FFCP PHASE1:Hg19::chr2:55020539..55020543,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:55020539..55020543,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr2:55020539..55020543,+ | |||
|id=chr2:55020539..55020543,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;8.17e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,4.53e-12,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;8.17e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.64e-34!57;UBERON:0005068!1.64e-34!57;UBERON:0006241!1.64e-34!57;UBERON:0007135!1.64e-34!57;UBERON:0001017!2.66e-30!82;UBERON:0002780!4.44e-30!41;UBERON:0001890!4.44e-30!41;UBERON:0006240!4.44e-30!41;UBERON:0005743!1.71e-29!86;UBERON:0002616!1.76e-29!59;UBERON:0000955!2.18e-29!69;UBERON:0006238!2.18e-29!69;UBERON:0003080!4.42e-29!42;UBERON:0000073!7.71e-29!94;UBERON:0001016!7.71e-29!94;UBERON:0001893!9.50e-29!34;UBERON:0002020!1.43e-28!34;UBERON:0003528!1.43e-28!34;UBERON:0002791!1.63e-27!33;UBERON:0001869!5.50e-27!32;UBERON:0003075!7.30e-26!86;UBERON:0007284!7.30e-26!86;UBERON:0002346!2.33e-25!90;UBERON:0003056!1.92e-21!61;UBERON:0000956!5.68e-21!25;UBERON:0000203!5.68e-21!25;UBERON:0002619!1.56e-20!22;UBERON:0007023!7.76e-20!115;UBERON:0000153!8.97e-19!129;UBERON:0007811!8.97e-19!129;UBERON:0001950!3.57e-18!20;UBERON:0000033!4.95e-18!123;UBERON:0000924!4.48e-16!173;UBERON:0006601!4.48e-16!173;UBERON:0004121!4.61e-16!169;UBERON:0002308!5.08e-09!9;UBERON:0000125!5.08e-09!9;UBERON:0000200!1.41e-08!6;UBERON:0001872!5.10e-08!5;UBERON:0002420!2.78e-07!9;UBERON:0007245!2.78e-07!9;UBERON:0010009!2.78e-07!9;UBERON:0010011!2.78e-07!9;UBERON:0000454!2.78e-07!9;UBERON:0009663!3.19e-07!7;UBERON:0000064!4.07e-07!219;UBERON:0002298!4.81e-07!8;UBERON:0003076!6.45e-07!15;UBERON:0003057!6.45e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;1.39e-33;5!UBERON:0001950;1.14e-23;20!UBERON:0002791;3.69e-23;32!UBERON:0001869;3.69e-23;32!UBERON:0001905;7.40e-22;2!UBERON:0002757;7.40e-22;2!UBERON:0010134;7.40e-22;2!UBERON:0005408;7.40e-22;2!UBERON:0001899;7.40e-22;2!UBERON:0002619;1.46e-21;22!UBERON:0002780;4.08e-21;41!UBERON:0001890;4.08e-21;41!UBERON:0003528;5.47e-20;34!UBERON:0002020;5.47e-20;34!UBERON:0001893;2.00e-19;34!UBERON:0000956;5.22e-19;25!UBERON:0000203;5.22e-19;25!UBERON:0000073;3.58e-16;53!UBERON:0002616;3.58e-16;53!UBERON:0000955;1.99e-12;68!UBERON:0002581;8.17e-12;1!UBERON:0002022;8.17e-12;1!UBERON:0001874;8.17e-12;1!UBERON:0003112;8.17e-12;1!UBERON:0011158;8.17e-12;1!UBERON:0003128;8.17e-12;1!UBERON:0001703;8.17e-12;1!UBERON:0002241;8.17e-12;1!UBERON:0003296;2.02e-11;4!UBERON:0010133;2.02e-11;4!UBERON:0002784;2.02e-11;4!UBERON:0001017;7.76e-10;75!UBERON:0001016;1.16e-08;83!UBERON:0000200;6.59e-08;6!UBERON:0001894;6.77e-07;7!UBERON:0009663;6.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,4.94e-33,5;UBERON:0002780,2.58e-28,41;UBERON:0001890,2.58e-28,41;UBERON:0003080,2.58e-28,41;UBERON:0006240,2.58e-28,41;UBERON:0000073,5.04e-26,53;UBERON:0002616,5.04e-26,53;UBERON:0001049,1.44e-24,56;UBERON:0005068,1.44e-24,56;UBERON:0006241,1.44e-24,56;UBERON:0007135,1.44e-24,56;UBERON:0002791,3.25e-24,32;UBERON:0001869,3.25e-24,32;UBERON:0001950,1.64e-23,20;UBERON:0003528,9.02e-23,34;UBERON:0002020,9.02e-23,34;UBERON:0001893,9.02e-23,34;UBERON:0001905,3.17e-22,2;UBERON:0002757,3.17e-22,2;UBERON:0010134,3.17e-22,2;UBERON:0005408,3.17e-22,2;UBERON:0001899,3.17e-22,2;UBERON:0002619,2.03e-21,22;UBERON:0000955,1.08e-19,68;UBERON:0006238,1.08e-19,68;