FFCP PHASE1:Hg19::chr3:147126815..147126825,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:147126815..147126825,- | |||
|coexpression_cluster_id=C711 | |||
|description=CAGE_peak_at_chr3:147126815..147126825,- | |||
|id=chr3:147126815..147126825,- | |||
|ontology_enrichment_celltype=CL:0002620!1.84e-11!23;CL:0002319!7.89e-08!25;CL:0000095!8.37e-08!17;CL:0000123!8.37e-08!17;CL:0000243!9.80e-08!15;CL:0000125!9.80e-08!15;CL:0000030!9.80e-08!15;CL:0000339!9.80e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002575;5.77e-12;2!CL:0002549;4.63e-11;2!CL:0000047;1.01e-10;2!CL:0000708;3.71e-08;3!CL:0002603;7.02e-08;3!CL:0000064;1.99e-07;3!CL:0000067;1.99e-07;3!CL:0005012;1.99e-07;3!CL:0002304;1.99e-07;3!CL:0002620;2.53e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,5.94e-12,2;CL:0002549,5.83e-11,2;CL:0000708,3.65e-08,3;CL:0002603,6.35e-08,3;CL:0000064,1.29e-07,3;CL:0000067,1.29e-07,3;CL:0005012,1.29e-07,3;CL:0002304,1.29e-07,3;CL:0002620,2.91e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.91e-08;3!UBERON:0006241;1.99e-07;3!UBERON:0003057;1.99e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.00e-33!94;UBERON:0001016!6.00e-33!94;UBERON:0001017!9.77e-32!82;UBERON:0005743!6.69e-31!86;UBERON:0000955!6.73e-27!69;UBERON:0006238!6.73e-27!69;UBERON:0002616!9.75e-26!59;UBERON:0001049!3.33e-24!57;UBERON:0005068!3.33e-24!57;UBERON:0006241!3.33e-24!57;UBERON:0007135!3.33e-24!57;UBERON:0002346!2.83e-23!90;UBERON:0003075!1.53e-22!86;UBERON:0007284!1.53e-22!86;UBERON:0000924!1.88e-20!173;UBERON:0006601!1.88e-20!173;UBERON:0004121!1.16e-19!169;UBERON:0000033!2.83e-16!123;UBERON:0000153!3.21e-16!129;UBERON:0007811!3.21e-16!129;UBERON:0003076!9.08e-16!15;UBERON:0003057!9.08e-16!15;UBERON:0004732!1.37e-13!13;UBERON:0002780!1.42e-12!41;UBERON:0001890!1.42e-12!41;UBERON:0006240!1.42e-12!41;UBERON:0004733!2.67e-12!12;UBERON:0002028!2.67e-12!12;UBERON:0007277!2.67e-12!12;UBERON:0003080!4.26e-12!42;UBERON:0003056!2.76e-11!61;UBERON:0002020!6.56e-11!34;UBERON:0003528!6.56e-11!34;UBERON:0001893!7.62e-11!34;UBERON:0007023!1.43e-10!115;UBERON:0002791!2.43e-10!33;UBERON:0000475!4.59e-10!365;UBERON:0001869!2.80e-09!32;UBERON:0002680!4.19e-09!9;UBERON:0001895!4.19e-09!9;UBERON:0010092!4.19e-09!9;UBERON:0002200!1.57e-08!11;UBERON:0006876!1.57e-08!11;UBERON:0002097!3.96e-08!40;UBERON:0002199!2.30e-07!45;UBERON:0002416!2.30e-07!45;UBERON:0002298!2.59e-07!8;UBERON:0000956!4.91e-07!25;UBERON:0000203!4.91e-07!25;UBERON:0005174!7.92e-07!5;UBERON:0001137!7.92e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.82e-14;6!UBERON:0004732;3.34e-14;13!UBERON:0006876;3.43e-11;11!UBERON:0005629;4.63e-11;2!UBERON:0005358;4.63e-11;2!UBERON:0001886;4.63e-11;2!UBERON:0004086;4.63e-11;2!UBERON:0005282;4.63e-11;2!UBERON:0005281;4.63e-11;2!UBERON:0004733;7.11e-11;12!UBERON:0002028;7.11e-11;12!UBERON:0005284;9.80e-10;5!UBERON:0002680;1.14e-09;9!UBERON:0001895;1.14e-09;9!UBERON:0003210;3.71e-08;3!UBERON:0002240;1.99e-07;3!UBERON:0005174;1.99e-07;3!UBERON:0001778;1.99e-07;3!UBERON:0001775;1.99e-07;3!UBERON:0001137;1.99e-07;3!UBERON:0001016;2.11e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.19e-16,15;UBERON:0003057,4.19e-16,15;UBERON:0002037,1.62e-14,6;UBERON:0006215,1.62e-14,6;UBERON:0004732,2.85e-14,13;UBERON:0001016,1.16e-13,89;UBERON:0001017,1.19e-13,81;UBERON:0006876,2.67e-11,11;UBERON:0005629,5.83e-11,2;UBERON:0005358,5.83e-11,2;UBERON:0001886,5.83e-11,2;UBERON:0004086,5.83e-11,2;UBERON:0005282,5.83e-11,2;UBERON:0005281,5.83e-11,2;UBERON:0004733,6.10e-11,12;UBERON:0002028,6.10e-11,12;UBERON:0007277,6.10e-11,12;UBERON:0004121,3.97e-10,171;UBERON:0000924,3.97e-10,171;UBERON:0006601,3.97e-10,171;UBERON:0002346,7.67e-10,86;UBERON:0005284,1.03e-09,5;UBERON:0002680,1.06e-09,9;UBERON:0001895,1.06e-09,9;UBERON:0010092,1.06e-09,9;UBERON:0003075,5.59e-09,82