FFCP PHASE1:Hg19::chr4:10118001..10118022,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12754 | |||
|TSSclassifier=strong | |||
|UniProt=D6RD66 | |||
|association_with_transcript=-38bp_to_ENST00000508079_5end | |||
|cluster_id=chr4:10118001..10118022,- | |||
|coexpression_cluster_id=C2766 | |||
|description=CAGE_peak_7_at_WDR1_5end | |||
|id=chr4:10118001..10118022,- | |||
|ontology_enrichment_celltype=CL:0000055!2.03e-35!180;CL:0000222!6.82e-33!119;CL:0000057!1.30e-21!75;CL:0000144!4.43e-20!625;CL:0002371!4.58e-20!591;CL:0000192!2.52e-18!42;CL:0000514!2.52e-18!42;CL:0000680!3.79e-18!57;CL:0000056!3.79e-18!57;CL:0000355!3.79e-18!57;CL:0000183!6.92e-18!59;CL:0000187!3.75e-17!54;CL:0000359!4.33e-17!32;CL:0000048!4.11e-16!430;CL:0000393!2.52e-15!60;CL:0000211!2.52e-15!60;CL:0000723!2.87e-15!436;CL:0000220!4.44e-15!246;CL:0002321!1.96e-14!248;CL:0000548!3.35e-14!679;CL:0000004!3.35e-14!679;CL:0000255!3.35e-14!679;CL:0000034!7.92e-14!444;CL:0000213!8.24e-14!57;CL:0000215!8.24e-14!57;CL:0000012!1.05e-13!682;CL:0002139!1.86e-10!24;CL:0002078!2.12e-10!44;CL:0000115!5.66e-10!35;CL:0000071!9.16e-09!18;CL:0002546!9.16e-09!18;CL:0000003!8.61e-08!722;CL:0002620!3.55e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.17e-20;32!CL:0000192;4.15e-16;43!CL:0002139;8.60e-12;24!CL:0000057;3.42e-11;73!CL:0000115;6.18e-11;36!CL:0000213;8.30e-10;58!CL:0000215;8.30e-10;58!CL:0000187;8.76e-10;55!CL:0000071;1.36e-09;18!CL:0002078;5.90e-09;45!CL:0002334;2.21e-08;12!CL:0002620;1.46e-07;23!CL:0000393;2.03e-07;61!CL:0000211;2.03e-07;61!CL:0002494;3.98e-07;16!CL:0002320;7.68e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.96e-37,121;CL:0000057,1.96e-27,76;CL:0000192,1.14e-22,43;CL:0000514,1.14e-22,43;CL:0000048,3.77e-22,427;CL:0000359,7.66e-22,32;CL:0000723,5.30e-21,433;CL:0000680,7.32e-20,58;CL:0000056,7.32e-20,58;CL:0000355,7.32e-20,58;CL:0000034,1.56e-19,441;CL:0000187,1.56e-18,55;CL:0000393,1.31e-16,61;CL:0000211,1.31e-16,61;CL:0000213,3.10e-16,58;CL:0000215,3.10e-16,58;CL:0002321,4.61e-13,250;CL:0000115,6.55e-13,36;CL:0002078,2.30e-12,45;CL:0002139,3.41e-12,24;CL:0000071,7.96e-10,18;CL:0002546,7.96e-10,18;CL:0002334,2.20e-08,12;CL:0002620,1.44e-07,23;CL:0002494,4.12e-07,16;CL:0002320,4.72e-07,361;CL:0000134,4.86e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;4.15e-16;43!CL:0000222;5.65e-10;121!CL:0002546;1.36e-09;18!CL:0000355;2.10e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.10e-29!79;UBERON:0007798!5.10e-29!79;UBERON:0000055!2.70e-25!69;UBERON:0001981!2.64e-23!60;UBERON:0007500!2.64e-23!60;UBERON:0004537!2.64e-23!60;UBERON:0006965!2.64e-23!60;UBERON:0004872!6.20e-23!84;UBERON:0004535!1.04e-22!110;UBERON:0001009!3.37e-21!113;UBERON:0001637!1.46e-20!42;UBERON:0003509!1.46e-20!42;UBERON:0004572!1.46e-20!42;UBERON:0000914!2.52e-18!83;UBERON:0002329!2.52e-18!83;UBERON:0003077!2.52e-18!83;UBERON:0003059!2.52e-18!83;UBERON:0007282!2.52e-18!83;UBERON:0009618!2.52e-18!83;UBERON:0007285!2.52e-18!83;UBERON:0003914!9.75e-18!118;UBERON:0004290!3.16e-17!70;UBERON