FFCP PHASE1:Hg19::chr5:115910475..115910491,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57556 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10738 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2E6 | |||
|association_with_transcript=59bp_to_NM_020796,uc003krx.3,uc010jck.2_5end | |||
|cluster_id=chr5:115910475..115910491,- | |||
|coexpression_cluster_id=C2800 | |||
|description=CAGE_peak_3_at_SEMA6A_5end | |||
|id=chr5:115910475..115910491,- | |||
|ontology_enrichment_celltype=CL:0000148!3.77e-08!10;CL:0000541!3.77e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.77e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.80e-10,10;CL:0000541,2.80e-10,10;CL:0000047,8.08e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.49e-11;82!UBERON:0009117;9.06e-07;10!UBERON:0005564;9.06e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.18e-41!115;UBERON:0001017!6.89e-35!82;UBERON:0001049!2.17e-33!57;UBERON:0005068!2.17e-33!57;UBERON:0006241!2.17e-33!57;UBERON:0007135!2.17e-33!57;UBERON:0005743!8.80e-33!86;UBERON:0000073!1.98e-32!94;UBERON:0001016!1.98e-32!94;UBERON:0002616!1.05e-27!59;UBERON:0000955!5.19e-27!69;UBERON:0006238!5.19e-27!69;UBERON:0003080!2.26e-25!42;UBERON:0002346!2.55e-25!90;UBERON:0002780!8.37e-25!41;UBERON:0001890!8.37e-25!41;UBERON:0006240!8.37e-25!41;UBERON:0003075!4.09e-24!86;UBERON:0007284!4.09e-24!86;UBERON:0002020!3.85e-22!34;UBERON:0003528!3.85e-22!34;UBERON:0001893!5.73e-22!34;UBERON:0002791!1.99e-21!33;UBERON:0000924!8.67e-21!173;UBERON:0006601!8.67e-21!173;UBERON:0001869!1.93e-20!32;UBERON:0004121!1.14e-19!169;UBERON:0003056!1.69e-17!61;UBERON:0000153!3.74e-17!129;UBERON:0007811!3.74e-17!129;UBERON:0000033!1.02e-16!123;UBERON:0000956!3.17e-16!25;UBERON:0000203!3.17e-16!25;UBERON:0002619!3.52e-15!22;UBERON:0001950!6.17e-14!20;UBERON:0004111!2.65e-13!241;UBERON:0000025!2.27e-12!194;UBERON:0000477!4.05e-11!286;UBERON:0000481!2.82e-09!347;UBERON:0000483!3.77e-09!309;UBERON:0000119!3.91e-09!312;UBERON:0003076!4.51e-09!15;UBERON:0003057!4.51e-09!15;UBERON:0000468!9.79e-09!659;UBERON:0000922!1.14e-08!612;UBERON:0000064!1.58e-08!219;UBERON:0000062!8.53e-08!511;UBERON:0004732!1.16e-07!13;UBERON:0002308!2.19e-07!9;UBERON:0000125!2.19e-07!9;UBERON:0002420!5.24e-07!9;UBERON:0007245!5.24e-07!9;UBERON:0010009!5.24e-07!9;UBERON:0010011!5.24e-07!9;UBERON:0000454!5.24e-07!9;UBERON:0002298!6.66e-07!8;UBERON:0004733!6.89e-07!12;UBERON:0002028!6.89e-07!12;UBERON:0007277!6.89e-07!12;UBERON:0000480!9.08e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.44e-24;34!UBERON:0002020;1.44e-24;34!UBERON:0001893;2.07e-24;34!UBERON:0002791;2.13e-24;32!UBERON:0001869;3.63e-24;32!UBERON:0002780;1.35e-23;41!UBERON:0001890;1.35e-23;41!UBERON:0000073;1.19e-22;53!UBERON:0002616;1.19e-22;53!UBERON:0000956;6.03e-21;25!UBERON:0000203;6.03e-21;25!UBERON:0002619;1.40e-19;22!UBERON:0001950;6.33e-18;20!UBERON:0007023;5.75e-15;114!UBERON:0000955;1.24e-14;68!UBERON:0001017;2.35e-14;75!UBERON:0001016;1.35e-13;83!UBERON:0000922;2.63e-13;49!UBERON:0004732;5.79e-10;13!UBERON:0000125;2.69e-09;9!UBERON:0002308;2.69e-09;9!UBERON:0004733;6.17e-09;12!UBERON:0002028;6.17e-09;12!UBERON:0002420;9.33e-09;9!UBERON:0007245;9.33e-09;9!UBERON:0010009;9.33e-09;9!UBERON:0010011;9.33e-09;9!UBERON:0000454;9.33e-09;9!UBERON:0009663;2.16e-07;7!UBERON:0011216;5.92e-07;132!UBERON:0001871;6.46e-07;6!UBERON:0002298;6.