FFCP PHASE1:Mm9::chr11:97524415..97524455,+: Difference between revisions
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{{FFCP|EntrezGene=246198|HGNC=|MCL_coexpression_id=1|UniProt=B1AR09,Q3UPK1|association_with_transcript=-270bp_to_NM_139311,uc007lei.1_5end|description=CAGE_peak_2_at_Mllt6_5end|id=chr11:97524415..97524455,+|ontology_enrichment_celltype=CL:0000117!2.67e-09!23;CL:0000337!2.67e-09!23;CL:0000540!5.47e-09!33;CL:0000047!5.47e-09!33;CL:0000031!5.47e-09!33;CL:0000404!5.47e-09!33;CL:0000221!4.94e-07!44;CL:0000133!4.94e-07!44;CL:0002319!5.38e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-09,23;CL:0000337,2.63e-09,23;CL:0000540,5.39e-09,33;CL:0000047,5.39e-09,33;CL:0000031,5.39e-09,33;CL:0000404,5.39e-09,33;CL:0000221,4.88e-07,44;CL:0000133,4.88e-07,44;CL:0002319,5.32e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.76e-19!73;UBERON:0005743!3.76e-19!73;UBERON:0000073!3.88e-18!75;UBERON:0001016!3.88e-18!75;UBERON:0002616!1.33e-17!49;UBERON:0000955!2.74e-17!50;UBERON:0006238!2.74e-17!50;UBERON:0001049!3.07e-16!52;UBERON:0005068!3.07e-16!52;UBERON:0006241!3.07e-16!52;UBERON:0007135!3.07e-16!52;UBERON:0007811!7.07e-16!86;UBERON:0003080!2.03e-15!40;UBERON:0002780!2.67e-15!39;UBERON:0001890!2.67e-15!39;UBERON:0006240!2.67e-15!39;UBERON:0002791!7.24e-15!29;UBERON:0003528!7.24e-15!29;UBERON:0001893!7.24e-15!29;UBERON:0000033!9.81e-15!63;UBERON:0002020!2.23e-14!34;UBERON:0003056!3.13e-14!49;UBERON:0000153!4.45e-14!94;UBERON:0002346!1.62e-12!71;UBERON:0003075!1.62e-12!71;UBERON:0007284!1.62e-12!71;UBERON:0004121!5.05e-12!102;UBERON:0000924!5.05e-12!102;UBERON:0006601!5.05e-12!102;UBERON:0000956!1.16e-10!21;UBERON:0001869!1.16e-10!21;UBERON:0000203!1.16e-10!21;UBERON:0002619!1.65e-08!17;UBERON:0002021!8.88e-08!10;UBERON:0000411!8.88e-08!10;UBERON:0001950!8.88e-08!10;UBERON:0000025!9.31e-08!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.62e-19,73;UBERON:0001016,3.75e-18,75;UBERON:0000073,1.53e-17,54;UBERON:0001049,2.98e-16,52;UBERON:0005068,2.98e-16,52;UBERON:0006241,2.98e-16,52;UBERON:0007135,2.98e-16,52;UBERON:0002616,7.17e-16,46;UBERON:0000955,1.44e-15,47;UBERON:0006238,1.44e-15,47;UBERON:0003080,1.97e-15,40;UBERON:0002780,2.60e-15,39;UBERON:0001890,2.60e-15,39;UBERON:0006240,2.60e-15,39;UBERON:0002346,6.70e-15,64;UBERON:0003075,6.70e-15,64;UBERON:0007284,6.70e-15,64;UBERON:0003528,7.05e-15,29;UBERON:0002791,7.05e-15,29;UBERON:0001893,7.05e-15,29;UBERON:0002020,2.18e-14,34;UBERON:0003056,3.05e-14,49;UBERON:0004121,9.90e-14,95;UBERON:0000924,9.90e-14,95;UBERON:0006601,9.90e-14,95;UBERON:0010314,1.49e-12,92;UBERON:0010371,9.11e-12,73;UBERON:0000956,1.14e-10,21;UBERON:0001869,1.14e-10,21;UBERON:0000203,1.14e-10,21;UBERON:0002619,1.63e-08,17;UBERON:0000025,8.64e-08,114;UBERON:0002021,8.77e-08,10;UBERON:0000411,8.77e-08,10;UBERON:0001950,8.77e-08,10|phase1_expression=2.08193501236232,1.39590163055744,0.909998478779072,6.35174843744343,6.51164448930251,1.17515490338323,1.40167584357315,6.19791952519566,1