FFCP PHASE1:Mm9::chr11:68200476..68200504,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18208|HGNC=|MCL_coexpression_id=911|UniProt=B0QZL0|association_with_transcript=9bp_to_ENSMUST00000135141_5end|description=CAGE_peak_1_at_Ntn1_5end|id=chr11:68200476..68200504,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!9.14e-10!43;UBERON:0000468!1.88e-07!333;UBERON:0001045!2.20e-07!13;UBERON:0001264!3.08e-07!12;UBERON:0003922!3.08e-07!12;UBERON:0002114!3.08e-07!12;UBERON:0003923!3.08e-07!12;UBERON:0003924!3.08e-07!12;UBERON:0003921!3.08e-07!12;UBERON:0004535!3.50e-07!23;UBERON:0001009!3.50e-07!23;UBERON:0007100!4.08e-07!18;UBERON:0000948!4.08e-07!18;UBERON:0005498!4.08e-07!18;UBERON:0004140!4.08e-07!18;UBERON:0009881!4.08e-07!18;UBERON:0004141!4.08e-07!18;UBERON:0003084!4.08e-07!18;UBERON:0007005!4.08e-07!18;UBERON:0004139!4.08e-07!18;UBERON:0004291!4.08e-07!18;UBERON:0000479!7.20e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.72e-09,43;UBERON:0001264,2.19e-07,12;UBERON:0007100,4.19e-07,18;UBERON:0000948,4.19e-07,18;UBERON:0005498,4.19e-07,18;UBERON:0004140,4.19e-07,18;UBERON:0009881,4.19e-07,18;UBERON:0004141,4.19e-07,18;UBERON:0003084,4.19e-07,18;UBERON:0007005,4.19e-07,18;UBERON:0004139,4.19e-07,18;UBERON:0004291,4.19e-07,18;UBERON:0004535,4.91e-07,23;UBERON:0001009,4.91e-07,23|phase1_expression=2.88267924788629,0,0,0,0,0.16787927191189,0,0.774739940649458,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,6.29320347117916,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,4.66333883609767,0.550640256485045,5.47673941043627,6.75877984779384,3.07560655828261,2.72201858703997,6.29938897314131,18.6878333674463,0,1.45072428402269,0,1.54355661621568,2.29226751951005,0.515672092277442,4.45096213891115,4.7609188134483,6.97214543856797,1.35537812827653,0.889294796111139,0.899899717281399,0,0,11.9840044207362,14.6002956022191,0.311068836925433,0.135005938331691,0.210324961351382,9.14083150092171,7.06779331045163,4.16468717330844,4.79227355091182,3.67687514644008,2.20231761998777,2.80912143787413,3.37934373163736,4.3522474950964,3.11057988248193,5.73004707612436,4.18774498502071,3.93933827022176,4.5839474333043,5.30331453852602,4.55589378557129,10.4383689662168,2.87759534666099,2.26714680320357,4.92769630792852,6.0229671388697,0,0,0,0,4.0728881838208,5.28333999991979,3.63700406444016,4.24007489412408,0.985903938436763,1.28326477414318,12.7402619853323,7.11066703153331,0.432982082022428,0.760079596425296,1.01104889002957,4.22480354960522,0,2.3750742250372,3.64319186208885,3.95805121805784,4.15107895060905,3.16517545160507,3.41007250693544,3.39299796590124,0.988779870937496,9.68815691363408,3.5384422077995,5.98537344805414,1.76673214768315,2.90925151881133,5.59175283654366,3.22058876712702,6.0739544975902,2.29911349687732,0,0,0,2.09706895166752,1.37250180845588,5.78010019719176,0.695297280769106,0.511430914660661,3.32460871295296,1.78465389374533,10.0820970211813,3.4833951770826,4.29628689337247,12.2056276414155,1.43132487258974,3.21862946206862,3.60124259610698,4.06903008156431,4.08218994907967,3.84341160854549,4.96619140166563,6.20888089773638,2.80238390812695,3.02569728268511,5.63043597324636,4.16471891612392,4.17070873838397,6.96504333044333,6.1734640922383,2.18937693500343,0,0,0,6.21377317606506,7.97388603935727,6.12211008967451,9.2330446878232,10.0349758191176,9.10175966035532,10.4640275137684,13.9502168727802,14.8291984806305,14.4812667923863,15.1034066952768,12.7278030986993,14.6199987425332,12.5143565715899,15.165325319922,0.630869845692382,2.05809224758569,1.32167513193519,1.85115396664481,3.41261200856374,3.71578674976702,5.54130083685001,3.83198696784351,2.66853652613844,4.75564065281398,7.11793592316767,2.63518327558417,4.52403375