Personal tools

FFCP PHASE1:Mm9::chr16:58523727..58523737,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=54613|HGNC=|UniProt=|association_with_transcript=-61bp_to_ENSMUST00000149197_5end|description=CAGE_peak_11_at_St3gal6_5end|id=chr16:58523727..58523737,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.94e-12,9;CL:0002251,4.94e-12,9;CL:0000239,2.92e-09,6;CL:0000677,2.92e-09,6;CL:0000584,2.92e-09,6;CL:0000075,9.28e-08,7;CL:0000066,8.62e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.69e-11!43;UBERON:0000344!1.75e-10!15;UBERON:0001242!2.83e-09!13;UBERON:0000060!2.83e-09!13;UBERON:0001262!2.83e-09!13;UBERON:0004786!2.83e-09!13;UBERON:0005409!3.53e-08!59;UBERON:0004923!9.76e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.11e-20,31;UBERON:0000344,1.07e-19,15;UBERON:0001242,3.08e-17,13;UBERON:0001262,3.08e-17,13;UBERON:0004786,3.08e-17,13;UBERON:0004923,1.13e-15,24;UBERON:0003350,4.94e-12,9;UBERON:0004808,4.94e-12,9;UBERON:0001277,4.94e-12,9;UBERON:0005409,1.27e-10,47;UBERON:0000485,2.04e-09,11;UBERON:0004119,6.52e-07,118;UBERON:0000925,6.52e-07,118;UBERON:0006595,6.52e-07,118|phase1_expression=0.480446541314382,3.48975407639361,1.81999695755814,3.93203474698879,3.50627010962443,2.18243053485457,2.80335168714631,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,2.71987118748791,2.06468352960453,3.44539178469012,2.15380998079537,2.58565479223067,3.80046838912748,2.01624103807945,2.43903561720835,0,0,0,2.02196133825892,1.49611180822643,1.42918549383658,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0,0,0,1.02903774414379,0.573066879877513,1.54701627683233,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,0.45839474333043,0,0.284743361598206,0.559198337475902,0.151452386666368,0,1.15945795480671,0,0,0,0.649776417447669,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.445326417194474,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0,1.48316980640624,0.578397427679647,0,0.647067399789637,0.220841518460394,0,0,0,0.41889341362691,2.04365644166873,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.611036183101898,0.248813941220186,0.252722758433675,0.420883711772948,0.520481771850815,0,0.540186389416048,0,0.408218994907967,0.384341160854549,0.468508622798644,0.517406741478031,0.862271971731369,1.13463648100692,0.703804496655795,1.53437012699302,1.11218899690239,0.696504333044333,0.823128545631774,0.995171334092466,0,0,0,1.03562886267751,0.938104239924385,0.540186184383045,1.42046841351126,0.983821158737019,0.617068451549513,1.16266972375204,1.07309360559848,0.700592054203017,0.658239399653922,0.32833492815819,0.324275238183423,0,0.439100230582101,0.671032093801859,0.210289948564127,0.205809224758569,3.63460661282178,2.90895623329899,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.667134131534611,1.90225626112559,1.89811624617805,2.79988223030818,0.754005626400808,2.58643413653496,3.11942539390592,0.898819408654221,2.16138049874694,1.59313018603494,2.27601481143698,1.94222471436539,2.25415471346161,1.62921062276251,0.969762435838129,2.66516115583211,1.13825766823663,0.442830443938806,1.255989822731,1.35736880313981,0.592905254174298,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0.923765950833023,1.70542270593436,0.814824882210129,0.848725428875941,0.704070744865506,1.17254380209271,1.42826184531608,2.14647012643579,1.7339865851681,1.99318220683897,1.11618338060241,0.983179888294428,1.20879487306127,2.02508682014116,0,0,0,0,0.80275294993896,1.28932855251423,0,1.76729649043061,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0.35613120733451,0.488660878060728,0.164970122972535,0,2.91336763385978,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,0,1.09060118843252,1.78248689192361,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,1.96205699362278,0.822745103010605,0.913394847343798,1.40803024838226,3.60114520468494,0,0.32977250588296,0.161464426695906,0.361877549568935,0,0.164140899745061,2.91480836629851,0.556275906031529,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.406638934253697,0.756037385752609,0.209088296014469,0.87345025498471,0.269728692769641,0.41326727862668,0.523511883968059,0.388844919875379,0,0,0.598066184175915,0,0.777804753376191,0.904118764344118,0.675824501963113,0.58678619322877,0.2604087696879,0.943734099831398,0,0.576060012515731,0.316011120628178,0.810900861160657,1.23253148597793,0.25984164595559,0,0.596044064343795,0,0,0.302899349844443,0.15241361331,0.504130925684203,0.584747284438515,0.481059208201647,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,0.19318959403219,1.12609485270709,0.36630324853453,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,1.28367683836726,1.26348605881899,0.25347929989024,0.377252682772152,0.561849044819294,1.15245274328765,0.804096565378586,0.476293691283074,1.15884325944855,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,0.887379030796687,0.715308569841963,0.726732083161643,0.752875043322645,0.846146078916765,0.548783918618318,0.789209134313529,1.22223702461276,0.561142271657738,0.474540072496697,0.886540341380071,0,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,1.07435527024149,1.72159498861959,0.882365676478062,0.463735671240843|short_description=p11@St3gal6}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54613
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-61bp_to_ENSMUST00000149197_5end
|cluster_id=chr16:58523727..58523737,-