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.63e-53,114;UBERON:0001049,1.59e-43,56;UBERON:0005068,1.59e-43,56;UBERON:0006241,1.59e-43,56;UBERON:0007135,1.59e-43,56;UBERON:0001017,5.25e-41,81;UBERON:0000073,2.20e-40,53;UBERON:0002616,2.20e-40,53;UBERON:0001016,1.89e-39,89;UBERON:0002780,1.28e-32,41;UBERON:0001890,1.28e-32,41;UBERON:0003080,1.28e-32,41;UBERON:0006240,1.28e-32,41;UBERON:0003075,5.90e-32,82;UBERON:0007284,5.90e-32,82;UBERON:0002346,9.34e-32,86;UBERON:0000955,7.74e-31,68;UBERON:0006238,7.74e-31,68;UBERON:0011216,6.01e-29,223;UBERON:0003528,8.38e-29,34;UBERON:0002020,8.38e-29,34;UBERON:0001893,1.42e-28,34;UBERON:0002791,7.23e-27,32;UBERON:0001869,1.50e-26,32;UBERON:0010371,2.35e-25,104;UBERON:0004121,1.54e-22,171;UBERON:0000924,1.54e-22,171;UBERON:0006601,1.54e-22,171;UBERON:0003056,2.66e-22,61;UBERON:0000956,5.81e-21,25;UBERON:0000203,5.81e-21,25;UBERON:0002619,1.41e-19,22;UBERON:0001950,6.26e-18,20;UBERON:0010314,1.93e-17,132;UBERON:0000025,3.24e-12,192;UBERON:0003076,9.15e-12,15;UBERON:0003057,9.15e-12,15;UBERON:0004111,2.52e-11,240;UBERON:0004732,6.78e-10,13;UBERON:0000125,2.85e-09,9;UBERON:0002308,2.85e-09,9;UBERON:0004733,7.19e-09,12;UBERON:0002028,7.19e-09,12;UBERON:0007277,7.19e-09,12;UBERON:0002420,9.02e-09,9;UBERON:0007245,9.02e-09,9;UBERON:0010009,9.02e-09,9;UBERON:0010011,9.02e-09,9;UBERON:0000454,9.02e-09,9;UBERON:0000922,2.19e-07,592;UBERON:0009663,2.22e-07,7;UBERON:0001871,5.98e-07,6;UBERON:0002298,6.62e-07,6;UBERON:0000483,9.24e-07,306 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,1.35433163884467,0,3.44800193625897,2.57612388417951,4.51685602740518,3.51519390865448,4.35556412763322,3.11982239909794,4.88006844144811,0,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,2.26883561193763,1.10864698731282,0.527008714158756,4.12584087817795,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,1.29208379584664,1.77883131343355,2.00832367658802,0.805658634218294,0,2.19655851793353,0,0,0.535798369704479,1.57170560838319,0.563057402416611,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.933633106199299,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0.193260853163297,0.545492241181669,0,34.7625062469347,23.1927094562599,18.4748369162534,23.4273984334737,22.7088765788066,12.774207567654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0,1.47008711385542,1.26755034821831,0,5.31710916013264,0,11.8068901001389,0.171567810298526,0.219500570817251,0,0,0,0,0,0,3.70977295920246,0.352226082707465,0.433099343283221,0.462985512576611,0.951270761172991,0.790204397959275,0,0,0,0,0,1.00789276919316,0,0,0,0.383382679165211,33.9937634148201,3.52193736052904,0.621984346622316,0.144119953416961,0,14.0965325328615,11.8416411923066,23.4434894420094,10.2643467613623,3.80461723002297,17.1195542971033,18.292891688357,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6635570464688,11.712586847186,3.86644406388848,4.18790663335872,3.82763250991898,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,3.77457766191941,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