:0004573!1.36e-15!33;UBERON:0004571!1.36e-15!33;UBERON:0001134!2.64e-15!61;UBERON:0002036!2.64e-15!61;UBERON:0003082!2.64e-15!61;UBERON:0002385!5.27e-15!63;UBERON:0001015!5.27e-15!63;UBERON:0000383!5.27e-15!63;UBERON:0005256!9.26e-15!143;UBERON:0000486!2.81e-14!82;UBERON:0003081!5.31e-14!216;UBERON:0000490!1.06e-13!138;UBERON:0002204!1.01e-12!167;UBERON:0000926!2.19e-12!448;UBERON:0004120!2.19e-12!448;UBERON:0006603!2.19e-12!448;UBERON:0002100!5.40e-09!216;UBERON:0000947!5.85e-09!21;UBERON:0010191!5.85e-09!21;UBERON:0001986!9.16e-09!18;UBERON:0004638!9.16e-09!18;UBERON:0004852!9.16e-09!18;UBERON:0000468!2.17e-08!659;UBERON:0000487!1.10e-07!22;UBERON:0000467!1.14e-07!625;UBERON:0006914!1.37e-07!25;UBERON:0000480!1.73e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.56e-18;42!UBERON:0003509;2.56e-18;42!UBERON:0004572;2.56e-18;42!UBERON:0007500;4.86e-17;56!UBERON:0001981;4.86e-17;56!UBERON:0004537;4.86e-17;56!UBERON:0004573;9.02e-17;33!UBERON:0004571;9.02e-17;33!UBERON:0000055;1.33e-15;65!UBERON:0002049;1.12e-14;75!UBERON:0007798;1.12e-14;75!UBERON:0003914;2.99e-11;74!UBERON:0004638;1.36e-09;18!UBERON:0001986;1.36e-09;18!UBERON:0004852;1.36e-09;18!UBERON:0000947;1.58e-09;21!UBERON:0010191;1.58e-09;21!UBERON:0006914;9.72e-09;25!UBERON:0001009;1.50e-08;112!UBERON:0004535;1.69e-08;109!UBERON:0000487;1.79e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.09e-34,78;UBERON:0007798,5.09e-34,78;UBERON:0000055,9.62e-31,68;UBERON:0004535,5.10e-28,109;UBERON:0007500,1.61e-27,59;UBERON:0001981,1.61e-27,59;UBERON:0004537,1.61e-27,59;UBERON:0006965,1.61e-27,59;UBERON:0001009,1.85e-26,112;UBERON:0004872,1.91e-25,83;UBERON:0001637,3.75e-25,42;UBERON:0003509,3.75e-25,42;UBERON:0004572,3.75e-25,42;UBERON:0007503,4.54e-21,78;UBERON:0003914,1.32e-19,117;UBERON:0002329,6.24e-19,71;UBERON:0003059,6.24e-19,71;UBERON:0007282,6.24e-19,71;UBERON:0004290,6.24e-19,71;UBERON:0009618,6.24e-19,71;UBERON:0007524,7.83e-19,73;UBERON:0004573,2.05e-18,33;UBERON:0004571,2.05e-18,33;UBERON:0003077,2.14e-18,72;UBERON:0007285,2.14e-18,72;UBERON:0001134,1.95e-17,62;UBERON:0002036,1.95e-17,62;UBERON:0003082,1.95e-17,62;UBERON:0002385,4.55e-17,64;UBERON:0001015,4.55e-17,64;UBERON:0000383,4.55e-17,64;UBERON:0000926,1.38e-16,315;UBERON:0004120,1.38e-16,315;UBERON:0006603,1.38e-16,315;UBERON:0000490,1.07e-15,148;UBERON:0000486,4.03e-15,83;UBERON:0005256,2.51e-13,122;UBERON:0003081,6.78e-11,203;UBERON:0004638,7.96e-10,18;UBERON:0001986,7.96e-10,18;UBERON:0004852,7.96e-10,18;UBERON:0000947,1.42e-09,21;UBERON:0010191,1.42e-09,21;UBERON:0003104,1.53e-09,160;UBERON:0009142,1.53e-09,160;UBERON:0006914,5.66e-09,25;UBERON:0002204,1.05e-08,167;UBERON:0000487,1.13e-08,22;UBERON:0002384,2.14e-07,371;UBERON:0002100,3.27e-07,199 | |||
