FFCP PHASE1:Mm9::chr15:102751603..102751630,+: Difference between revisions
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{{FFCP|EntrezGene=15422|HGNC=|MCL_coexpression_id=25|UniProt=P50207|association_with_transcript=41bp_to_NM_010464,uc007xwv.1_5end|description=CAGE_peak_1_at_Hoxc13_5end|id=chr15:102751603..102751630,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,4.69e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!2.98e-08!5;UBERON:0001003!2.98e-08!5;UBERON:0002097!2.98e-08!5;UBERON:0002199!2.98e-08!5;UBERON:0007029!2.98e-08!5;UBERON:0007376!2.98e-08!5;UBERON:0002416!2.98e-08!5;UBERON:0007383!2.98e-08!5;UBERON:0002102!3.12e-08!8;UBERON:0004710!3.12e-08!8;UBERON:0005419!3.12e-08!8;UBERON:0005417!3.12e-08!8;UBERON:0005729!3.12e-08!8;UBERON:0003102!3.68e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.31e-14,22;UBERON:0002102,3.72e-14,7;UBERON:0004710,3.72e-14,7;UBERON:0005419,3.72e-14,7;UBERON:0005417,3.72e-14,7;UBERON:0005729,3.72e-14,7;UBERON:0010708,3.09e-12,8;UBERON:0000014,5.51e-12,5;UBERON:0001003,5.51e-12,5;UBERON:0002097,5.51e-12,5;UBERON:0002199,5.51e-12,5;UBERON:0007029,5.51e-12,5;UBERON:0007376,5.51e-12,5;UBERON:0002416,5.51e-12,5;UBERON:0007383,5.51e-12,5;UBERON:0000026,9.16e-08,12;UBERON:0004708,9.16e-08,12;UBERON:0002101,9.16e-08,12;UBERON:0004357,9.16e-08,12;UBERON:0004347,9.16e-08,12;UBERON:0005732,9.16e-08,12;UBERON:0005733,9.16e-08,12;UBERON:0010707,4.44e-07,13;UBERON:0002257,4.69e-07,3;UBERON:0001948,7.90e-07,5;UBERON:0002315,7.90e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,2.8419204597844,0,0,0,0,0,2.28520787523043,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0173719061047,10.8202477407318,8.38797506213853,0,0,0,0,0,0,0,0,0.140444420131752,29.484445806004,17.6654483129951,23.3204119176825,0,26.9485602570067,15.2883143823987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,3.88022387279116,4.53854592402766,4.22282697993477,6.57587197282724,11.1218899690239,14.2783388274088,16.4625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,104.208111859015,14.6932628293274,56.8147752823228,134.293887003529,191.716570902232,0,0,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,17.2315091547561,0.887943813496259,0.538283139656854,1.67884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,1.3492355185943,4.78829848081237,3.07320490357441,0.729320151204882,3.77303692730368,2.5738091183002,0.888986911206461,1.23621034343337,0.64183841918363,1.51618327058278,0,0.754505365544305,0.842773567228942,0.960377286073039,0.689225627467359,0.476293691283074,0.579421629724277,0.38581844092741,0.824171801606613,0.883193520806384,0.685738504770831,1.24233064311536,1.66905332963125,0.872078499793971,0.658765662907314,1.09998990259179,1.28049581010941,1.31534855718921,0.814824683075171,1.68342681497322,0.711810108745045,0.591026894253381,1.22769312950907,0.619747364743864,1.15743966588685,3.74715866906919,3.74290573512653,4.51229213501426,4.20834330551455,17.6473135295612,2.31867835620421|short_description=p1@Hoxc13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15422 | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|TSSclassifier=NA | |||
|UniProt=P50207 | |||
|association_with_transcript=41bp_to_NM_010464,uc007xwv.1_5end | |||
|cluster_id=chr15:102751603..102751630,+ | |||
|description=CAGE_peak_1_at_Hoxc13_5end | |||