840485,6.36660710531683,4.874102177978,2.69645822596266,2.80979464837102,1.39398891278057,5.31070122668629,5.59817711787671,3.38123207019241,4.88763186828754,4.46090720485539,6.45249542990931,8.15751328902919,10.4803205065518,11.1469096767376,8.63780147452604,0.889357881261447,0.333690211432188,0.589676985339609,0,0,0,0.50925170356284,0.863088412352432,0.486405680325106,0.823684239564244,0,2.23284568601102,1.87222603868736,2.52578877947112,1.97337154874103,0.482443521363367,10.1614254591633,2.4633883530163,3.7481944581666,2.54617628662782,1.87752198630802,0.502518772325447,1.42826184531608,4.29294025287157,6.9359463406724,8.19419351700467,10.5240147313941,11.6342953448174,12.0879487306127,12.150520920847,0,0.54390568381871,9.34352118736169,6.07060841870411,2.72936002979246,3.7507739709505,0.491804836130026,7.06918596172244,1.89304931649754,1.17131623288992,2.80050417052639,2.62865677747807,5.56996685205985,6.22768367735431,2.02405350837447,1.75353514746787,1.97643888973262,2.24924921495265,2.83880170416537,4.80777129901589,9.28455668315384,7.9185659026817,29.2039304347918,3.64170954232472,4.83717691143602,9.8074641473067,13.5838870725155,11.9899707698132,8.26970538138308,12.7236805317127,17.4683715408513,25.2829406348653,21.0837217149998,24.7525303795648,1.36175842301515,3.6012218806262,2.71653235943784,1.92903331528433,3.01478397191865,2.85390108163313,2.13913726782757,4.26250928760439,9.62154003061212,4.66030555900404,2.42581237860458,4.61681508236144,9.84933002845024,8.50412241486998,7.5204576721976,7.2221995887827,5.53813589596716,4.07935664423121,0.512612642393558,2.27025554759545,0.925972636848558,0.941842285023455,0.27338845544205,0.686334519619568,0,0.279902904647316,0,1.90934123603023,3.79603192297362,7.9294592179471,8.3164112432787,6.48173717644853,4.80397640241591,7.01294601201068,6.28166263512553,8.37619014348895,7.12882353104861,6.83473244395618,0,0.747582730219894,1.82004339502807,0.388902376688095,1.16243841129958,0.337912250981556,1.40828686374905,3.1249052362548,1.46803082195995,0.966336483304024,2.30424005006292,1.58005560314089,1.41907650703115,0.513554785824136,0.649604114888975,1.07416017400489,0.596044064343795,0.600977247599844,0,0.403865799792591,0.457240839929999,0.504130925684203,0.38983152295901,1.05833025804362,1.05189211963412,5.8949899739955,0.443971906748129,0.269141569828427,0.167884616364078,6.95482538515886,7.3196165425961,9.34073283763052,4.07299920250225,0.501572104035363,0,0.920650473014354,0.572895513439397,1.03111909406213,0.685082519770642,0,2.70009000092722,1.80128481289688,0,0.51776031175182,0.726511433089237,6.3843979744165,4.43907374960749,4.86213434136588,1.46729213839588,1.47074806760011,4.00044110042907,3.7086310303001,4.1719497246936,5.05394423527595,3.54871019846336,4.90428487603798,3.09016974650612,5.50616310681876,4.42253110958222,2.85776214769844,4.05595140806994,2.70072908649187,6.1812885120496,3.97437084362873,3.08582327146874,4.2594193478241,3.81497903915713,3.48831399917588,4.14081273827455,4.73841804193388,4.75612729469209,1.57841826862706,5.56796866768033,3.36685362994643,3.55905054372522,3.64466584789585,2.86461730218783,3.71848418846318,4.62975866354739,6.74488560432454,4.21076895201735,6.23126056740065,7.65153328275374,6.61774257358547,5.10109238364927|short_description=p1@Ntn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18208 | |||
|HGNC= | |||
|MCL_coexpression_id=911 | |||
|TSSclassifier=NA | |||
|UniProt=B0QZL0 | |||
|association_with_transcript=9bp_to_ENSMUST00000135141_5end | |||
|cluster_id=chr11:68200476..68200504,- | |||
|description=CAGE_peak_1_at_Ntn1_5end | |||
