CL:0000034!1.31e-07!444;CL:0000048!2.18e-07!430;CL:0002334!2.43e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000632;3.06e-13;3!CL:0002616;8.93e-11;1!CL:0002174;2.38e-10;1!CL:0000501;2.38e-10;1!CL:0000197;6.48e-07;6!CL:0000098;6.48e-07;6!CL:0002167;6.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.47e-13,3;CL:0002616,8.95e-11,1;CL:0002174,2.50e-10,1;CL:0000501,2.50e-10,1;CL:0000136,5.58e-10,15;CL:0000197,6.29e-07,6;CL:0000098,6.29e-07,6;CL:0002167,6.29e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.11e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3369;2.38e-10;1!DOID:3571;2.38e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.19e-10,1;DOID:3571,2.08e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.25e-07!45;UBERON:0002416!1.25e-07!45;UBERON:0002097!3.97e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;3.92e-08;5!UBERON:0003688;4.73e-07;6!UBERON:0002358;4.73e-07;6!UBERON:0003684;4.73e-07;6!UBERON:0001178;4.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.63e-08,5;UBERON:0003688,5.75e-07,6;UBERON:0002358,5.75e-07,6;UBERON:0003684,5.75e-07,6;UBERON:0001178,5.75e-07,6 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,2.68176656656373,2.61701557230111,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0.529636723252875,4.58938593198102,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0.70296429550139,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,1.05166641234618,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.103052529238439,0.772921620136887,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.24782516918484,0.892144943985809,0.788512075169673,1.52283839490527,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,1.12264037773229,1.02511319404561,0,0.804269605718038,0,0.154209693802656,0.710246901252508,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,2.20368642781448,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0.767693373934002,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,0,0.987884678879706,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,1.28929632425987,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,0,0.228840068396924,0.756154618816195,0.15543720058278,0.295710299979268,0,0.899606224327209,0.155262956876259,0.829412415681711,0.265841714557995,0,1.05180326298053,0.761610424337591,0,0.363697318405119,0.107410557042488,1.85613503951397,1.59238355479446,0,1.03018711554838,1.34699795506368,0,0,0,0.260994291965212,0,1.85217979459067,0.244736704506468,0.179088841081487,0,2.19284049578707,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:3998213..3998216,+ | |||
}} |
Latest revision as of 10:05, 29 July 2015
Short description: | p@chr2:3998213..3998216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:3998213..3998216, + |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.47e-13 | 3 |
perirenal adipocyte cell | 8.95e-11 | 1 |
follicular cell of ovary | 2.50e-10 | 1 |
granulosa cell | 2.50e-10 | 1 |
fat cell | 5.58e-10 | 15 |
receptor cell | 6.29e-07 | 6 |
sensory epithelial cell | 6.29e-07 | 6 |
olfactory epithelial cell | 6.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
right ovary | 2.63e-08 | 5 |
omentum | 5.75e-07 | 6 |
peritoneum | 5.75e-07 | 6 |
abdominal cavity | 5.75e-07 | 6 |
visceral peritoneum | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.19e-10 | 1 |
liver cancer | 2.08e-10 | 1 |