FFCP PHASE1:Hg19::chr3:78809269..78809276,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:78809269..78809276,+ | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_at_chr3:78809269..78809276,+ | |||
|id=chr3:78809269..78809276,+ | |||
|ontology_enrichment_celltype=CL:0000945!8.43e-17!24;CL:0000826!8.43e-17!24;CL:0000946!3.74e-10!1;CL:0000786!3.74e-10!1;CL:0000980!3.74e-10!1;CL:0000838!2.50e-07!52;CL:0000542!3.56e-07!53;CL:0000051!3.56e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.10e-29;24!CL:0000946;1.53e-21;1!CL:0000786;1.53e-21;1!CL:1000415;2.47e-11;2!CL:0000054;3.52e-11;2!CL:0000137;3.52e-11;2!CL:0000092;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.07e-29,24;CL:0000826,1.07e-29,24;CL:0000946,1.53e-21,1;CL:0000786,1.53e-21,1;CL:0000980,1.53e-21,1;CL:0000838,1.01e-13,52;CL:0000542,1.83e-13,53;CL:0000051,1.83e-13,53;CL:0000785,1.82e-11,2;CL:0000955,1.82e-11,2;CL:0000818,1.82e-11,2;CL:0000954,1.82e-11,2;CL:0000816,1.82e-11,2;CL:1000415,2.47e-11,2;CL:0000054,3.02e-11,2;CL:0000137,3.02e-11,2;CL:0000092,3.02e-11,2;CL:0002032,1.75e-09,161;CL:0000837,1.75e-09,161;CL:0000037,4.55e-09,168;CL:0000988,1.39e-08,177;CL:0002087,3.67e-08,115;CL:0000817,4.52e-08,3;CL:0002031,8.25e-08,120;CL:0000738,7.42e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.82e-11;2 | |||
|ontology_enrichment_disease=DOID:630!4.46e-10!1;DOID:0050177!4.46e-10!1;DOID:0050427!4.46e-10!1;DOID:2355!5.31e-10!1;DOID:0060085!5.79e-10!1;DOID:3165!5.79e-10!1;DOID:0060121!5.79e-10!1;DOID:2438!5.79e-10!1;DOID:4418!5.79e-10!1;DOID:1036!6.93e-10!8;DOID:3112!1.06e-09!1;DOID:2531!2.71e-07!51;DOID:0060083!2.71e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:630;2.30e-21;1!DOID:0050177;2.30e-21;1!DOID:0050427;2.30e-21;1!DOID:0060085;5.71e-21;1!DOID:3165;5.71e-21;1!DOID:0060121;5.71e-21;1!DOID:2438;5.71e-21;1!DOID:4418;5.71e-21;1!DOID:2355;5.71e-21;1!DOID:74;3.52e-11;2!DOID:200;3.52e-11;2!DOID:4305;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.30e-21,1;DOID:0050177,2.30e-21,1;DOID:0050427,2.30e-21,1;DOID:2355,3.45e-21,1;DOID:0060085,4.22e-21,1;DOID:3165,4.22e-21,1;DOID:0060121,4.22e-21,1;DOID:2438,4.22e-21,1;DOID:4418,4.22e-21,1;DOID:74,2.73e-11,2;DOID:200,3.02e-11,2;DOID:4305,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.41e-07!5;UBERON:0004117!1.41e-07!5;UBERON:0007689!1.41e-07!5;UBERON:0007123!1.41e-07!5;UBERON:0003091!1.41e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;5.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,5.54e-08,3;UBERON:0006242,5.54e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.23150884174919,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,1.08182271390393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2625158771726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,1.51802986179348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78843150532691,0,0,2.08412932653988,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94748663751304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6736812836403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,7.37307532297436 | |||
|short_description=p@chr3:78809269..78809276,+ | |||
}} |
Latest revision as of 23:40, 29 July 2015
Short description: | p@chr3:78809269..78809276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:78809269..78809276, + |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.07e-29 | 24 |
pro-B cell | 1.07e-29 | 24 |
antibody secreting cell | 1.53e-21 | 1 |
plasma cell | 1.53e-21 | 1 |
plasmablast | 1.53e-21 | 1 |
lymphoid lineage restricted progenitor cell | 1.01e-13 | 52 |
lymphocyte | 1.83e-13 | 53 |
common lymphoid progenitor | 1.83e-13 | 53 |
mature B cell | 1.82e-11 | 2 |
pre-B-II cell | 1.82e-11 | 2 |
transitional stage B cell | 1.82e-11 | 2 |
small pre-B-II cell | 1.82e-11 | 2 |
immature B cell | 1.82e-11 | 2 |
epithelial cell of gall bladder | 2.47e-11 | 2 |
bone matrix secreting cell | 3.02e-11 | 2 |
osteocyte | 3.02e-11 | 2 |
osteoclast | 3.02e-11 | 2 |
hematopoietic oligopotent progenitor cell | 1.75e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-09 | 161 |
hematopoietic stem cell | 4.55e-09 | 168 |
hematopoietic cell | 1.39e-08 | 177 |
nongranular leukocyte | 3.67e-08 | 115 |
precursor B cell | 4.52e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.25e-08 | 120 |
leukocyte | 7.42e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 5.54e-08 | 3 |
gall bladder primordium | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.30e-21 | 1 |
monogenic disease | 2.30e-21 | 1 |
xeroderma pigmentosum | 2.30e-21 | 1 |
anemia | 3.45e-21 | 1 |
organ system benign neoplasm | 4.22e-21 | 1 |
skin benign neoplasm | 4.22e-21 | 1 |
integumentary system benign neoplasm | 4.22e-21 | 1 |
dermis tumor | 4.22e-21 | 1 |
cutaneous fibrous histiocytoma | 4.22e-21 | 1 |
hematopoietic system disease | 2.73e-11 | 2 |
giant cell tumor | 3.02e-11 | 2 |
bone giant cell tumor | 3.02e-11 | 2 |