|id=chr11:68200476..68200504,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!9.14e-10!43;UBERON:0000468!1.88e-07!333;UBERON:0001045!2.20e-07!13;UBERON:0001264!3.08e-07!12;UBERON:0003922!3.08e-07!12;UBERON:0002114!3.08e-07!12;UBERON:0003923!3.08e-07!12;UBERON:0003924!3.08e-07!12;UBERON:0003921!3.08e-07!12;UBERON:0004535!3.50e-07!23;UBERON:0001009!3.50e-07!23;UBERON:0007100!4.08e-07!18;UBERON:0000948!4.08e-07!18;UBERON:0005498!4.08e-07!18;UBERON:0004140!4.08e-07!18;UBERON:0009881!4.08e-07!18;UBERON:0004141!4.08e-07!18;UBERON:0003084!4.08e-07!18;UBERON:0007005!4.08e-07!18;UBERON:0004139!4.08e-07!18;UBERON:0004291!4.08e-07!18;UBERON:0000479!7.20e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.72e-09,43;UBERON:0001264,2.19e-07,12;UBERON:0007100,4.19e-07,18;UBERON:0000948,4.19e-07,18;UBERON:0005498,4.19e-07,18;UBERON:0004140,4.19e-07,18;UBERON:0009881,4.19e-07,18;UBERON:0004141,4.19e-07,18;UBERON:0003084,4.19e-07,18;UBERON:0007005,4.19e-07,18;UBERON:0004139,4.19e-07,18;UBERON:0004291,4.19e-07,18;UBERON:0004535,4.91e-07,23;UBERON:0001009,4.91e-07,23 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0.16787927191189,0,0.774739940649458,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,6.29320347117916,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,4.66333883609767,0.550640256485045,5.47673941043627,6.75877984779384,3.07560655828261,2.72201858703997,6.29938897314131,18.6878333674463,0,1.45072428402269,0,1.54355661621568,2.29226751951005,0.515672092277442,4.45096213891115,4.7609188134483,6.97214543856797,1.35537812827653,0.889294796111139,0.899899717281399,0,0,11.9840044207362,14.6002956022191,0.311068836925433,0.135005938331691,0.210324961351382,9.14083150092171,7.06779331045163,4.16468717330844,4.79227355091182,3.67687514644008,2.20231761998777,2.80912143787413,3.37934373163736,4.3522474950964,3.11057988248193,5.73004707612436,4.18774498502071,3.93933827022176,4.5839474333043,5.30331453852602,4.55589378557129,10.4383689662168,2.87759534666099,2.26714680320357,4.92769630792852,6.0229671388697,0,0,0,0,4.0728881838208,5.28333999991979,3.63700406444016,4.24007489412408,0.985903938436763,1.28326477414318,12.7402619853323,7.11066703153331,0.432982082022428,0.760079596425296,1.01104889002957,4.22480354960522,0,2.3750742250372,3.64319186208885,3.95805121805784,4.15107895060905,3.16517545160507,3.41007250693544,3.39299796590124,0.988779870937496,9.68815691363408,3.5384422077995,5.98537344805414,1.76673214768315,2.90925151881133,5.59175283654366,3.22058876712702,6.0739544975902,2.29911349687732,0,0,0,2.09706895166752,1.37250180845588,5.78010019719176,0.695297280769106,0.511430914660661,3.32460871295296,1.78465389374533,10.0820970211813,3.4833951770826,4.29628689337247,12.2056276414155,1.43132487258974,3.21862946206862,3.60124259610698,4.06903008156431,4.08218994907967,3.84341160854549,4.96619140166563,6.20888089773638,2.80238390812695,3.02569728268511,5.63043597324636,4.16471891612392,4.17070873838397,6.96504333044333,6.1734640922383,2.18937693500343,0,0,0,6.21377317606506,7.97388603935727,6.12211008967451,9.2330446878232,10.0349758191176,9.10175966035532,10.4640275137684,13.9502168727802,14.8291984806305,14.4812667923863,15.1034066952768,12.7278030986993,14.6199987425332,12.5143565715899,15.165325319922,0.630869845692382,2.05809224758569,1.32167513193519,1.85115396664481,3.41261200856374,3.71578674976702,5.54130083685001,3.83198696784351,2.66853652613844,4.75564065281398,7.11793592316767,2.63518327558417,4.52403375840485,6.36660710531683,4.874102177978,2.69645822596266,2.80979464837102,1.39398891278057,5.31070122668629,5.59817711787671,3.38123207019241,4.88763186828754,4.46090720485539,6.45249542990931,8.15751328902919,10.4803205065518,11.1469096767376,8.63780147452604,0.889357881261447,0.333690211432188,0.589676985339609,0,0,0,0.50925170356284,0.863088