FFCP PHASE1:Mm9::chr11:69140170..69140183,+: Difference between revisions
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{{FFCP|EntrezGene=16499|HGNC=|MCL_coexpression_id=20|UniProt=Q8VD73,Q8C439,Q8C7S9|association_with_transcript=410bp_to_ENSMUST00000018614,NM_010599,uc007jps.1_5end|description=CAGE_peak_4_at_Kcnab3_5end|id=chr11:69140170..69140183,+|ontology_enrichment_celltype=CL:0000117!3.51e-09!23;CL:0000337!3.51e-09!23;CL:0002610!1.43e-07!3;CL:0002614!2.13e-07!3|ontology_enrichment_celltype_v019_2=CL:0002610,5.88e-08,3;CL:0002614,8.07e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.58e-25!52;UBERON:0005068!6.58e-25!52;UBERON:0006241!6.58e-25!52;UBERON:0007135!6.58e-25!52;UBERON:0000955!1.66e-24!50;UBERON:0006238!1.66e-24!50;UBERON:0002616!6.84e-23!49;UBERON:0001017!1.85e-22!73;UBERON:0005743!1.85e-22!73;UBERON:0000073!1.18e-21!75;UBERON:0001016!1.18e-21!75;UBERON:0000033!1.20e-19!63;UBERON:0002346!7.68e-18!71;UBERON:0003075!7.68e-18!71;UBERON:0007284!7.68e-18!71;UBERON:0002020!2.03e-16!34;UBERON:0004121!4.76e-15!102;UBERON:0000924!4.76e-15!102;UBERON:0006601!4.76e-15!102;UBERON:0002298!6.03e-14!6;UBERON:0007811!1.10e-13!86;UBERON:0003080!1.21e-13!40;UBERON:0003076!1.59e-13!12;UBERON:0003057!1.59e-13!12;UBERON:0002780!3.02e-12!39;UBERON:0001890!3.02e-12!39;UBERON:0006240!3.02e-12!39;UBERON:0000153!6.25e-12!94;UBERON:0002791!9.09e-12!29;UBERON:0003528!9.09e-12!29;UBERON:0001893!9.09e-12!29;UBERON:0003056!1.29e-11!49;UBERON:0002021!3.45e-10!10;UBERON:0000411!3.45e-10!10;UBERON:0001950!3.45e-10!10;UBERON:0000025!3.59e-10!114;UBERON:0002950!1.31e-09!4;UBERON:0001891!1.31e-09!4;UBERON:0009616!1.31e-09!4;UBERON:0004111!4.90e-09!122;UBERON:0002240!1.16e-08!6;UBERON:0005174!1.16e-08!6;UBERON:0001137!1.16e-08!6;UBERON:0004684!1.43e-07!3;UBERON:0002275!1.43e-07!3;UBERON:0002038!2.13e-07!3;UBERON:0002308!2.13e-07!3;UBERON:0009663!2.13e-07!3;UBERON:0009661!2.13e-07!3;UBERON:0006331!2.13e-07!3;UBERON:0000125!2.13e-07!3;UBERON:0002619!4.61e-07!17;UBERON:0000956!5.64e-07!21;UBERON:0001869!5.64e-07!21;UBERON:0000203!5.64e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.88e-20,54;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001049,7.23e-18,52;UBERON:0005068,7.23e-18,52;UBERON:0006241,7.23e-18,52;UBERON:0007135,7.23e-18,52;UBERON:0000955,4.33e-17,47;UBERON:0006238,4.33e-17,47;UBERON:0002616,8.58e-15,46;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002950,1.49e-12,4;UBERON:0001891,1.49e-12,4;UBERON:0009616,1.49e-12,4;UBERON:0010286,1.49e-12,4;UBERON:0010371,3.59e-12,73;UBERON:0001896,5.57e-12,2;UBERON:0002298,5.57e-12,2;UBERON:0005290,5.57e-12,2;UBERON:0010096,5.57e-12,2;UBERON:0003076,6.48e-11,12;UBERON:0003057,6.48e-11,12;UBERON:0003080,1.85e-09,40;UBERON:0010314,3.06e-09,92;UBERON:0002020,7.80e-09,34;UBERON:0002021,1.27e-08,10;UBERON:0000411,1