FFCP PHASE1:Hg19::chr3:12329397..12329433,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000397015_5end | |||
|cluster_id=chr3:12329397..12329433,+ | |||
|coexpression_cluster_id=C2220 | |||
|description=CAGE_peak_2_at_PPARG_5end | |||
|id=chr3:12329397..12329433,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.38e-14!45;CL:0002057!2.93e-13!42;CL:0002194!6.88e-13!63;CL:0000576!6.88e-13!63;CL:0000040!6.88e-13!63;CL:0000559!6.88e-13!63;CL:0002009!7.76e-12!65;CL:0000839!1.63e-09!70;CL:0000557!3.29e-09!71;CL:0000766!6.71e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.68e-17;33!CL:0002057;6.68e-17;33!CL:0000473;2.38e-15;39!CL:0000234;2.38e-15;39!CL:0000576;1.91e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.77e-15,48;CL:0000234,2.77e-15,48;CL:0000860,1.59e-13,42;CL:0002057,1.59e-13,42;CL:0002194,9.00e-13,59;CL:0000576,9.00e-13,59;CL:0000040,9.00e-13,59;CL:0000559,9.00e-13,59;CL:0002009,1.13e-11,61;CL:0000839,9.82e-10,66;CL:0000557,2.64e-09,67;CL:0000766,7.24e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.30e-19!448;UBERON:0004120!8.30e-19!448;UBERON:0006603!8.30e-19!448;UBERON:0000062!1.07e-18!511;UBERON:0000468!1.51e-14!659;UBERON:0000467!3.83e-14!625;UBERON:0000480!7.27e-14!626;UBERON:0002050!1.00e-11!605;UBERON:0005423!1.00e-11!605;UBERON:0000923!1.71e-11!604;UBERON:0005291!1.71e-11!604;UBERON:0006598!1.71e-11!604;UBERON:0002532!1.71e-11!604;UBERON:0000922!3.23e-11!612;UBERON:0002405!5.76e-11!115;UBERON:0002371!2.65e-09!80;UBERON:0001474!2.15e-08!86;UBERON:0004119!2.17e-08!169;UBERON:0000925!2.17e-08!169;UBERON:0006595!2.17e-08!169;UBERON:0000481!4.13e-08!347;UBERON:0000077!5.30e-08!130;UBERON:0004765!5.72e-08!101;UBERON:0001434!5.72e-08!101;UBERON:0001007!6.85e-08!155;UBERON:0001555!6.85e-08!155;UBERON:0007026!6.85e-08!155;UBERON:0003104!1.05e-07!238;UBERON:0009142!1.05e-07!238;UBERON:0004921!1.96e-07!129;UBERON:0004185!1.96e-07!129;UBERON:0002204!8.18e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.43e-10,93;UBERON:0002371,9.62e-10,76;UBERON:0004765,1.17e-09,90;UBERON:0000926,3.09e-09,315;UBERON:0004120,3.09e-09,315;UBERON:0006603,3.09e-09,315;UBERON:0001434,3.15e-09,100;UBERON:0001474,6.85e-09,82;UBERON:0002204,1.49e-07,167;UBERON:0004119,3.70e-07,160;UBERON:0000925,3.70e-07,160;UBERON:0006595,3.70e-07,160;UBERON:0000922,9.57e-07,592 | |||
|phase1_expression=3.81524596468169,14.1306345768049,3.80576891059122,3.00219895059391,12.9618717383913,0,27.8629865985142,7.58063848112197,46.7522274477711,2.21160542851358,1.39560233594486,5.46103430325431,3.9565046734268,14.4806632963255,10.6047160232933,0.672325146451775,0,0,0,2.33930010345897,5.71201935483908,1.56727360739044,0,0.821246550437305,0.376627918784408,0.0764134057479513,0,0,0.786728553697808,0.767658796194425,3.2511385896376,0,0,1.84877005083394,0,0,0,9.97191735357379,3.60980005446255,5.64228263861215,6.04571780447796,2.26725566213286,5.92423805558629,8.86929256555345,46.8566170174124,23.5306539352182,41.6047976061176,114.715840758089,143.703756095328,88.8969492275445,63.7840159257461,82.0593337713391,52.401343471966,49.7023206359546,59.5876541015104,27.6716239127629,52.3979808111064,45.6188673423522,21.4258724659632,49.1021411426423,52.4256443155214,11.2149442063483,30.7174032737313,25.9997097824943,35.1153178740587,53.9015963456583,63.5278693975486,118.589370001183,84.4802327840726,95.3459028255462,33.2969726448353,37.5643188707316,49.0516700533371,0,0.425208599930087,0.419317291016752,0.786300418025466,0.300353785683013,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,1.14950487990897,0,0,0,1.17447437874188,0,0,3.36305137788922,0.263384084775077,0,0,0.205601498999509,0,0,0,0,1.22551502573691,0,0,0,1.5370958367081,1.04047478047903,0,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,70.7039912310489,6.03630773733273,1.15076305659177,0,1.50401373190767,1.30361867064741,0,0.486634870302636,4.63220604103932,9.75609348835281,6.23626978421195,2.48860243445654,0,0.370784442784429,3.8945687238562,2.78607579678828,5.58423434179234,0.238490624305342,0,0,0.596287222100115,3.4409383804245,0.347140501607594,2.26123176769604,0,0,0.208994966536811,2.32575083252396,2.49036383880697,3.3472061276467,13.696196781711,2.28081631715554,31.4840054237139,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