FFCP PHASE1:Mm9::chr15:97741033..97741048,-: Difference between revisions
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{{FFCP|EntrezGene=22337|HGNC=|MCL_coexpression_id=46|UniProt=G3UZP9,G3UXG5|association_with_transcript=12bp_to_ENSMUST00000173104,ENSMUST00000174633_5end|description=CAGE_peak_3_at_Vdr_5end|id=chr15:97741033..97741048,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001911!3.41e-30!2;UBERON:0000076!3.41e-30!2;UBERON:0005333!3.41e-30!2;UBERON:0008425!3.41e-30!2;UBERON:0005311!3.41e-30!2;UBERON:0000305!3.44e-16!1|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.41e-58,2;UBERON:0000076,6.41e-58,2;UBERON:0005333,6.41e-58,2;UBERON:0008425,6.41e-58,2;UBERON:0005311,6.41e-58,2;UBERON:0000305,2.87e-30,1;UBERON:0003100,1.36e-11,11;UBERON:0005631,4.56e-11,3;UBERON:0000478,4.56e-11,3;UBERON:0000158,4.56e-11,3;UBERON:0004871,4.56e-11,3;UBERON:0005085,5.52e-10,13;UBERON:0005153,6.83e-08,17;UBERON:0005157,7.26e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4610816766405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86822836830458,4.41498794087572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0,0,0,0,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Vdr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22337 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt=G3UZP9,G3UXG5 | |||
|association_with_transcript=12bp_to_ENSMUST00000173104,ENSMUST00000174633_5end | |||
|cluster_id=chr15:97741033..97741048,- | |||
|description=CAGE_peak_3_at_Vdr_5end | |||
|id=chr15:97741033..97741048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!3.41e-30!2;UBERON:0000076!3.41e-30!2;UBERON:0005333!3.41e-30!2;UBERON:0008425!3.41e-30!2;UBERON:0005311!3.41e-30!2;UBERON:0000305!3.44e-16!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.41e-58,2;UBERON:0000076,6.41e-58,2;UBERON:0005333,6.41e-58,2;UBERON:0008425,6.41e-58,2;UBERON:0005311,6.41e-58,2;UBERON:0000305,2.87e-30,1;UBERON:0003100,1.36e-11,11;UBERON:0005631,4.56e-11,3;UBERON:0000478,4.56e-11,3;UBERON:0000158,4.56e-11,3;UBERON:0004871,4.56e-11,3;UBERON:0005085,5.52e-10,13;UBERON:0005153,6.83e-08,17;UBERON:0005157,7.26e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4610816766405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86822836830458,4.41498794087572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0,0,0,0,0.419437377702843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Vdr | |||
}} |
Latest revision as of 12:41, 1 October 2015
Short description: | p3@Vdr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vdr_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 12bp_to_ENSMUST00000173104, ENSMUST00000174633_5end |
EntrezGene: | Vdr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 6.41e-58 | 2 |
external ectoderm | 6.41e-58 | 2 |
mammary bud | 6.41e-58 | 2 |
mammary ridge | 6.41e-58 | 2 |
mammary placode | 6.41e-58 | 2 |
amnion | 2.87e-30 | 1 |
female organism | 1.36e-11 | 11 |
extraembryonic membrane | 4.56e-11 | 3 |
extraembryonic structure | 4.56e-11 | 3 |
membranous layer | 4.56e-11 | 3 |
somatic layer of lateral plate mesoderm | 4.56e-11 | 3 |
ectodermal placode | 5.52e-10 | 13 |
epithelial bud | 6.83e-08 | 17 |
epithelial fold | 7.26e-07 | 20 |