FFCP PHASE1:Hg19::chr9:36401242..36401266,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:36401242..36401266,-
|short_description=p13@RNF38
|description=CAGE_peak_13_at_RNF38_5end
|association_with_transcript=-47bp_to_ENST00000377885,ENST0000048...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152006 | |EntrezGene=152006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |HGNC=18052 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0F5 | |UniProt=Q9H0F5 | ||
|association_with_transcript=-47bp_to_ENST00000377885,ENST00000484621,NM_194330,uc003zzm.2_5end | |||
|cluster_id=chr9:36401242..36401266,- | |||
|description=CAGE_peak_13_at_RNF38_5end | |||
|id=chr9:36401242..36401266,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.05e-10;1!UBERON:0003124;6.05e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;6.05e-10;1!DOID:10165;6.05e-10;1!DOID:1798;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-09,1;DOID:10165,1.07e-09,1;DOID:1798,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-19!115;UBERON:0001049!1.85e-09!57;UBERON:0005068!1.85e-09!57;UBERON:0006241!1.85e-09!57;UBERON:0007135!1.85e-09!57;UBERON:0000073!2.49e-09!94;UBERON:0001016!2.49e-09!94;UBERON:0001017!2.83e-09!82;UBERON:0005743!4.02e-09!86;UBERON:0000924!1.17e-07!173;UBERON:0006601!1.17e-07!173;UBERON:0000955!1.28e-07!69;UBERON:0006238!1.28e-07!69;UBERON:0002616!2.66e-07!59;UBERON:0004121!2.74e-07!169;UBERON:0002346!3.10e-07!90;UBERON:0000153!3.81e-07!129;UBERON:0007811!3.81e-07!129;UBERON:0003075!7.50e-07!86;UBERON:0007284!7.50e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.77e-13;6!UBERON:0003293;1.77e-13;6!UBERON:0003294;1.77e-13;6!UBERON:0010047;1.77e-13;6!UBERON:0003408;1.77e-13;6!UBERON:0000167;1.77e-13;6!UBERON:0002336;6.05e-10;1!UBERON:0001831;6.05e-10;1!UBERON:0000996;6.05e-10;1!UBERON:0011215;6.05e-10;1!UBERON:0001018;6.05e-10;1!UBERON:0002473;6.05e-10;1!UBERON:0005340;6.05e-10;1!UBERON:0003544;6.05e-10;1!UBERON:0005970;6.05e-10;1!UBERON:0002316;6.05e-10;1!UBERON:0001020;6.05e-10;1!UBERON:0001567;6.05e-10;1!UBERON:0002437;6.05e-10;1!UBERON:0002365;8.47e-07;31!UBERON:0002330;8.47e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.46e-13,6;UBERON:0003293,1.46e-13,6;UBERON:0003294,1.46e-13,6;UBERON:0010047,1.46e-13,6;UBERON:0000167,1.46e-13,6;UBERON:0000996,3.10e-10,1;UBERON:0001831,4.44e-10,1;UBERON:0001567,4.44e-10,1;UBERON:0008801,4.44e-10,1;UBERON:0002336,1.17e-09,1;UBERON:0011215,1.17e-09,1;UBERON:0001018,1.17e-09,1;UBERON:0002473,1.17e-09,1;UBERON:0005340,1.17e-09,1;UBERON:0003544,1.17e-09,1;UBERON:0005970,1.17e-09,1;UBERON:0002316,1.17e-09,1;UBERON:0001020,1.17e-09,1;UBERON:0002437,1.17e-09,1;UBERON:0003408,2.40e-08,10;UBERON:0002365,8.51e-07,31;UBERON:0002330,8.51e-07,31 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,1.75996244461323,0,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0.590129310341499,0,0.411202997999018,0.167186495390678,0.651844533267181,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90090408889675,0,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0.221729397462564,0.175669571386252,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0.463721619900307,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,2.34434894420094,0,0,0,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0,0.574265537996172,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0,0,0,0.941438007767792,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,0.648473311192717,0,3.17250070517708,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.593929361665277,0,0,0.703347082052564,0.445234820091624,0.16480387422676,0.211125408127993,0.19924798825107,0,0.251932747854276,0.306806047506464,0,0,0,0,0.511572370226872,0.493217028184668,0,0,0,0.463840490809256,0,0.260427761085233,0.349839999984783,0.724999575434793,0,0.762760950878299,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,0,0.482385754501632,0,0.774054819518572,0,0.438770794307945,0.10893846351899,0,1.07730361905316,0.113942055847001,0.922255617552241,0.538545866458633,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0.141353071433941,0.432777279484182,0,0.442287822516696,0,0,0,0,1.01101699471016,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0.150323419414493,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0.261177619741208,0.17472666824203,0.171986032471617,0,0.219267951258557,0.0821154570532092,0.290967049465258,0,0.451961481561065,0.137041924646751,0,0.316553979779393,0,0.0801588202515337,0.426905989478705,0.19980960958213,0.288180834308212,0,0,0.432164393964449,0,0,0.543616824294456,0.209205692624666,0,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0.458320848023367,0,0,0,0.89268582976749,0.53746777989381,0,1.16495949527454,0.236349546921671,0.247247575143499,0.202210631562555,0.196854963029498,0,0,0.817220436669454,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.786818822024972,0.528001682597033,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0.453248366080503,0,0,0.646414781807753,0.39669780522807,0,0,0.427149650270779,0,0.414239055347196,0,0.197611631897944,0.121792598380896,0.638341257770182,1.08803560673895,0.75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| ||
|short_description=p13@RNF38 | |||
}} | }} |
Latest revision as of 09:53, 17 September 2015
Short description: | p13@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RNF38_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000377885, ENST00000484621, NM_194330, uc003zzm.2_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | Q9H0F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.46e-13 | 6 |
gland of oral region | 1.46e-13 | 6 |
gland of foregut | 1.46e-13 | 6 |
oral gland | 1.46e-13 | 6 |
oral cavity | 1.46e-13 | 6 |
vagina | 3.10e-10 | 1 |
parotid gland | 4.44e-10 | 1 |
cheek | 4.44e-10 | 1 |
parotid gland primordium | 4.44e-10 | 1 |
corpus callosum | 1.17e-09 | 1 |
central nervous system cell part cluster | 1.17e-09 | 1 |
axon tract | 1.17e-09 | 1 |
intercerebral commissure | 1.17e-09 | 1 |
dorsal telencephalic commissure | 1.17e-09 | 1 |
brain white matter | 1.17e-09 | 1 |
brain commissure | 1.17e-09 | 1 |
white matter | 1.17e-09 | 1 |
nervous system commissure | 1.17e-09 | 1 |
cerebral hemisphere white matter | 1.17e-09 | 1 |
gland of gut | 2.40e-08 | 10 |
exocrine gland | 8.51e-07 | 31 |
exocrine system | 8.51e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.07e-09 | 1 |
endocrine pancreas cancer | 1.07e-09 | 1 |
pancreatic endocrine carcinoma | 1.07e-09 | 1 |