|phase1_expression=6.90377841228115,3.42560838225573,4.22863212287913,14.0102617694383,3.12872766099101,3.48935409640147,0,2.52687949370732,0,1.22866968250754,0,0.436882744260345,2.11013582582763,0.866364470720326,1.32558950291166,3.36162573225888,1.80808358407193,2.92124036154949,0.975865597581014,0.738726348460727,2.85600967741954,2.5076377718247,0.286235987131057,0.547497700291537,0.753255837568817,0,0.164201178899891,0.157421562627358,0,0,0,0,0.6024118375565,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0.872389432677388,0.755751887377619,0.970336244751265,0.929716147622738,0.411167888021826,1.54853185447552,0.863077176966451,1.0246428261164,0.709446689665756,2.06847408441971,0.645484683583826,0,0.752969358170419,1.36453075028923,1.57306439111559,1.83650335422542,0.641858054152187,2.55734850319616,0.659702600373432,0,0.426224750532694,3.48251086354301,3.40431134814684,6.22822248995575,0.502497330513487,1.5644487552606,0.217188844705117,0.605399502633369,0.736555271975129,2.53169909952708,0.211255286311942,0.425208599930087,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,1.34140171940727,3.45228916977532,2.53007406669196,1.50401373190767,1.59331170856906,0,0.486634870302636,0.661743720148475,1.77383517970051,1.22968699970376,0.589405839739707,0.728590576585084,0.370784442784429,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,8.34802110940161,2.58070378531837,5.9013885273291,7.34900324501212,7.55098985177831,6.05259692268148,6.68783892917794,1.8089173141853,2.84613010149368,1.33888245105868,6.44526907374635,3.80136052859256,4.88124115096339,4.04429388380456,0.81014194788176,1.7859945656816,0.673588117878509,1.91439516821648,7.66583187329416,4.74632829784064,4.03043836646896,1.31780417436063,0,0.436094052142534,7.45457927542978,7.47120018821021,3.57504788195691,2.29469296599051,2.4826786753885,8.97084160227691,2.1349799145941,4.9333509683432,3.42332138939743,2.55950276932407,4.90385709340376,2.4217188423189,0.576175924479999,1.40592859100278,1.24864030732128,2.85235910772225,2.24173020827702,0.117434498643765,0.647491777472526,0.561803226808994,1.02077085627447,1.10550885580591,1.03325781175765,5.94001428641027,5.19260551484969,5.46096817162816,5.74894513452991,1.17835279767846,0.375355559615893,1.6623846929051,5.70670907145089,10.1140972613676,4.35690370829131,2.94923676216055,3.40840307808838,2.13557388818567,2.7551147150743,4.80145753735044,1.54578793857658,2.83404594050192,2.97786970130544,5.90717162844432,4.38466523225394,5.04867548488229,2.76149695926898,1.45481451136931,6.74518225781567,6.64963848302426,8.81715080014536,0.773043412653187,0.545492241181669,0.860413786167011,0,0,0,0.10366105501537,0.252320850875628,0,15.6449532329816,10.935095949279,5.52539685409922,3.25057549622385,2.16563844500876,0.709840800239063,0.505754070234305,0.241011029883482,0.220587945464788,0.653638332277218,0.237270619111097,0.134831308160164,0.784885860501384,0,2.95262181849859,8.41450642820675,2.057870056657,5.88034845542168,0,0,0.590789906681404,0,0,1.54411029268673,0.329250856225877,0,0.100528972411631,0.0925884451585296,1.3032332212413,1.03993478527958,0,0.34779121492523,2.34817388471643,3.17606185074362,6.01881166349594,1.90254152234598,0,0,0.492434012174795,0.702012795417713,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