;UBERON:0007284,5.59e-09,82;UBERON:0010371,8.33e-09,104;UBERON:0001049,1.30e-08,56;UBERON:0005068,1.30e-08,56;UBERON:0006241,1.30e-08,56;UBERON:0007135,1.30e-08,56;UBERON:0010314,2.86e-08,132;UBERON:0003210,3.65e-08,3;UBERON:0000955,4.66e-08,68;UBERON:0006238,4.66e-08,68;UBERON:0001778,1.29e-07,3;UBERON:0001775,1.29e-07,3;UBERON:0002240,2.06e-07,3;UBERON:0005174,2.06e-07,3;UBERON:0001137,2.06e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,2.95490539384291,0.816002764977012,2.19418305034661,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,1.89069634328136,1.55210578223795,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,2.4217188423189,1.15235184896,0,0,1.1409436430889,0.149448680551801,0.117434498643765,0,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,1.79389635688862,0.213557388818567,0.211931901159562,1.20036438433761,0.721367704669072,2.31876486041066,0.558350568994769,0,0,2.01947019395292,0.552299391853796,0,2.13005755509969,0.403008392910561,0,0,0,0,0,0,0,0.310983165046111,0,0,0,1.92972281457866,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,4.82163662685051,5.23152082599936,0.8800594298514,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,3.08214483825575,0.358121926479791,0,0,0,0,1.52456774533478,1.30139853857622,0.773288812777695,0,0,0,0,0,0.49076596687656,1.50051156317903,0.813795071099207,0,0,0,0,0,0,0,0,0,0.521301686808497,9.39845555821155,6.51972505240626,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.41254749960294,0,0,0,0.676695028044854,0,0.307007349452259,0,0,0,0.340906509664404,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,1.18193840883968,0,0.583209226766509,0,0,0.482385754501632,0,18.1349986287208,6.79759523593159,0.658156191461918,0,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,1.01098527405581,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0,0.288950589901519,0,0.547621515567972,0,0,0,0.279282401272254,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.488105059607853,1.001527445652,0.573409195690071,2.66229723688445,0.558867626472451,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.686791410365586,0,0,0,3.21662387062389,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0.327609848846413,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0.323474434190045,0.943595651135378,0,0,2.12574920101683,0.371807292777007,0,0,0,0,0,0,0.321146125482298,0,0.638535436228605,0.205116364240755,0,0.207471757392654,0.645902582527404,4.28308260777463,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0,0,0.496211178389294,0,0,0,1.68141861109412,0,0,0,0,0,0.747667062745149,0.394636641377094,0,0,0,0.314231179832004,0,0,0,0,0.78624198594322,0,0.581207126840626,0.173858272302579,0,0,0,0,0,0.118332000730565,0.937347452350735,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,0.485710993059139,0,0.198950775161368,0,0.33883824611688,0,0,0,0,0,0,0,0.981542335574726,1.48523200163543,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,0,1.29005624836306,0.788857810965923,0,0.436350690340377,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0,0,0.267964130156178,1.65833887891756,0.724030971033267,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:147126815..147126825,- | |||
}} |
Latest revision as of 16:44, 29 July 2015
Short description: | p@chr3:147126815..147126825, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147126815..147126825, - |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 5.94e-12 | 2 |
fibroblast of choroid plexus | 5.83e-11 | 2 |
leptomeningeal cell | 3.65e-08 | 3 |
astrocyte of the cerebellum | 6.35e-08 | 3 |
ciliated cell | 1.29e-07 | 3 |
ciliated epithelial cell | 1.29e-07 | 3 |
multi-ciliated epithelial cell | 1.29e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.29e-07 | 3 |
skin fibroblast | 2.91e-07 | 23 |