.27e-08,10;UBERON:0001950,1.27e-08,10;UBERON:0004733,1.36e-08,6;UBERON:0004732,1.36e-08,6;UBERON:0002028,1.36e-08,6;UBERON:0007277,1.36e-08,6;UBERON:0003528,3.78e-08,29;UBERON:0002791,3.78e-08,29;UBERON:0001893,3.78e-08,29;UBERON:0004684,5.88e-08,3;UBERON:0002275,5.88e-08,3;UBERON:0002038,8.07e-08,3;UBERON:0009663,8.07e-08,3;UBERON:0009661,8.07e-08,3;UBERON:0000125,8.07e-08,3;UBERON:0002308,8.07e-08,3;UBERON:0002780,1.33e-07,39;UBERON:0001890,1.33e-07,39;UBERON:0006240,1.33e-07,39;UBERON:0003056,1.66e-07,49;UBERON:0000025,4.68e-07,114;UBERON:0002259,6.50e-07,1;UBERON:0002314,6.50e-07,1;UBERON:0004061,6.50e-07,1;UBERON:0006777,6.50e-07,1;UBERON:0005882,6.50e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0,0,0,2.20231761998777,0.766124028511126,2.15049146558741,0,0,0.52091337055676,2.79182999001381,0.56276261003168,1.22238598221448,0,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,3.44518470631092,0.457500602818626,0,1.56441888173049,0.511430914660661,1.24672826735736,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.68741272937475,1.37016503954128,3.0215755895588,3.37511250115903,0.45032120322422,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Kcnab3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16499 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VD73,Q8C439,Q8C7S9 | |||
|association_with_transcript=410bp_to_ENSMUST00000018614,NM_010599,uc007jps.1_5end | |||
|cluster_id=chr11:69140170..69140183,+ | |||
|description=CAGE_peak_4_at_Kcnab3_5end | |||
|id=chr11:69140170..69140183,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.51e-09!23;CL:0000337!3.51e-09!23;CL:0002610!1.43e-07!3;CL:0002614!2.13e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.88e-08,3;CL:0002614,8.07e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.58e-25!52;UBERON:0005068!6.58e-25!52;UBERON:0006241!6.58e-25!52;UBERON:0007135!6.58e-25!52;UBERON:0000955!1.66e-24!50;UBERON:0006238!1.66e-24!50;UBERON:0002616!6.84e-23!49;UBERON:0001017!1.85e-22!73;UBERON:0005743!1.85e-22!73;UBERON:0000073!1.18e-21!75;UBERON:0001016!1.18e-21!75;UBERON:0000033!1.20e-19!63;UBERON:0002346!7.68e-18!71;UBERON:0003075!7.68e-18!71;UBERON:0007284!7.68e-18!71;UBERON:0002020!2.03e-16!34;UBERON:0004121!4.76e-15!102;UBERON:0000924!4.76e-15!102;UBERON:0006601!4.76e-15!102;UBERON:0002298!6.03e-14!6;UBERON:0007811!1.10e-13!86;UBERON:0003080!1.21e-13!40;UBERON:0003076!1.59e-13!12;UBERON:0003057!1.59e-13!12;UBERON:0002780!3.02e-12!39;UBERON:0001890!3.02e-12!39;UBERON:0006240!3.02e-12!39;UBERON:0000153!6.25e-12!94;UBERON:0002791!9.09e-12!29;UBERON:0003528!9.09e-12!29;UBERON:0001893!9.09e-12!29;UBERON:0003056!1.29e-11!49;UBERON:0002021!3.45e-10!10;UBERON:0000411!3.45e-10!10;UBERON:0001950!3.45e-10!10;UBERON:0000025!3.59e-10!114;UBERON:0002950!1.31e-09!4;UBERON:0001891!1.31e-09!4;UBERON:0009616