.83025338797167,3.04283884218592,2.39705155515707,3.43020283679947,3.93761678841773,4.45844052336887,0.666219523631325,1.01237633694913,1.39912375625629,2.68142840554502,3.01651753932625,0.84877930359606,4.5072943780067,2.08510997521859,1.82839852397255,0.319984845586813,1.37645568640302,2.29692785646008,1.29228598847722,1.50829862880122,2.09025761402011,3.2763916868791,1.99557459589774,2.54012269383853,6.1506478758457,0,2.3108129580102,2.1610503896604,1.63335485009895,0,0.7813353445238,0.523523743973798,0,0,1.45653105909346,1.51076181570693,0.304130793658544,1.28482726513177,3.12956537739216,1.30815093828268,2.41654801007919,1.55543919259427,1.67983705950435,5.75010257459886,3.18786951509699,4.35217285206807,6.38578218370682,1.28629718017973,1.14613375975503,2.57836046138721,6.67644320836673,3.1739458756322,6.33831403506179,2.37191172448392,3.55717918444456,3.5995988691256,4.94433181283487,5.6838409195688,2.69640099466564,5.37905627450176,6.0139975138917,6.21027316325777,6.30974884054146,3.14216082844184,3.09215957332259,5.75706756310284,6.51749202924007,5.51531271966013,5.50579404996943,10.7257363991558,9.21639199537461,4.87979264601717,5.03182039813253,6.25096044668112,7.2587579740359,6.75315132038016,9.16789486660861,2.65165726926301,3.27454865837937,4.47358669980721,1.74170244666323,1.88928900266964,2.6087803983151,1.72084775396277,1.3599426674155,1.07940638327563,1.29955283489534,3.58421509677868,1.12355536105401,1.02258193546835,1.03914401841148,1.06001872353102,3.23939865486365,2.56652954828636,12.7402619853323,14.2213340630666,0,0.506719730950197,1.51657333504435,4.68153906848146,0,1.92974780784272,2.25530924795977,0.913396434936424,2.53677046981664,2.71300752994721,1.99900802130698,2.26199864393416,1.48316980640624,0.722996784599558,0.884610551949874,2.91180329905337,2.42925670306433,3.39412677194655,0,4.68449275218475,7.33063473847093,2.04365644166873,2.63593273913025,0.599902730993408,2.03312363316904,3.74476598512057,12.8100168789215,5.6544458450789,12.8629996942285,17.3886510984625,4.36354893575076,8.76102820565891,5.19380755636613,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246198 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=B1AR09,Q3UPK1 | |||
|association_with_transcript=-270bp_to_NM_139311,uc007lei.1_5end | |||
|cluster_id=chr11:97524415..97524455,+ | |||
|description=CAGE_peak_2_at_Mllt6_5end | |||
|id=chr11:97524415..97524455,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.67e-09!23;CL:0000337!2.67e-09!23;CL:0000540!5.47e-09!33;CL:0000047!5.47e-09!33;CL:0000031!5.47e-09!33;CL:0000404!5.47e-09!33;CL:0000221!4.94e-07!44;CL:0000133!4.94e-07!44;CL:0002319!5.38e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-09,23;CL:0000337,2.63e-09,23;CL:0000540,5.39e-09,33;CL:0000047,5.39e-09,33;CL:0000031,5.39e-09,33;CL:0000404,5.39e-09,33;CL:0000221,4.88e-07,44;CL:0000133,4.88e-07,44;CL:0002319,5.32e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.76e-19!73;UBERON:0005743!3.76e-19!73;