FFCP PHASE1:Hg19::chr3:53925863..53925933,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=F8WAX7 | |||
|association_with_transcript=0bp_to_ENST00000485414,ENST00000487571,ENST00000488746_5end | |||
|cluster_id=chr3:53925863..53925933,- | |||
|coexpression_cluster_id=C4300 | |||
|description=CAGE_peak_1_at_ENST00000485414_5end,CAGE_peak_1_at_ENST00000487571_5end,CAGE_peak_1_at_ENST00000488746_5end | |||
|id=chr3:53925863..53925933,- | |||
|ontology_enrichment_celltype=CL:0000738!1.78e-22!140;CL:0002031!3.43e-18!124;CL:0002087!2.91e-15!119;CL:0000766!3.36e-13!76;CL:0002057!8.59e-13!42;CL:0000860!1.32e-12!45;CL:0000037!5.49e-11!172;CL:0000566!5.49e-11!172;CL:0000988!8.41e-11!182;CL:0000839!1.83e-10!70;CL:0002032!5.61e-10!165;CL:0000837!5.61e-10!165;CL:0000557!1.25e-09!71;CL:0002009!1.66e-08!65;CL:0002194!8.50e-08!63;CL:0000576!8.50e-08!63;CL:0000040!8.50e-08!63;CL:0000559!8.50e-08!63;CL:0000542!1.34e-07!53;CL:0000051!1.34e-07!53;CL:0000838!1.58e-07!52;CL:0000791!3.93e-07!18;CL:0000789!3.93e-07!18;CL:0002420!3.93e-07!18;CL:0002419!3.93e-07!18;CL:0000790!3.93e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-09;33!CL:0002057;2.96e-09;33!CL:0000791;4.07e-07;18!CL:0000789;4.07e-07;18!CL:0002419;4.07e-07;18!CL:0000766;9.08e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.61e-22,136;CL:0002031,5.01e-18,120;CL:0002087,4.38e-15,115;CL:0000766,4.06e-13,72;CL:0000860,8.59e-13,42;CL:0002057,8.59e-13,42;CL:0000473,6.32e-11,48;CL:0000234,6.32e-11,48;CL:0000037,9.50e-11,168;CL:0000988,1.15e-10,177;CL:0000839,2.39e-10,66;CL:0002032,9.57e-10,161;CL:0000837,9.57e-10,161;CL:0000557,1.71e-09,67;CL:0002009,2.29e-08,61;CL:0002194,1.19e-07,59;CL:0000576,1.19e-07,59;CL:0000040,1.19e-07,59;CL:0000559,1.19e-07,59;CL:0000542,1.34e-07,53;CL:0000051,1.34e-07,53;CL:0000838,1.58e-07,52;CL:0000791,3.93e-07,18;CL:0000789,3.93e-07,18;CL:0002420,3.93e-07,18;CL:0002419,3.93e-07,18;CL:0000790,3.93e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.50e-09;42!CL:0000790;4.07e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.34e-14!102;UBERON:0003061!4.34e-14!102;UBERON:0007023!1.93e-12!115;UBERON:0002193!1.12e-10!112;UBERON:0002371!4.55e-10!80;UBERON:0001474!3.34e-09!86;UBERON:0000178!7.87e-09!15;UBERON:0000179!7.87e-09!15;UBERON:0000463!7.87e-09!15;UBERON:0004765!1.17e-08!101;UBERON:0001434!1.17e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.73e-09;15!UBERON:0000179;7.73e-09;15!UBERON:0000463;7.73e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.18e-14,98;UBERON:0003061,6.18e-14,98;UBERON:0007023,2.86e-12,114;UBERON:0002193,1.76e-10,108;UBERON:0002371,6.45e-10,76;UBERON:0001474,4.98e-09,82;UBERON:0000178,7.87e-09,15;UBERON:0000179,7.87e-09,15;UBERON:0000463,7.87e-09,15;UBERON:0004765,2.83e-08,90;UBERON:0001434,1.76e-07,100 | |||
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| |||
|short_description=p1@ENST00000485414,p1@ENST00000487571,p1@ENST00000488746 | |||
}} |
Latest revision as of 02:06, 19 September 2015
Short description: | p1@ENST00000485414, p1@ENST00000487571, p1@ENST00000488746 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000485414_5end, CAGE_peak_1_at_ENST00000487571_5end, CAGE_peak_1_at_ENST00000488746_5end |
Coexpression cluster: | C4300_Basophils_Eosinophils_Mast_CD14_CD34_CD4_CD8 |
Association with transcript: | 0bp_to_ENST00000485414, ENST00000487571, ENST00000488746_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.61e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 5.01e-18 | 120 |
nongranular leukocyte | 4.38e-15 | 115 |
myeloid leukocyte | 4.06e-13 | 72 |
classical monocyte | 8.59e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.59e-13 | 42 |
defensive cell | 6.32e-11 | 48 |
phagocyte | 6.32e-11 | 48 |
hematopoietic stem cell | 9.50e-11 | 168 |
hematopoietic cell | 1.15e-10 | 177 |
myeloid lineage restricted progenitor cell | 2.39e-10 | 66 |
hematopoietic oligopotent progenitor cell | 9.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.57e-10 | 161 |
granulocyte monocyte progenitor cell | 1.71e-09 | 67 |
macrophage dendritic cell progenitor | 2.29e-08 | 61 |
monopoietic cell | 1.19e-07 | 59 |
monocyte | 1.19e-07 | 59 |
monoblast | 1.19e-07 | 59 |
promonocyte | 1.19e-07 | 59 |
lymphocyte | 1.34e-07 | 53 |
common lymphoid progenitor | 1.34e-07 | 53 |
lymphoid lineage restricted progenitor cell | 1.58e-07 | 52 |
mature alpha-beta T cell | 3.93e-07 | 18 |
alpha-beta T cell | 3.93e-07 | 18 |
immature T cell | 3.93e-07 | 18 |
mature T cell | 3.93e-07 | 18 |
immature alpha-beta T cell | 3.93e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.18e-14 | 98 |
blood island | 6.18e-14 | 98 |
adult organism | 2.86e-12 | 114 |
hemolymphoid system | 1.76e-10 | 108 |
bone marrow | 6.45e-10 | 76 |
bone element | 4.98e-09 | 82 |
blood | 7.87e-09 | 15 |
haemolymphatic fluid | 7.87e-09 | 15 |
organism substance | 7.87e-09 | 15 |
skeletal element | 2.83e-08 | 90 |
skeletal system | 1.76e-07 | 100 |