!1.31e-09!4;UBERON:0004111!4.90e-09!122;UBERON:0002240!1.16e-08!6;UBERON:0005174!1.16e-08!6;UBERON:0001137!1.16e-08!6;UBERON:0004684!1.43e-07!3;UBERON:0002275!1.43e-07!3;UBERON:0002038!2.13e-07!3;UBERON:0002308!2.13e-07!3;UBERON:0009663!2.13e-07!3;UBERON:0009661!2.13e-07!3;UBERON:0006331!2.13e-07!3;UBERON:0000125!2.13e-07!3;UBERON:0002619!4.61e-07!17;UBERON:0000956!5.64e-07!21;UBERON:0001869!5.64e-07!21;UBERON:0000203!5.64e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.88e-20,54;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001049,7.23e-18,52;UBERON:0005068,7.23e-18,52;UBERON:0006241,7.23e-18,52;UBERON:0007135,7.23e-18,52;UBERON:0000955,4.33e-17,47;UBERON:0006238,4.33e-17,47;UBERON:0002616,8.58e-15,46;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002950,1.49e-12,4;UBERON:0001891,1.49e-12,4;UBERON:0009616,1.49e-12,4;UBERON:0010286,1.49e-12,4;UBERON:0010371,3.59e-12,73;UBERON:0001896,5.57e-12,2;UBERON:0002298,5.57e-12,2;UBERON:0005290,5.57e-12,2;UBERON:0010096,5.57e-12,2;UBERON:0003076,6.48e-11,12;UBERON:0003057,6.48e-11,12;UBERON:0003080,1.85e-09,40;UBERON:0010314,3.06e-09,92;UBERON:0002020,7.80e-09,34;UBERON:0002021,1.27e-08,10;UBERON:0000411,1.27e-08,10;UBERON:0001950,1.27e-08,10;UBERON:0004733,1.36e-08,6;UBERON:0004732,1.36e-08,6;UBERON:0002028,1.36e-08,6;UBERON:0007277,1.36e-08,6;UBERON:0003528,3.78e-08,29;UBERON:0002791,3.78e-08,29;UBERON:0001893,3.78e-08,29;UBERON:0004684,5.88e-08,3;UBERON:0002275,5.88e-08,3;UBERON:0002038,8.07e-08,3;UBERON:0009663,8.07e-08,3;UBERON:0009661,8.07e-08,3;UBERON:0000125,8.07e-08,3;UBERON:0002308,8.07e-08,3;UBERON:0002780,1.33e-07,39;UBERON:0001890,1.33e-07,39;UBERON:0006240,1.33e-07,39;UBERON:0003056,1.66e-07,49;UBERON:0000025,4.68e-07,114;UBERON:0002259,6.50e-07,1;UBERON:0002314,6.50e-07,1;UBERON:0004061,6.50e-07,1;UBERON:0006777,6.50e-07,1;UBERON:0005882,6.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.10434270475807,0,0,0,2.20231761998777,0.766124028511126,2.15049146558741,0,0,0.52091337055676,2.79182999001381,0.56276261003168,1.22238598221448,0,0.569486723196412,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,3.44518470631092,0.457500602818626,0,1.56441888173049,0.511430914660661,1.24672826735736,0.811206315338788,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.68741272937475,1.37016503954128,3.0215755895588,3.37511250115903,0.45032120322422,0,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Kcnab3 | |||
}} |
Latest revision as of 23:56, 1 October 2015
Short description: | p4@Kcnab3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnab3_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 410bp_to_ENSMUST00000018614, NM_010599, uc007jps.1_5end |
EntrezGene: | Kcnab3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.88e-08 | 3 |
neuron of the substantia nigra | 8.07e-08 | 3 |