|id=chr15:102751603..102751630,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,4.69e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!2.98e-08!5;UBERON:0001003!2.98e-08!5;UBERON:0002097!2.98e-08!5;UBERON:0002199!2.98e-08!5;UBERON:0007029!2.98e-08!5;UBERON:0007376!2.98e-08!5;UBERON:0002416!2.98e-08!5;UBERON:0007383!2.98e-08!5;UBERON:0002102!3.12e-08!8;UBERON:0004710!3.12e-08!8;UBERON:0005419!3.12e-08!8;UBERON:0005417!3.12e-08!8;UBERON:0005729!3.12e-08!8;UBERON:0003102!3.68e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.31e-14,22;UBERON:0002102,3.72e-14,7;UBERON:0004710,3.72e-14,7;UBERON:0005419,3.72e-14,7;UBERON:0005417,3.72e-14,7;UBERON:0005729,3.72e-14,7;UBERON:0010708,3.09e-12,8;UBERON:0000014,5.51e-12,5;UBERON:0001003,5.51e-12,5;UBERON:0002097,5.51e-12,5;UBERON:0002199,5.51e-12,5;UBERON:0007029,5.51e-12,5;UBERON:0007376,5.51e-12,5;UBERON:0002416,5.51e-12,5;UBERON:0007383,5.51e-12,5;UBERON:0000026,9.16e-08,12;UBERON:0004708,9.16e-08,12;UBERON:0002101,9.16e-08,12;UBERON:0004357,9.16e-08,12;UBERON:0004347,9.16e-08,12;UBERON:0005732,9.16e-08,12;UBERON:0005733,9.16e-08,12;UBERON:0010707,4.44e-07,13;UBERON:0002257,4.69e-07,3;UBERON:0001948,7.90e-07,5;UBERON:0002315,7.90e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,2.8419204597844,0,0,0,0,0,2.28520787523043,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0173719061047,10.8202477407318,8.38797506213853,0,0,0,0,0,0,0,0,0.140444420131752,29.484445806004,17.6654483129951,23.3204119176825,0,26.9485602570067,15.2883143823987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,3.88022387279116,4.53854592402766,4.22282697993477,6.57587197282724,11.1218899690239,14.2783388274088,16.4625709126355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,104.208111859015,14.6932628293274,56.8147752823228,134.293887003529,191.716570902232,0,0,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,17.2315091547561,0.887943813496259,0.538283139656854,1.67884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,1.3492355185943,4.78829848081237,3.07320490357441,0.729320151204882,3.77303692730368,2.5738091183002,0.888986911206461,1.23621034343337,0.64183841918363,1.51618327058278,0,0.754505365544305,0.842773567228942,0.960377286073039,0.689225627467359,0.476293691283074,0.579421629724277,0.38581844092741,0.824171801606613,0.883193520806384,0.685738504770831,1.24233064311536,1.66905332963125,0.872078499793971,0.658765662907314,1.09998990259179,1.28049581010941,1.31534855718921,0.814824683075171,1.68342681497322,0.711810108745045,0.591026894253381,1.22769312950907,0.619747364743864,1.15743966588685,3.74715866906919,3.74290573512653,4.51229213501426,4.20834330551455,17.6473135295612,2.31867835620421 | |||
|short_description=p1@Hoxc13 | |||
}} |
Latest revision as of 14:41, 26 September 2015
Short description: | p1@Hoxc13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hoxc13_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | 41bp_to_NM_010464, uc007xwv.1_5end |
EntrezGene: | Hoxc13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 4.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.31e-14 | 22 |
forelimb | 3.72e-14 | 7 |
pectoral appendage | 3.72e-14 | 7 |
pectoral appendage bud | 3.72e-14 | 7 |
forelimb bud | 3.72e-14 | 7 |
forelimb/pectoral fin field | 3.72e-14 | 7 |
pectoral complex | 3.09e-12 | 8 |
zone of skin | 5.51e-12 | 5 |
skin epidermis | 5.51e-12 | 5 |
skin of body | 5.51e-12 | 5 |
integument | 5.51e-12 | 5 |
surface | 5.51e-12 | 5 |
outer epithelium | 5.51e-12 | 5 |
integumental system | 5.51e-12 | 5 |
enveloping layer of ectoderm | 5.51e-12 | 5 |
appendage | 9.16e-08 | 12 |
paired limb/fin | 9.16e-08 | 12 |
limb | 9.16e-08 | 12 |
paired limb/fin bud | 9.16e-08 | 12 |
limb bud | 9.16e-08 | 12 |
limb/fin field | 9.16e-08 | 12 |
limb field | 9.16e-08 | 12 |
appendage girdle complex | 4.44e-07 | 13 |
ventral horn of spinal cord | 4.69e-07 | 3 |
regional part of spinal cord | 7.90e-07 | 5 |
gray matter of spinal cord | 7.90e-07 | 5 |