UBERON:0000073!3.88e-18!75;UBERON:0001016!3.88e-18!75;UBERON:0002616!1.33e-17!49;UBERON:0000955!2.74e-17!50;UBERON:0006238!2.74e-17!50;UBERON:0001049!3.07e-16!52;UBERON:0005068!3.07e-16!52;UBERON:0006241!3.07e-16!52;UBERON:0007135!3.07e-16!52;UBERON:0007811!7.07e-16!86;UBERON:0003080!2.03e-15!40;UBERON:0002780!2.67e-15!39;UBERON:0001890!2.67e-15!39;UBERON:0006240!2.67e-15!39;UBERON:0002791!7.24e-15!29;UBERON:0003528!7.24e-15!29;UBERON:0001893!7.24e-15!29;UBERON:0000033!9.81e-15!63;UBERON:0002020!2.23e-14!34;UBERON:0003056!3.13e-14!49;UBERON:0000153!4.45e-14!94;UBERON:0002346!1.62e-12!71;UBERON:0003075!1.62e-12!71;UBERON:0007284!1.62e-12!71;UBERON:0004121!5.05e-12!102;UBERON:0000924!5.05e-12!102;UBERON:0006601!5.05e-12!102;UBERON:0000956!1.16e-10!21;UBERON:0001869!1.16e-10!21;UBERON:0000203!1.16e-10!21;UBERON:0002619!1.65e-08!17;UBERON:0002021!8.88e-08!10;UBERON:0000411!8.88e-08!10;UBERON:0001950!8.88e-08!10;UBERON:0000025!9.31e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.62e-19,73;UBERON:0001016,3.75e-18,75;UBERON:0000073,1.53e-17,54;UBERON:0001049,2.98e-16,52;UBERON:0005068,2.98e-16,52;UBERON:0006241,2.98e-16,52;UBERON:0007135,2.98e-16,52;UBERON:0002616,7.17e-16,46;UBERON:0000955,1.44e-15,47;UBERON:0006238,1.44e-15,47;UBERON:0003080,1.97e-15,40;UBERON:0002780,2.60e-15,39;UBERON:0001890,2.60e-15,39;UBERON:0006240,2.60e-15,39;UBERON:0002346,6.70e-15,64;UBERON:0003075,6.70e-15,64;UBERON:0007284,6.70e-15,64;UBERON:0003528,7.05e-15,29;UBERON:0002791,7.05e-15,29;UBERON:0001893,7.05e-15,29;UBERON:0002020,2.18e-14,34;UBERON:0003056,3.05e-14,49;UBERON:0004121,9.90e-14,95;UBERON:0000924,9.90e-14,95;UBERON:0006601,9.90e-14,95;UBERON:0010314,1.49e-12,92;UBERON:0010371,9.11e-12,73;UBERON:0000956,1.14e-10,21;UBERON:0001869,1.14e-10,21;UBERON:0000203,1.14e-10,21;UBERON:0002619,1.63e-08,17;UBERON:0000025,8.64e-08,114;UBERON:0002021,8.77e-08,10;UBERON:0000411,8.77e-08,10;UBERON:0001950,8.77e-08,10 | |||
|phase1_expression=2.08193501236232,1.39590163055744,0.909998478779072,6.35174843744343,6.51164448930251,1.17515490338323,1.40167584357315,6.19791952519566,1.83025338797167,3.04283884218592,2.39705155515707,3.43020283679947,3.93761678841773,4.45844052336887,0.666219523631325,1.01237633694913,1.39912375625629,2.68142840554502,3.01651753932625,0.84877930359606,4.5072943780067,2.08510997521859,1.82839852397255,0.319984845586813,1.37645568640302,2.29692785646008,1.29228598847722,1.50829862880122,2.09025761402011,3.2763916868791,1.99557459589774,2.54012269383853,6.1506478758457,0,2.3108129580102,2.1610503896604,1.63335485009895,0,0.7813353445238,0.523523743973798,0,0,1.45653105909346,1.51076181570693,0.304130793658544,1.28482726513177,3.12956537739216,1.30815093828268,2.41654801007919,1.55543919259427,1.67983705950435,5.75010257459886,3.18786951509699,4.35217285206807,6.38578218370682,1.28629718017973,1.14613375975503,2.57836046138721,6.67644320836673,3.1739458756322,6.33831403506179,2.37191172448392,3.55717918444456,3.5995988691256,4.