,1.72131935057184,2.0078563452417,2.83734705758686,1.12135520028461,2.1349799145941,0.74000264525148,16.8053959115874,8.08264032418128,3.92308567472301,6.20565453344219,14.404398112,18.2770716830361,29.6552072988804,10.2684927878001,21.6700586800112,11.508580867089,14.0829461600274,10.8147121160731,17.3531045566659,7.12439040408254,25.5214679504141,1.18800285728205,0.989067717114227,8.19145225744224,7.18618141816238,8.58514181165738,5.63033339423839,7.75779523355712,1.31693286264251,0.919463387397059,2.85452311922534,3.28953331164061,1.07633781413317,1.2813443329114,1.48352330811693,0,0,1.03056216018252,0.558350568994769,0.337552664482532,0.194874010322397,0.504867548488229,0.644349290496095,4.52608959092673,0.710019185033229,0.10075209822764,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,7.89425477654364,7.21879481669586,3.19428360107579,2.86593973132773,4.82022059766964,2.42646740011267,5.01122721412534,3.79632990577755,2.56179485504312,2.35465758150415,2.30848294167834,3.69077727312324,0,0.4115740113314,1.47008711385542,1.26755034821831,18.6737171168749,2.95394953340702,0,7.87126006675927,4.80389868835872,0,0,0,0.462942225792648,7.81939932744779,18.7188261350324,8.6598805215164,2.31860809950154,2.34817388471643,9.09508620894765,4.62985512576611,9.51270761172991,1.58040879591855,2.57545848628462,4.67812311566055,4.68008530278475,4.7561971932393,0,0.16798212819886,0,1.52249488594842,0,0,1.97065295158377,0.088048434013226,0,0,0,0.190493682876507,1.52795370223311,1.17217447210047,3.4214489204541,0.719792448923265,0,0.857479297891735,5.49442313292267,1.30788020649984,5.20701829328745,0.129271715757778,17.8828222925941,6.762422020448,3.19125739901845,2.08014873822732,8.23063597638855,11.3479305618623,8.25908754949908,3.28849385413739,5.42621605391443,1.64648067356154,4.88604276440603,2.48774364119782,0,2.1100756394171,0,1.89948683245908,13.378615870531,5.52482800575339,10.5416969741516,0.958499421966331,0,1.42636905040718,2.02693829334611,6.57524232161227,1.25342674267927,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,13.9868300559819,21.0071618845064,17.6322265404828,3.11956292296211,0.535286966391485,0.788512075169673,1.17141414992713,1.80567659836631,2.27407504055985,15.5209606938757,0,1.65932251687533,7.90640891659554,2.93701736194111,5.14715135716284,0.413536052245775,2.15714200818617,0.640365346820666,0.909382714338778,8.32177197552485,3.32629322662648,0,0.767309866440312,1.12264037773229,2.05022638809122,0,0.965123526861645,0,4.1636617326717,4.6166048581413,5.99528238900807,5.19254429183621,8.25093687065711,3.14234568938218,3.60911646545913,3.49907757956406,7.00368133804101,9.650831904356,12.063446176267,4.51199612907412,2.15642943892361,5.49044838423799,2.92278449306521,1.47772280450026,3.4120015221269,0.850468526382578,3.45465465763423,0,4.6060894382455,3.01013864312912,4.33289664176565,10.8039881160734,3.3581213208326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| |||
|short_description=p2@PPARG | |||
}} |
Latest revision as of 01:05, 20 September 2015
Short description: | p2@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPARG_5end |
Coexpression cluster: | C2220_CD14_mature_chorionic_adipose_breast_Cardiac_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000397015_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.77e-15 | 48 |
phagocyte | 2.77e-15 | 48 |
classical monocyte | 1.59e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-13 | 42 |
monopoietic cell | 9.00e-13 | 59 |
monocyte | 9.00e-13 | 59 |
monoblast | 9.00e-13 | 59 |
promonocyte | 9.00e-13 | 59 |
macrophage dendritic cell progenitor | 1.13e-11 | 61 |
myeloid lineage restricted progenitor cell | 9.82e-10 | 66 |
granulocyte monocyte progenitor cell | 2.64e-09 | 67 |
myeloid leukocyte | 7.24e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.43e-10 | 93 |
bone marrow | 9.62e-10 | 76 |
skeletal element | 1.17e-09 | 90 |
mesoderm | 3.09e-09 | 315 |
mesoderm-derived structure | 3.09e-09 | 315 |
presumptive mesoderm | 3.09e-09 | 315 |
skeletal system | 3.15e-09 | 100 |
bone element | 6.85e-09 | 82 |
musculoskeletal system | 1.49e-07 | 167 |
endoderm-derived structure | 3.70e-07 | 160 |
endoderm | 3.70e-07 | 160 |
presumptive endoderm | 3.70e-07 | 160 |
embryo | 9.57e-07 | 592 |