FFCP PHASE1:Mm9::chr11:71563416..71563439,+: Difference between revisions
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{{FFCP|EntrezGene=216881|HGNC=|UniProt=B1AUZ4|association_with_transcript=0bp_to_ENSMUST00000150531_5end|description=CAGE_peak_3_at_Wscd1_5end|id=chr11:71563416..71563439,+|ontology_enrichment_celltype=CL:0000117!1.29e-16!23;CL:0000337!1.29e-16!23;CL:0000221!1.33e-13!44;CL:0000133!1.33e-13!44;CL:0002319!1.38e-13!43;CL:0000540!3.78e-12!33;CL:0000047!3.78e-12!33;CL:0000031!3.78e-12!33;CL:0000404!3.78e-12!33;CL:0000055!9.92e-10!50;CL:0000393!1.48e-08!39;CL:0000211!1.48e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-24,23;CL:0000337,1.39e-24,23;CL:0000540,5.75e-16,33;CL:0000047,5.75e-16,33;CL:0000031,5.75e-16,33;CL:0000404,5.75e-16,33;CL:0002319,5.08e-15,43;CL:0000221,1.40e-14,44;CL:0000133,1.40e-14,44;CL:0000393,6.31e-13,39;CL:0000211,6.31e-13,39;CL:0002610,1.02e-08,3;CL:0000120,2.14e-08,3;CL:0002321,1.33e-07,70;CL:0002614,1.39e-07,3;CL:0002613,3.74e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.39e-18!73;UBERON:0005743!6.39e-18!73;UBERON:0000073!1.87e-17!75;UBERON:0001016!1.87e-17!75;UBERON:0004121!3.72e-15!102;UBERON:0000924!3.72e-15!102;UBERON:0006601!3.72e-15!102;UBERON:0000033!4.09e-13!63;UBERON:0001049!4.87e-13!52;UBERON:0005068!4.87e-13!52;UBERON:0006241!4.87e-13!52;UBERON:0007135!4.87e-13!52;UBERON:0002346!6.84e-13!71;UBERON:0003075!6.84e-13!71;UBERON:0007284!6.84e-13!71;UBERON:0007811!7.90e-13!86;UBERON:0000955!6.82e-12!50;UBERON:0006238!6.82e-12!50;UBERON:0002616!2.81e-11!49;UBERON:0000153!4.69e-11!94;UBERON:0002020!1.57e-10!34;UBERON:0003056!1.15e-09!49;UBERON:0003076!5.94e-08!12;UBERON:0003057!5.94e-08!12;UBERON:0002791!2.37e-07!29;UBERON:0003528!2.37e-07!29;UBERON:0001893!2.37e-07!29;UBERON:0003080!3.21e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-24,73;UBERON:0001016,1.25e-23,75;UBERON:0004121,2.14e-23,95;UBERON:0000924,2.14e-23,95;UBERON:0006601,2.14e-23,95;UBERON:0000073,5.03e-19,54;UBERON:0002346,6.65e-18,64;UBERON:0003075,6.65e-18,64;UBERON:0007284,6.65e-18,64;UBERON:0003076,7.86e-16,12;UBERON:0003057,7.86e-16,12;UBERON:0001049,8.97e-16,52;UBERON:0005068,8.97e-16,52;UBERON:0006241,8.97e-16,52;UBERON:0007135,8.97e-16,52;UBERON:0010371,5.51e-15,73;UBERON:0002420,6.14e-13,8;UBERON:0007245,6.14e-13,8;UBERON:0010009,6.14e-13,8;UBERON:0010011,6.14e-13,8;UBERON:0000454,6.14e-13,8;UBERON:0002240,8.32e-11,6;UBERON:0005174,8.32e-11,6;UBERON:0001137,8.32e-11,6;UBERON:0000955,1.02e-10,47;UBERON:0006238,1.02e-10,47;UBERON:0010314,1.03e-10,92;UBERON:0002950,1.04e-09,4;UBERON:0001891,1.04e-09,4;UBERON:0009616,1.04e-09,4;UBERON:0010286,1.04e-09,4;UBERON:0002616,1.39e-09,46;UBERON:0002020,4.12e-09,34;UBERON:0001948,5.46e-09,5;UBERON:0002315,5.46e-09,5;UBERON:0004684,1.02e-08,3;UBERON:0002275,1.02e-08,3;UBERON:0003056,1.52e-08,49;UBERON:0002038,1.39e-07,3;UBERON:0009663,1.39e-07,3;UBERON:0009661,1.39e-07,3;UBERON:0000125,1.39e-07,3;UBERON:0002308,1.39e-07,3;UBERON:0000369,3.63e-07,5;UBERON:0002435,3.63e-07,5;UBERON:0000204,3.63e-07,5;UBERON:0010082,3.63e-07,5;UBERON:0011216,6.33e-07,194;UBERON:0004733,8.29e-07,6;UBERON:0004732,8.29e-07,6;UBERON:0002028,8.29e-07,6;UBERON:0007277,8.29e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,5.75010257459886,0,0,0,0,0,0,2.42779753031517,2.64495489636016,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,2.30530983192933,0.725827286159344,0.540023753326763,0.420649922702764,3.71346279724945,3.09215957332259,0.61245399607477,0.575072826109418,0.919218786610021,3.30347642998166,2.55374676170375,3.07213066512487,1.05509030184155,1.55528994124096,1.56274011167028,1.67509799400829,1.12552522006336,2.59757021220577,2.94628585473668,2.70506193518296,0.745597783301202,0,