94433181283487,5.6838409195688,2.69640099466564,5.37905627450176,6.0139975138917,6.21027316325777,6.30974884054146,3.14216082844184,3.09215957332259,5.75706756310284,6.51749202924007,5.51531271966013,5.50579404996943,10.7257363991558,9.21639199537461,4.87979264601717,5.03182039813253,6.25096044668112,7.2587579740359,6.75315132038016,9.16789486660861,2.65165726926301,3.27454865837937,4.47358669980721,1.74170244666323,1.88928900266964,2.6087803983151,1.72084775396277,1.3599426674155,1.07940638327563,1.29955283489534,3.58421509677868,1.12355536105401,1.02258193546835,1.03914401841148,1.06001872353102,3.23939865486365,2.56652954828636,12.7402619853323,14.2213340630666,0,0.506719730950197,1.51657333504435,4.68153906848146,0,1.92974780784272,2.25530924795977,0.913396434936424,2.53677046981664,2.71300752994721,1.99900802130698,2.26199864393416,1.48316980640624,0.722996784599558,0.884610551949874,2.91180329905337,2.42925670306433,3.39412677194655,0,4.68449275218475,7.33063473847093,2.04365644166873,2.63593273913025,0.599902730993408,2.03312363316904,3.74476598512057,12.8100168789215,5.6544458450789,12.8629996942285,17.3886510984625,4.36354893575076,8.76102820565891,5.19380755636613,2.73695335342205,1.0108910337347,4.41927897361595,2.21204753036596,1.37941262660084,1.80062129805349,2.10986744970001,3.94611695077702,3.20284300712124,5.80950692270319,3.88055056108524,2.58681591519411,3.59301552318857,1.93546236580344,3.28793598641362,3.33656699070717,1.74126083261083,1.4404749548556,5.9710280045548,0,1.80143534980301,0.568326998791185,2.69263504296152,3.04883877975425,2.52086886045421,2.60419209143731,4.72234156193769,3.85667782218446,4.65067889500816,4.56064782379353,4.55384835231961,3.29119699826961,4.59668899421467,4.29664690593035,4.67839959761063,1.97595103761946,3.35516046900929,9.2527577368216,4.73361216944708,4.62586296177317,1.05780226665418,2.34617075588757,2.09013004674395,1.28867461322093,0.605050573870028,2.2237804384487,0.951128130562796,1.42358718463353,1.31759163779209,3.51869292320377,2.98434708061726,1.36474860983384,1.79763881730844,2.37751854862164,2.98711909881551,2.46568271239006,3.77020091612105,0,2.03651327845314,3.68509725618489,5.19005067188357,3.85742876457969,4.13308414342886,3.1399745568275,2.83813477020141,1.1858105083486,0.500535317148282,1.17935397067922,1.34917267430912,1.21716072833102,0.482354319504834,1.01850340712568,1.43848068725405,4.05338066937588,0.274561413188081,5.75072826109418,3.34926852901653,3.43241440426017,4.2938409251009,1.97337154874103,4.3419916922703,1.66277871149944,1.32643988239339,2.60743962307241,2.8856664581782,3.52035372432753,2.01007508930179,1.6663054862021,2.73187107000918,4.72905432318573,2.6575762757853,4.78364305972461,2.78567635016755,3.28101465545202,3.7608755231193,0,0.54390568381871,1.96705709207614,1.37968373152366,3.05046120976805,7.501547941901,1.96721934452011,4.03953483526997,2.52406575533005,1.56175497718655,4.09304455692318,3.82350076724083,5.34716817797746,