0,0.581267877027924,0.766765358330422,12.3165809473986,0.616339038092582,0.414656231081544,0.288239906833923,0.12624243342638,0.888970520090367,0,3.51652341630141,0,0.205654985406647,0.300343057843917,0.285826432630578,3.47606361470618,1.74384027533312,3.59357600522655,2.32689088364,3.57656445851882,0,2.92531928243358,4.16029747645464,2.57207374262142,1.41849132023278,2.39779961114489,0.714889968290738,1.08524321078289,0.823240336780769,0.325736184293735,1.77695974371273,0,0.904318131178758,8.71533458600294,5.59848750619519,0,1.00451418286425,0,9.34536936417172,1.14861935834114,1.42636905040718,4.1986578933598,2.87666851570537,1.61154866915906,0.224170287987055,0,0.215627574859517,0.128343036279748,0.508189248444927,0,1.54657762555539,0.167516265334349,1.27587750330633,0,0,0.414415513436035,0.858840442033979,1.50051156317903,1.89885516589815,5.61521326133179,5.17444067511769,3.6271555457805,7.73133338951907,8.42649079237613,2.27407504055985,2.0694614258501,6.64225598535437,2.58116835958384,2.78027566297865,0.979005787313703,0.343143423810856,0,0,0.213455115606889,0.606255142892519,0,0.604780586659361,4.46594054073798,7.51963669111506,5.89386198309454,2.94720043288112,6.14048698880044,9.32952742632923,8.90508398669946,2.31314540703983,1.24293207719189,2.95657761649713,2.07701771673448,3.60252173225874,0,1.40354529212299,0,3.90369123759663,4.00600569614778,5.11385218341754,0,0.0770153371044148,0,1.46139224653261,0,2.27466768141793,2.38131187387122,3.454654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| |||
|short_description=p7@WDR1 | |||
}} |
Latest revision as of 02:36, 20 September 2015
Short description: | p7@WDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_WDR1_5end |
Coexpression cluster: | C2766_Smooth_Hair_spindle_leiomyoma_Endothelial_bone_Multipotent |
Association with transcript: | -38bp_to_ENST00000508079_5end |
EntrezGene: | WDR1 |
HGNC: | 12754 |
UniProt: | D6RD66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.96e-37 | 121 |
fibroblast | 1.96e-27 | 76 |
smooth muscle cell | 1.14e-22 | 43 |
smooth muscle myoblast | 1.14e-22 | 43 |
multi fate stem cell | 3.77e-22 | 427 |
vascular associated smooth muscle cell | 7.66e-22 | 32 |
somatic stem cell | 5.30e-21 | 433 |
muscle precursor cell | 7.32e-20 | 58 |
myoblast | 7.32e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.32e-20 | 58 |
stem cell | 1.56e-19 | 441 |
muscle cell | 1.56e-18 | 55 |
electrically responsive cell | 1.31e-16 | 61 |
electrically active cell | 1.31e-16 | 61 |
lining cell | 3.10e-16 | 58 |
barrier cell | 3.10e-16 | 58 |
embryonic cell | 4.61e-13 | 250 |
endothelial cell | 6.55e-13 | 36 |
meso-epithelial cell | 2.30e-12 | 45 |
endothelial cell of vascular tree | 3.41e-12 | 24 |
blood vessel endothelial cell | 7.96e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.96e-10 | 18 |
preadipocyte | 2.20e-08 | 12 |
skin fibroblast | 1.44e-07 | 23 |
cardiocyte | 4.12e-07 | 16 |
connective tissue cell | 4.72e-07 | 361 |
mesenchymal cell | 4.86e-07 | 354 |