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,2.09706895166752,0.915001205637253,1.25654352112864,1.21677024134594,0.767146371990992,3.32460871295296,2.10913641988085,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,1.56483948048054,1.15302348256365,1.68663104207512,1.81092359517311,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.710234206755631,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,1.68231958851302,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0.58489226135736,0,0,0,0,0,0,0,0.581857461502877,0.210407459670956,0.822074982615345,0.442830443938806,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,2.0871576698413,3.6335622843583,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0.809621403349789,0,0.395287777946524,1.92792789853084,0,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0.39736270956253,0.841368146639782,0.295379054349154,1.00966449948148,1.295515713135,1.51239277705261,0.779663045918019,0.481059208201647,0.584384510907845,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0.906284817968409,0,0,0.798049746802062,0.512200817262403,0,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.384150914429216,0.34461281373368,0.476293691283074,0.695305955669133,0,0,0.588795680537589,0.342869252385415,0.177475806159338,0.953744759789284,0.436039249896986,0.0941093804153306,0.25384382367503,0.73171189149109,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p3@Wscd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216881 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=B1AUZ4 | |||
|association_with_transcript=0bp_to_ENSMUST00000150531_5end | |||
|cluster_id=chr11:71563416..71563439,+ | |||
|description=CAGE_peak_3_at_Wscd1_5end | |||
|id=chr11:71563416..71563439,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-16!23;CL:0000337!1.29e-16!23;CL:0000221!1.33e-13!44;CL:0000133!1.33e-13!44;CL:0002319!1.38e-13!43;CL:0000540!3.78e-12!33;CL:0000047!3.78e-12!33;CL:0000031!3.78e-12!33;CL:0000404!3.78e-12!33;CL:0000055!9.92e-10!50;CL:0000393!1.48e-08!39;CL:0000211!1.48e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-24,23;CL:0000337,1.39e-24,23;CL:0000540,5.75e-16,33;CL:0000047,5.75e-16,33;CL:0000031,5.75e-16,33;CL:0000404,5.75e-16,33;CL:0002319,5.08e-15,43;CL:0000221,1.40e-14,44;CL:0000133,1.40e-14,44;CL:0000393,6.31e-13,39;CL:0000211,6.31e-13,39;CL:0002610,1.02e-08,3;CL:0000120,2.14e-08,3;CL:0002321,1.33e-07,70;CL:0002614,1.39e-07,3;CL:0002613,3.74e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.39e-18!73;UBERON:0005743!6.39e-18!73;UBERON:0000073!1.87e-17!75;UBERON:0001016!1.87e-17!75;UBERON:0004121!3.72e-15!102;UBERON:0000924!3.72e-15!102;UBERON:0006601!3.72e-15!102;UBERON:0000033!4.09e-13!63;UBERON:0001049!4.87e-13!52;UBERON:0005068!4.87e-13!52;UBERON:0006241!4.87e-13!52;UBERON:0007135!4.87e-13!52;UBERON:0002346!6.84e-13!71;UBERON:0003075!6.84e-13!71;UBERON:0007284!6.84e-13!71;UBERON:0007811!7.90e-13!86;UBERON:0000955!6.82e-12!50;UBERON:0006238!6.82e-12!50;UBERON:0002616!2.81e-11!49;UBERON:0000153!4.69e-11!94;UBERON:0002020!1.57e-10!34;UBERON:0003056!1.15e-09!49;UBERON:0003076!5.94e-08!12;UBERON:0003057!5.94e-08!12;UBERON:0002791!2.37e-07!29;UBERON:0003528!2.37e-07!29;UBERON:0001893!2.37e-07!29;UBERON:0003080!3.21e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-24,73;UBERON:0001016,1.25e-23,75;UBERON:0004121,2.14e-23,95;UBERON:0000924,2.14e-23,95;UBERON:0006601,2.14e-23,95;UBERON:0000073,5.03e-19,54;UBERON:0002346,6.65e-18,64;UBERON:0003075,6.65e-18,64;UBERON:0007284,6.65e-18,64;UBERON:0003076,7.86e-16,12;UBERON:0003057,7.86e-16,12;UBERON:0001049,8.97e-16,52;UBERON:0005068,8.97e-16,52;UBERON:0006241,8.97e-16,52;UBERON:0007135,8.97e-16,52;UBERON:0010371,5.51e-15,73;UBERON:0002420,6.14e-13,8;UBERON:0007245,6.14e-13,8;UBERON:0010009,6.14e-13,8;UBERON:0010011,6.14e-13,8;UBERON:0000454,6.14e-13,8;UBERON:0002240,8.32e-11,6;UBERON:0005174,8.32e-11,6;UBERON:0001137,8.32e-11,6;UBERON:0000955,1.02e-10,47;UBERON:0006238,1.02e-10,47;UBERON:0010314,1.03e-10,92;UBERON:0002950,1.04e-09,4;UBERON:0001891,1.04e-09,4;UBERON:0009616,1.04e-09,4;UBERON:0010286,1.04e-09,4;UBERON:0002616,1.39e-09,46;UBERON:0002020,4.12e-09,34;UBERON:0001948,5.46e-09,5;UBERON:0002315,5.46e-09,5;UBERON:0004684,1.02e-08,3;UBERON:0002275,1.02e-08,3;UBERON:0003056,1.52e-08,49;UBERON:0002038,1.39e-07,3;UBERON:0009663,1.39e-07,3;UBERON:0009661,1.39e-07,3;UBERON:0000125,1.39e-07,3;UBERON:0002308,1.39e-07,3;UBERON:0000369,3.63e-07,5;UBERON:0002435,3.63e-07,5;UBERON:0000204,3.63e-07,5;UBERON:0010082,3.63e-07,5;UBERON:0011216,6.33e-07,194;UBERON:0004733,8.29e-07,6;UBERON:0004732,8.29e-07,6;UBERON:0002028,8.29e-07,6;UBERON:0007277,8.29e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,5.75010257459886,0,0,0,0,0,0,2.42779753031517,2.64495489636016,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,2.30530983192933,0.725827286159344,0.540023753326763,0.420649922702764,3.71346279724945,3.09215957332259,0.61245399607477,0.575072826109418,0.919218786610021,3.30347642998166,2.55374676170375,3.07213066512487,1.05509030184155,1.55528994124096,1.56274011167028,1.67509799400829,1.12552522006336,2.59757021220577,2.94628585473668,2.70506193518296,0.745597783301202,0,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,2.09706895166752,0.915001205637253,1.25654352112864,1.21677024134594,0.767146371990992,3.32460871295296,2.10913641988085,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,1.56483948048054,1.15302348256365,1.68663104207512,1.81092359517311,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.710234206755631,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,1.68231958851302,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0.58489226135736,0,0,0,0,0,0,0,0.581857461502877,0.210407459670956,0.822074982615345,0.442830443938806,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,2.0871576698413,3.6335622843583,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0.809621403349789,0,0.395287777946524,1.92792789853084,0,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0.161464426695906,0,0,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0.39736270956253,0.841368146639782,0.295379054349154,1.00966449948148,1.295515713135,1.51239277705261,0.779663045918019,0.481059208201647,0.584384510907845,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0.906284817968409,0,0,0.798049746802062,0.512200817262403,0,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.384150914429216,0.34461281373368,0.476293691283074,0.695305955669133,0,0,0.588795680537589,0.342869252385415,0.177475806159338,0.953744759789284,0.436039249896986,0.0941093804153306,0.25384382367503,0.73171189149109,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Wscd1 | |||
}} |
Latest revision as of 15:23, 25 September 2015
Short description: | p3@Wscd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Wscd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000150531_5end |
EntrezGene: | Wscd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-24 | 23 |
neuron | 5.75e-16 | 33 |
neuronal stem cell | 5.75e-16 | 33 |
neuroblast | 5.75e-16 | 33 |
electrically signaling cell | 5.75e-16 | 33 |
neural cell | 5.08e-15 | 43 |
ectodermal cell | 1.40e-14 | 44 |
neurectodermal cell | 1.40e-14 | 44 |
electrically responsive cell | 6.31e-13 | 39 |
electrically active cell | 6.31e-13 | 39 |
raphe nuclei neuron | 1.02e-08 | 3 |
granule cell | 2.14e-08 | 3 |
embryonic cell | 1.33e-07 | 70 |
neuron of the substantia nigra | 1.39e-07 | 3 |
striatum neuron | 3.74e-07 | 3 |