FFCP PHASE1:Hg19::chr4:187544379..187544383,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_BC016998_5end | |||
|cluster_id=chr4:187544379..187544383,- | |||
|description=CAGE_peak_1_at_BC016998_5end | |||
|id=chr4:187544379..187544383,- | |||
|ontology_enrichment_celltype=CL:0000057!4.02e-22!75;CL:0000055!2.21e-15!180;CL:0000077!5.51e-13!19;CL:0002620!5.94e-10!23;CL:0002334!1.96e-09!12;CL:1000306!1.06e-07!4;CL:0002547!1.06e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.10e-12;1!CL:0000306;2.24e-11;4!CL:0002222;2.24e-11;4!CL:0002224;2.24e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.77e-11,4;CL:0002222,2.77e-11,4;CL:0002224,2.77e-11,4;CL:0002097,9.96e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;9.10e-12;1!DOID:3571;9.10e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,5.05e-12,1;DOID:3571,6.26e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000415!1.06e-07!4;UBERON:0007240!1.06e-07!4;UBERON:0005742!1.06e-07!4;UBERON:0005734!1.06e-07!4;UBERON:0004664!1.06e-07!4;UBERON:0004663!1.06e-07!4;UBERON:0002199!2.48e-07!45;UBERON:0002416!2.48e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.24e-11;4!UBERON:0005389;2.24e-11;4!UBERON:0000484;2.24e-11;4!UBERON:0000965;2.24e-11;4!UBERON:0001803;2.24e-11;4!UBERON:0003688;4.73e-08;6!UBERON:0002358;4.73e-08;6!UBERON:0003684;4.73e-08;6!UBERON:0001178;4.73e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,2.77e-11,4;UBERON:0005389,2.77e-11,4;UBERON:0000484,2.77e-11,4;UBERON:0002546,2.77e-11,4;UBERON:0000965,2.77e-11,4;UBERON:0001803,2.77e-11,4;UBERON:0003073,2.77e-11,4;UBERON:0005426,2.77e-11,4;UBERON:0003688,5.74e-08,6;UBERON:0002358,5.74e-08,6;UBERON:0003684,5.74e-08,6;UBERON:0001178,5.74e-08,6 | |||
|phase1_expression=1.99846217197612,0.642301571672949,0,3.00219895059391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0.269421344139376,0.653847612453835,0,0,0,0,1.1409436430889,0,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0.340296549480063,1.4351170855109,0,0,0,0.206105058476878,0.257640540045629,0.558350568994769,0.675105328965065,0.0974370051611986,1.00973509697646,0,0,0.710019185033229,0.503760491138201,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,2.31650090668127,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,2.14846762603287,0,0,1.02341449813341,0.64341568457443,0,0.462629081407967,0.355123450626254,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0,0.563391205064483,0,0.491245205065606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.63718706865481,0,0,0,0.265841714557995,0,0,0,1.22061219961398,0,0.322231671127465,0,0.398095888698616,0,0,0,1.26184898228651,0.192619830407303,2.57329909649911,0,0,0.463044948647668,0,2.68633261622231,0.617602894321944,0.657852148736121,0.353378291891762,1.54331230616732,0.675769762612291,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC016998 | |||
}} |
Latest revision as of 04:10, 30 July 2015
Short description: | p1@BC016998 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC016998_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_BC016998_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.77e-11 | 4 |
vertebrate lens cell | 2.77e-11 | 4 |
lens epithelial cell | 2.77e-11 | 4 |
cortical cell of adrenal gland | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 2.77e-11 | 4 |
transparent eye structure | 2.77e-11 | 4 |
simple cuboidal epithelium | 2.77e-11 | 4 |
cranial placode | 2.77e-11 | 4 |
lens of camera-type eye | 2.77e-11 | 4 |
epithelium of lens | 2.77e-11 | 4 |
lens placode | 2.77e-11 | 4 |
lens vesicle | 2.77e-11 | 4 |
omentum | 5.74e-08 | 6 |
peritoneum | 5.74e-08 | 6 |
abdominal cavity | 5.74e-08 | 6 |
visceral peritoneum | 5.74e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 5.05e-12 | 1 |
liver cancer | 6.26e-12 | 1 |