FFCP PHASE1:Hg19::chr4:90856951..90856962,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:90856951..90856962,+ | |||
|description=CAGE_peak_at_chr4:90856951..90856962,+ | |||
|id=chr4:90856951..90856962,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.10e-39!24;CL:0000115!9.70e-32!35;CL:0002078!3.46e-24!44;CL:0000071!1.28e-21!18;CL:0002546!1.28e-21!18;CL:0005020!2.66e-21!6;CL:0002138!2.66e-21!6;CL:0005022!2.66e-21!6;CL:0000213!1.63e-17!57;CL:0000215!1.63e-17!57;CL:0002144!2.16e-11!3;CL:0002618!3.49e-11!3;CL:0002544!8.67e-10!6;CL:0002543!1.35e-09!6;CL:0002545!2.84e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.12e-70;24!CL:0002138;9.84e-59;6!CL:0000115;3.41e-36;36!CL:0002545;4.54e-29;2!CL:0002078;3.71e-28;45!CL:0000071;5.66e-28;18!CL:0002544;9.89e-22;6!CL:0002144;5.11e-20;3!CL:0000213;6.76e-18;58!CL:0000215;6.76e-18;58!CL:1000413;1.02e-14;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.27e-70,24;CL:0005020,8.76e-59,6;CL:0002138,8.76e-59,6;CL:0005022,8.76e-59,6;CL:0000115,2.68e-46,36;CL:0002078,7.39e-37,45;CL:0002545,5.25e-29,2;CL:0000213,2.22e-28,58;CL:0000215,2.22e-28,58;CL:0000071,5.04e-28,18;CL:0002546,5.04e-28,18;CL:0002544,1.27e-21,6;CL:0002144,4.43e-20,3;CL:1000413,1.21e-14,9;CL:0000222,4.90e-13,121;CL:0000076,7.77e-08,63 | |||
|ontology_enrichment_development_v019=CL:0005022;9.84e-59;6!CL:0002546;5.66e-28;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.28e-21!18;UBERON:0004638!1.28e-21!18;UBERON:0004852!1.28e-21!18;UBERON:0000487!3.19e-17!22;UBERON:0002465!1.09e-16!10;UBERON:0001473!8.75e-16!8;UBERON:0004536!8.75e-16!8;UBERON:0006558!8.75e-16!8;UBERON:0006914!7.49e-15!25;UBERON:0000055!1.07e-13!69;UBERON:0001915!2.16e-11!3;UBERON:0001982!2.16e-11!3;UBERON:0002049!2.37e-11!79;UBERON:0007798!2.37e-11!79;UBERON:0004535!8.22e-11!110;UBERON:0001009!2.25e-10!113;UBERON:0005800!2.84e-08!2;UBERON:0001515!2.84e-08!2;UBERON:0001981!5.64e-07!60;UBERON:0007500!5.64e-07!60;UBERON:0004537!5.64e-07!60;UBERON:0006965!5.64e-07!60;UBERON:0002066!7.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.02e-44;8!UBERON:0004536;4.02e-44;8!UBERON:0006558;4.02e-44;8!UBERON:0002465;2.41e-35;10!UBERON:0005800;4.54e-29;2!UBERON:0001515;4.54e-29;2!UBERON:0004638;5.66e-28;18!UBERON:0001986;5.66e-28;18!UBERON:0004852;5.66e-28;18!UBERON:0000487;7.25e-23;22!UBERON:0006914;4.19e-20;25!UBERON:0010523;5.11e-20;3!UBERON:0001915;5.11e-20;3!UBERON:0001982;5.11e-20;3!UBERON:0000055;3.87e-18;65!UBERON:0003915;1.02e-14;9!UBERON:0004700;1.02e-14;9!UBERON:0001917;1.02e-14;9!UBERON:0000490;2.89e-14;33!UBERON:0002405;3.74e-13;27!UBERON:0002049;4.42e-12;75!UBERON:0007798;4.42e-12;75!UBERON:0002193;1.47e-08;42!UBERON:0004535;4.32e-08;109!UBERON:0007500;8.35e-07;56!UBERON:0001981;8.35e-07;56!UBERON:0004537;8.35e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.69e-44,8;UBERON:0004536,3.69e-44,8;UBERON:0006558,3.69e-44,8;UBERON:0002465,2.25e-35,10;UBERON:0005800,5.25e-29,2;UBERON:0001515,5.25e-29,2;UBERON:0004638,5.04e-28,18;UBERON:0001986,5.04e-28,18;UBERON:0004852,5.04e-28,18;UBERON:0000055,4.65e-24,68;UBERON:0000487,6.59e-23,22;UBERON:0002049,7.69e-21,78;UBERON:0007798,7.69e-21,78;UBERON:0006914,3.85e-20,25;UBERON:0010523,4.43e-20,3;UBERON:0001915,4.43e-20,3;UBERON:0001982,4.43e-20,3;UBERON:0004535,1.53e-17,109;UBERON:0001009,4.88e-17,112;UBERON:0003915,1.21e-14,9;UBERON:0004700,1.21e-14,9;UBERON:0001917,1.21e-14,9;UBERON:0007500,2.18e-08,59;UBERON:0001981,2.18e-08,59;UBERON:0004537,2.18e-08,59;UBERON:0006965,2.18e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,1.13061588384802,0,0,0,1.55050055501597,1.77883131343355,1.00416183829401,0.402829317109147,3.04108842287405,1.70843440283719,1.47065232138347,1.62028389576352,1.96459402224975,0.44905874525234,0.563057402416611,0,0,0.916008719652036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,1.85194205030644,5.89787871927255,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.295930216910801,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,1.06606955203727,0,2.5116841023204,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:90856951..90856962,+ | |||
}} |
Latest revision as of 08:03, 30 July 2015
Short description: | p@chr4:90856951..90856962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:90856951..90856962, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.27e-70 | 24 |
lymphangioblast | 8.76e-59 | 6 |
endothelial cell of lymphatic vessel | 8.76e-59 | 6 |
vascular lymphangioblast | 8.76e-59 | 6 |
endothelial cell | 2.68e-46 | 36 |
meso-epithelial cell | 7.39e-37 | 45 |
thoracic aorta endothelial cell | 5.25e-29 | 2 |
lining cell | 2.22e-28 | 58 |
barrier cell | 2.22e-28 | 58 |
blood vessel endothelial cell | 5.04e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.04e-28 | 18 |
aortic endothelial cell | 1.27e-21 | 6 |
capillary endothelial cell | 4.43e-20 | 3 |
endothelial cell of artery | 1.21e-14 | 9 |
mesodermal cell | 4.90e-13 | 121 |
squamous epithelial cell | 7.77e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.69e-44 | 8 |
lymph vasculature | 3.69e-44 | 8 |
lymphatic part of lymphoid system | 3.69e-44 | 8 |
lymphoid system | 2.25e-35 | 10 |
segment of aorta | 5.25e-29 | 2 |
thoracic aorta | 5.25e-29 | 2 |
blood vessel endothelium | 5.04e-28 | 18 |
endothelium | 5.04e-28 | 18 |
cardiovascular system endothelium | 5.04e-28 | 18 |
vessel | 4.65e-24 | 68 |
simple squamous epithelium | 6.59e-23 | 22 |
vasculature | 7.69e-21 | 78 |
vascular system | 7.69e-21 | 78 |
squamous epithelium | 3.85e-20 | 25 |
microcirculatory vessel | 4.43e-20 | 3 |
endothelium of capillary | 4.43e-20 | 3 |
capillary | 4.43e-20 | 3 |
cardiovascular system | 1.53e-17 | 109 |
circulatory system | 4.88e-17 | 112 |
endothelial tube | 1.21e-14 | 9 |
arterial system endothelium | 1.21e-14 | 9 |
endothelium of artery | 1.21e-14 | 9 |
epithelial tube open at both ends | 2.18e-08 | 59 |
blood vessel | 2.18e-08 | 59 |
blood vasculature | 2.18e-08 | 59 |
vascular cord | 2.18e-08 | 59 |