FFCP PHASE1:Hg19::chr5:2752268..2752279,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SI9 | |||
|association_with_transcript=6bp_to_ENST00000334000,ENST00000397835,NM_178569,uc003jdc.2,uc011cmg.1,uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | |||
|cluster_id=chr5:2752268..2752279,+ | |||
|description=CAGE_peak_9_at_C5orf38_5end | |||
|id=chr5:2752268..2752279,+ | |||
|ontology_enrichment_celltype=CL:0002251!5.35e-14!21;CL:0002076!1.02e-11!43;CL:0000223!1.38e-08!59;CL:0000066!1.69e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002363;9.07e-18;2!CL:0000244;1.44e-09;4!CL:0000731;1.44e-09;4!CL:0002188;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.27e-17,2;CL:0000008,1.27e-17,2;CL:0000244,1.22e-09,4;CL:0000731,1.22e-09,4;CL:0002188,7.01e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000008;9.07e-18;2!UBERON:0008814;9.07e-18;2!UBERON:0010056;9.07e-18;2 | |||
|ontology_enrichment_disease=DOID:1749!5.81e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.85e-12;3!DOID:1749;1.72e-10;14!DOID:3908;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.85e-12,3;DOID:1749,1.72e-10,14;DOID:3908,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.43e-12!5;UBERON:0003343!1.16e-10!4;UBERON:0004785!1.16e-10!4;UBERON:0003102!1.48e-10!95;UBERON:0005631!5.52e-10!14;UBERON:0000158!5.52e-10!14;UBERON:0000161!2.08e-08!35;UBERON:0001004!3.39e-08!72;UBERON:0000165!3.90e-08!28;UBERON:0000930!3.90e-08!28;UBERON:0000166!7.51e-08!21;UBERON:0004923!4.89e-07!57;UBERON:0000344!8.73e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;9.07e-18;2!UBERON:0001777;9.07e-18;2!UBERON:0001723;2.59e-12;3!UBERON:0001033;2.59e-12;3!UBERON:0003343;1.44e-09;4!UBERON:0003891;1.44e-09;4!UBERON:0004785;1.44e-09;4!UBERON:0000964;1.44e-09;4!UBERON:0010409;1.44e-09;4!UBERON:0000365;6.55e-08;5!UBERON:0000974;8.48e-07;6!UBERON:0005910;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,1.27e-17,2;UBERON:0001777,1.27e-17,2;UBERON:0001723,2.59e-12,3;UBERON:0001033,2.59e-12,3;UBERON:0010056,2.59e-12,3;UBERON:0003343,1.44e-09,4;UBERON:0004785,1.44e-09,4;UBERON:0003891,1.70e-09,4;UBERON:0000964,1.70e-09,4;UBERON:0010409,1.70e-09,4;UBERON:0004348,1.70e-09,4;UBERON:0005427,1.70e-09,4;UBERON:0000365,5.73e-08,5;UBERON:0005910,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.890894042497916,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0.628303510868405,1.52106320690811,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0.537862017998534,3.83830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.11796972334774,0.550285795565037,1.5018336599544,0,0.690359926060101,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0.473314686579554,0,0,0,0,0,0,0,0.437062287854782,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@C5orf38 | |||
}} |
Latest revision as of 14:08, 17 September 2015
Short description: | p9@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C5orf38_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000334000, ENST00000397835, NM_178569, uc003jdc.2, uc011cmg.1, uc011cmh.1, uc011cmi.1, uc011cmj.1_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | Q86SI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.27e-17 | 2 |
migratory cranial neural crest cell | 1.27e-17 | 2 |
transitional epithelial cell | 1.22e-09 | 4 |
urothelial cell | 1.22e-09 | 4 |
glomerular endothelial cell | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 1.27e-17 | 2 |
substantia propria of cornea | 1.27e-17 | 2 |
tongue | 2.59e-12 | 3 |
gustatory system | 2.59e-12 | 3 |
future tongue | 2.59e-12 | 3 |
mucosa of oral region | 1.44e-09 | 4 |
respiratory system mucosa | 1.44e-09 | 4 |
stroma | 1.70e-09 | 4 |
cornea | 1.70e-09 | 4 |
eye surface | 1.70e-09 | 4 |
optic eminence | 1.70e-09 | 4 |
corneal primordium | 1.70e-09 | 4 |
urothelium | 5.73e-08 | 5 |
transitional epithelium | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.85e-12 | 3 |
squamous cell carcinoma | 1.72e-10 | 14 |
non-small cell lung carcinoma | 5.35e-08 | 5 |