3.67999490025482,3.23848561339915,4.09158201075837,3.55759000151871,2.57057053137446,1.70328102249922,5.52003371368491,6.35259141478947,3.29940245945071,1.32745138339963,1.21390318077491,3.02323556964751,2.07465587731488,0.885905678642318,2.15204603560749,4.39328098385976,2.18120237686503,3.56497378384721,1.26414703174326,1.05418608574999,1.03135543248187,3.40439605753788,2.88097750450096,3.36332577835162,4.07240366560025,2.83744373827638,3.56737635204141,2.96188237083818,3.65357938937519,1.40803024838226,2.33015277950202,1.54369878638473,3.46261131177108,1.61464426695906,1.68876189798836,1.19372344003136,1.80554989719567,2.62332752966866,5.19190845629427,1.19609616558497,3.92135049130123,1.48155621895769,1.31857919903284,1.91371918809435,1.37266903923914,4.58941760983409,5.318155188299,2.62579950228405,0,2.84702394223022,1.42323626988794,2.16010681643603,1.67270636811575,1.9652630737156,0.944050424693745,1.81837602595739,1.83229159388821,1.94422459937689,1.8640179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| |||
|short_description=p2@Mllt6 | |||
}} |
Latest revision as of 02:27, 26 September 2015
Short description: | p2@Mllt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mllt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -270bp_to_NM_139311, uc007lei.1_5end |
EntrezGene: | Mllt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.63e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.63e-09 | 23 |
neuron | 5.39e-09 | 33 |
neuronal stem cell | 5.39e-09 | 33 |
neuroblast | 5.39e-09 | 33 |
electrically signaling cell | 5.39e-09 | 33 |
ectodermal cell | 4.88e-07 | 44 |
neurectodermal cell | 4.88e-07 | 44 |
neural cell | 5.32e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.62e-19 | 73 |
nervous system | 3.75e-18 | 75 |
regional part of nervous system | 1.53e-17 | 54 |
neural tube | 2.98e-16 | 52 |
neural rod | 2.98e-16 | 52 |
future spinal cord | 2.98e-16 | 52 |
neural keel | 2.98e-16 | 52 |
regional part of brain | 7.17e-16 | 46 |
brain | 1.44e-15 | 47 |
future brain | 1.44e-15 | 47 |
anterior neural tube | 1.97e-15 | 40 |
regional part of forebrain | 2.60e-15 | 39 |
forebrain | 2.60e-15 | 39 |
future forebrain | 2.60e-15 | 39 |
neurectoderm | 6.70e-15 | 64 |
neural plate | 6.70e-15 | 64 |
presumptive neural plate | 6.70e-15 | 64 |
brain grey matter | 7.05e-15 | 29 |
regional part of telencephalon | 7.05e-15 | 29 |
telencephalon | 7.05e-15 | 29 |
gray matter | 2.18e-14 | 34 |
pre-chordal neural plate | 3.05e-14 | 49 |
ectoderm-derived structure | 9.90e-14 | 95 |
ectoderm | 9.90e-14 | 95 |
presumptive ectoderm | 9.90e-14 | 95 |
structure with developmental contribution from neural crest | 1.49e-12 | 92 |
ecto-epithelium | 9.11e-12 | 73 |
cerebral cortex | 1.14e-10 | 21 |
cerebral hemisphere | 1.14e-10 | 21 |
pallium | 1.14e-10 | 21 |
regional part of cerebral cortex | 1.63e-08 | 17 |
tube | 8.64e-08 | 114 |
occipital lobe | 8.77e-08 | 10 |
visual cortex | 8.77e-08 | 10 |
neocortex | 8.77e-08 | 10 |