,10.9982099128376,0.200506470303285,0,0,0,0,2.25599806453706,0.693138033939733,2.35304930753057,4.38417673959782,0.633309773357254,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,2.03901018436031,0.831076008928724,2.23874754722178,0,0,0,0,0,4.84292754744295,0.732555718546747,0.247528499761764,0,0.650060246036521,0,0.96670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0,0.145016693914229,0.340906509664404,4.27353771104339,0.495854746082934,0.192190067365106,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,5.83691564816031,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,3.55512733383367,0,0,0.851692475380653,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.748562161632879,3.66270448179735,0,0,0,0.23874448473769,0,0,6.95903353436409,9.98752856514641,0.111308705022906,0,0.211125408127993,2.19172787076177,3.86797481743607,0,0.20453736500431,0.369254416383208,0,0,0.537063524026827,0,2.26879832964947,0,0,10.6626602070474,9.74065030699438,15.9691038400955,0.520855522170466,0.0874599999961957,8.69999490521752,0,0,0.472775363535873,2.75794698593172,0.874813840149763,8.16037476186474,7.08593108651071,5.90922549264499,21.3614430843917,11.2790845129849,10.6397142823277,4.38770794307945,0,0,3.46276163267087,0,15.6783454983881,0.269272933229316,1.08647371922008,0.957003479195758,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,1.47698645169619,2.93819054686466,0.848118428603645,0.216388639742091,7.96209544862804,9.90724722437399,27.4963565220131,0,0.123563938946503,0.104421949505455,20.9617523569906,13.6438200040794,19.9124778866538,0,0,0,1.18375320854817,19.3585145677862,8.26396456402323,1.20054501294127,1.20258735531594,2.28114021073944,0,0,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0,0,1.57254001417827,0,0,0,0,1.93978032976839,0,3.61569185248852,0,0,7.34405233088193,0.586654148204409,0,7.47085481587734,0.799238438328521,0.144090417154106,0.343609788497747,50.6205243692795,0,0.248505071130865,0,0,0,0.305994652908965,0,52.2365651177517,23.6846305483148,0,0,0,2.23425921017803,3.43740636017525,5.0251111720377,1.39775300349294,2.57535628881943,1.11585728720936,3.8294579317434,0,45.433420315707,2.36349546921671,1.64831716762333,2.35912403489647,1.37798474120648,0,13.5189047267582,10.3514588644797,30.0608387629586,21.7312309823629,18.2793748732841,0,0,7.47219546893703,0,2.12775409707835,7.13382398635974,0.422401346077626,0.179287339332845,0,5.00286728461357,0.662091970365432,0,0,0,0,0,0,0,0,1.90517903781507,3.97520666736664,28.3129674431796,13.0910275725263,0.171086837884329,0,4.91222097811396,8.646236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| |||
|short_description=p3@SEMA6A | |||
}} |
Latest revision as of 20:49, 19 September 2015
Short description: | p3@SEMA6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEMA6A_5end |
Coexpression cluster: | C2800_pineal_teratocarcinoma_hepatoblastoma_optic_testicular_spinal_H9 |
Association with transcript: | 59bp_to_NM_020796, uc003krx.3, uc010jck.2_5end |
EntrezGene: | SEMA6A |
HGNC: | 10738 |
UniProt: | Q9H2E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.80e-10 | 10 |
melanoblast | 2.80e-10 | 10 |
neuronal stem cell | 8.08e-08 | 8 |