|description=CAGE_peak_11_at_St3gal6_5end
|id=chr16:58523727..58523737,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,4.94e-12,9;CL:0002251,4.94e-12,9;CL:0000239,2.92e-09,6;CL:0000677,2.92e-09,6;CL:0000584,2.92e-09,6;CL:0000075,9.28e-08,7;CL:0000066,8.62e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!3.69e-11!43;UBERON:0000344!1.75e-10!15;UBERON:0001242!2.83e-09!13;UBERON:0000060!2.83e-09!13;UBERON:0001262!2.83e-09!13;UBERON:0004786!2.83e-09!13;UBERON:0005409!3.53e-08!59;UBERON:0004923!9.76e-08!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.11e-20,31;UBERON:0000344,1.07e-19,15;UBERON:0001242,3.08e-17,13;UBERON:0001262,3.08e-17,13;UBERON:0004786,3.08e-17,13;UBERON:0004923,1.13e-15,24;UBERON:0003350,4.94e-12,9;UBERON:0004808,4.94e-12,9;UBERON:0001277,4.94e-12,9;UBERON:0005409,1.27e-10,47;UBERON:0000485,2.04e-09,11;UBERON:0004119,6.52e-07,118;UBERON:0000925,6.52e-07,118;UBERON:0006595,6.52e-07,118
|phase1_expression=0.480446541314382,3.48975407639361,1.81999695755814,3.93203474698879,3.50627010962443,2.18243053485457,2.80335168714631,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,2.71987118748791,2.06468352960453,3.44539178469012,2.15380998079537,2.58565479223067,3.80046838912748,2.01624103807945,2.43903561720835,0,0,0,2.02196133825892,1.49611180822643,1.42918549383658,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0,0,0,1.02903774414379,0.573066879877513,1.54701627683233,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,0.45839474333043,0,0.284743361598206,0.559198337475902,0.151452386666368,0,1.15945795480671,0,0,0,0.649776417447669,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.445326417194474,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0,1.48316980640624,0.578397427679647,0,0.647067399789637,0.220841518460394,0,0,0,0.41889341362691,2.04365644166873,0,0,0,0.898743836428936,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.611036183101898,0.248813941220186,0.252722758433675,0.420883711772948,0.520481771850815,0,0.540186389416048,0,0.408218994907967,0.384341160854549,0.468508622798644,0.517406741478031,0.862271971731369,1.13463648100692,0.703804496655795,1.53437012699302,1.11218899690239,0.696504333044333,0.823128545631774,0.995171334092466,0,0,0,1.03562886267751,0.938104239924385,0.540186184383045,1.42046841351126,0.983821158737019,0.617068451549513,1.16266972375204,1.07309360559848,0.700592054203017,0.658239399653922,0.32833492815819,0.324275238183423,0,0.439100230582101,0.671032093801859,0.210289948564127,0.205809224758569,3.63460661282178,2.90895623329899,0.853153002140936,0.464473343720877,0.644337306610467,0.201683524623343,0.667134131534611,1.90225626112559,1.89811624617805,2.79988223030818,0.754005626400808,2.58643413653496,3.11942539390592,0.898819408654221,2.16138049874694,1.59313018603494,2.27601481143698,1.94222471436539,2.25415471346161,1.62921062276251,0.969762435838129,2.66516115583211,1.13825766823663,0.442830443938806,1.255989822731,1.35736880313981,0.592905254174298,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0.923765950833023,1.70542270593436,0.814824882210129,0.848725428875941,0.704070744865506,1.17254380209271,1.42826184531608,2.14647012643579,1.7339865851681,1.99318220683897,1.11618338060241,0.983179888294428,1.20879487306127,2.02508682014116,0,0,0,0,0.80275294993896,1.28932855251423,0,1.76729649043061,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.567760340833074,0.35613120733451,0.488660878060728,0.164970122972535,0,2.91336763385978,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,0,1.09060118843252,1.78248689192361,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,1.96205699362278,0.822745103010605,0.913394847343798,1.40803024838226,3.60114520468494,0,0.32977250588296,0.161464426695906,0.361877549568935,0,0.164140899745061,2.91480836629851,0.556275906031529,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.406638934253697,0.756037385752609,0.209088296014469,0.87345025498471,0.269728692769641,0.41326727862668,0.523511883968059,0.388844919875379,0,0,0.598066184175915,0,0.777804753376191,0.904118764344118,0.675824501963113,0.58678619322877,0.2604087696879,0.943734099831398,0,0.576060012515731,0.316011120628178,0.810900861160657,1.23253148597793,0.25984164595559,0,0.596044064343795,0,0,0.302899349844443,0.15241361331,0.504130925684203,0.584747284438515,0.481059208201647,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,0.19318959403219,1.12609485270709,0.36630324853453,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,1.28367683836726,1.26348605881899,0.25347929989024,0.377252682772152,0.561849044819294,1.15245274328765,0.804096565378586,0.476293691283074,1.15884325944855,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,0.887379030796687,0.715308569841963,0.726732083161643,0.752875043322645,0.846146078916765,0.548783918618318,0.789209134313529,1.22223702461276,0.561142271657738,0.474540072496697,0.886540341380071,0,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,1.07435527024149,1.72159498861959,0.882365676478062,0.463735671240843
|short_description=p11@St3gal6
}}

Latest revision as of 16:48, 25 September 2015

Short description:p11@St3gal6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_St3gal6_5end
Coexpression cluster:NA
Association with transcript: -61bp_to_ENSMUST00000149197_5end
EntrezGene:St3gal6
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data