412352432,0.486405680325106,0.823684239564244,0,2.23284568601102,1.87222603868736,2.52578877947112,1.97337154874103,0.482443521363367,10.1614254591633,2.4633883530163,3.7481944581666,2.54617628662782,1.87752198630802,0.502518772325447,1.42826184531608,4.29294025287157,6.9359463406724,8.19419351700467,10.5240147313941,11.6342953448174,12.0879487306127,12.150520920847,0,0.54390568381871,9.34352118736169,6.07060841870411,2.72936002979246,3.7507739709505,0.491804836130026,7.06918596172244,1.89304931649754,1.17131623288992,2.80050417052639,2.62865677747807,5.56996685205985,6.22768367735431,2.02405350837447,1.75353514746787,1.97643888973262,2.24924921495265,2.83880170416537,4.80777129901589,9.28455668315384,7.9185659026817,29.2039304347918,3.64170954232472,4.83717691143602,9.8074641473067,13.5838870725155,11.9899707698132,8.26970538138308,12.7236805317127,17.4683715408513,25.2829406348653,21.0837217149998,24.7525303795648,1.36175842301515,3.6012218806262,2.71653235943784,1.92903331528433,3.01478397191865,2.85390108163313,2.13913726782757,4.26250928760439,9.62154003061212,4.66030555900404,2.42581237860458,4.61681508236144,9.84933002845024,8.50412241486998,7.5204576721976,7.2221995887827,5.53813589596716,4.07935664423121,0.512612642393558,2.27025554759545,0.925972636848558,0.941842285023455,0.27338845544205,0.686334519619568,0,0.279902904647316,0,1.90934123603023,3.79603192297362,7.9294592179471,8.3164112432787,6.48173717644853,4.80397640241591,7.01294601201068,6.28166263512553,8.37619014348895,7.12882353104861,6.83473244395618,0,0.747582730219894,1.82004339502807,0.388902376688095,1.16243841129958,0.337912250981556,1.40828686374905,3.1249052362548,1.46803082195995,0.966336483304024,2.30424005006292,1.58005560314089,1.41907650703115,0.513554785824136,0.649604114888975,1.07416017400489,0.596044064343795,0.600977247599844,0,0.403865799792591,0.457240839929999,0.504130925684203,0.38983152295901,1.05833025804362,1.05189211963412,5.8949899739955,0.443971906748129,0.269141569828427,0.167884616364078,6.95482538515886,7.3196165425961,9.34073283763052,4.07299920250225,0.501572104035363,0,0.920650473014354,0.572895513439397,1.03111909406213,0.685082519770642,0,2.70009000092722,1.80128481289688,0,0.51776031175182,0.726511433089237,6.3843979744165,4.43907374960749,4.86213434136588,1.46729213839588,1.47074806760011,4.00044110042907,3.7086310303001,4.1719497246936,5.05394423527595,3.54871019846336,4.90428487603798,3.09016974650612,5.50616310681876,4.42253110958222,2.85776214769844,4.05595140806994,2.70072908649187,6.1812885120496,3.97437084362873,3.08582327146874,4.2594193478241,3.81497903915713,3.48831399917588,4.14081273827455,4.73841804193388,4.75612729469209,1.57841826862706,5.56796866768033,3.36685362994643,3.55905054372522,3.64466584789585,2.86461730218783,3.71848418846318,4.62975866354739,6.74488560432454,4.21076895201735,6.23126056740065,7.65153328275374,6.61774257358547,5.10109238364927 | |||
|short_description=p1@Ntn1 | |||
}} |
Latest revision as of 23:13, 1 October 2015
Short description: | p1@Ntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:911 |
Association with transcript: | 9bp_to_ENSMUST00000135141_5end |
EntrezGene: | Ntn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 1.72e-09 | 43 |
pancreas | 2.19e-07 | 12 |
primary circulatory organ | 4.19e-07 | 18 |
heart | 4.19e-07 | 18 |
primitive heart tube | 4.19e-07 | 18 |
primary heart field | 4.19e-07 | 18 |
anterior lateral plate mesoderm | 4.19e-07 | 18 |
heart tube | 4.19e-07 | 18 |
heart primordium | 4.19e-07 | 18 |
cardiac mesoderm | 4.19e-07 | 18 |
cardiogenic plate | 4.19e-07 | 18 |
heart rudiment | 4.19e-07 | 18 |
cardiovascular system | 4.91e-07 | 23 |
circulatory system | 4.91e-07 | 23 |