UBERON:0001017,2.57e-19,81;UBERON:0000956,7.01e-19,25;UBERON:0000203,7.01e-19,25;UBERON:0003056,1.06e-18,61;UBERON:0001016,3.04e-17,89;UBERON:0003075,2.44e-16,82;UBERON:0007284,2.44e-16,82;UBERON:0002346,1.65e-15,86;UBERON:0007023,1.58e-13,114;UBERON:0010371,1.50e-12,104;UBERON:0002022,1.07e-11,1;UBERON:0003112,1.19e-11,1;UBERON:0011158,1.19e-11,1;UBERON:0003128,1.19e-11,1;UBERON:0001703,1.19e-11,1;UBERON:0002241,1.19e-11,1;UBERON:0004761,1.19e-11,1;UBERON:0009617,1.19e-11,1;UBERON:0001874,1.32e-11,1;UBERON:0003296,1.33e-11,4;UBERON:0010133,1.33e-11,4;UBERON:0002784,1.33e-11,4;UBERON:0002581,1.47e-11,1;UBERON:0010314,2.57e-11,132;UBERON:0004121,3.39e-08,171;UBERON:0000924,3.39e-08,171;UBERON:0006601,3.39e-08,171;UBERON:0011216,3.93e-08,223;UBERON:0000200,6.16e-08,6;UBERON:0000025,3.31e-07,192;UBERON:0001894,5.34e-07,7;UBERON:0006222,5.34e-07,7;UBERON:0009663,8.10e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.92960640696362,1.42169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.421352420106746,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0.508189248444927,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.495056999523528,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.48642540100575,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0.74214478529481,0,0,0.0874599999961957,0,0,0,0,2.06846023944879,0.583209226766509,0.520874984799877,0,0.361789315876224,0,0.995213339381022,3.25102380848902,0.219385397153973,0.21787692703798,0,0.0769502585037971,0,0,0.269272933229316,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0.104421949505455,0.202203398942031,0,0,0.547364367646998,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0,0,0.219267951258557,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.26961417541674,0,0.338693328263138,0.795229689809303,0.681017030557878,0,0,0,0,0,1.15424157650247,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0.427149650270779,0.157204305099666,0,0,0.395223263795889,10.3523708623762,0,0.544017803369474,0,0,0,0,1.77213635993397,0.244052529803926,0.3755727921195,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0.383683113910955,0,0,0.54604819096007,0,0,0,0,0,0.23658523500376,1.60114149657094,0,0,0.834979926253974,0,0.798169295285756,1.23069818544453,0.252071696221718,0.276629009856872,1.13032951942296,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,1.56215619722769,1.03343398250592,1.01465296310251,0.546974809018219,0,0,0.879356221798103,0,1.60710550763486,1.3451348888753,0,0.682986574053893,0,0,0,0.271878931907327,1.05236437700559,0,0.444925607568277,0,1.09980912941201,0,0,0,0,0.357382720883282,0.316027223465453,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0.467878926924211,0.994753875806841,0,0,0.219881033490858,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.128915775947154,0,0.178553938605658,0,0,0,0.917458566809082,0.286679166302903,0,0.407948941145488,0.872701380680755,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.20686599172379,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0.435433495793923,0.342233301085281,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:55020539..55020543,+ | |||
}} |
Latest revision as of 10:53, 29 July 2015
Short description: | p@chr2:55020539..55020543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:55020539..55020543, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.53e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.62e-12 | 1 |