FFCP PHASE1:Hg19::chrX:41554895..41554940,+: Difference between revisions
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|id=chrX:41554895..41554940,+
|short_description=p3@GPR34
|description=CAGE_peak_3_at_GPR34_5end
|association_with_transcript=8bp_to_AB464544,CU676634,DQ893098,DQ89...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2857 | |EntrezGene=2857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4490 | |HGNC=4490 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_AB464544,CU676634,DQ893098,DQ896370_5end | |||
|cluster_id=chrX:41554895..41554940,+ | |||
|description=CAGE_peak_3_at_GPR34_5end | |||
|id=chrX:41554895..41554940,+ | |||
|ontology_enrichment_celltype=CL:0000839!8.64e-09!70;CL:0000557!1.38e-08!71;CL:0000766!1.59e-08!76;CL:0002619!9.72e-08!3;CL:0002274!3.30e-07!5;CL:0000457!3.30e-07!5;CL:0002191!3.30e-07!5;CL:0000097!3.30e-07!5;CL:0000831!3.30e-07!5;CL:0002028!3.30e-07!5;CL:0000235!6.56e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.49e-40;3!CL:0000235;9.85e-21;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.31e-40,3;CL:0000235,1.09e-20,6;CL:0000839,2.85e-09,66;CL:0000557,3.98e-09,67;CL:0000766,1.84e-08,72;CL:0002194,9.92e-08,59;CL:0000576,9.92e-08,59;CL:0000040,9.92e-08,59;CL:0000559,9.92e-08,59;CL:0002009,1.81e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-41!115;UBERON:0001049!3.94e-24!57;UBERON:0005068!3.94e-24!57;UBERON:0006241!3.94e-24!57;UBERON:0007135!3.94e-24!57;UBERON:0001017!5.49e-20!82;UBERON:0005743!1.33e-18!86;UBERON:0002616!8.90e-18!59;UBERON:0000955!2.37e-16!69;UBERON:0006238!2.37e-16!69;UBERON:0003080!2.59e-16!42;UBERON:0000073!6.40e-16!94;UBERON:0001016!6.40e-16!94;UBERON:0003075!2.91e-15!86;UBERON:0007284!2.91e-15!86;UBERON:0002780!4.81e-15!41;UBERON:0001890!4.81e-15!41;UBERON:0006240!4.81e-15!41;UBERON:0002346!3.48e-14!90;UBERON:0001893!1.36e-13!34;UBERON:0002791!1.25e-12!33;UBERON:0002020!2.85e-12!34;UBERON:0003528!2.85e-12!34;UBERON:0001869!2.30e-11!32;UBERON:0002619!3.41e-10!22;UBERON:0001950!1.45e-09!20;UBERON:0003056!1.86e-09!61;UBERON:0003076!3.45e-09!15;UBERON:0003057!3.45e-09!15;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0002298!1.46e-08!8;UBERON:0002390!4.16e-08!102;UBERON:0003061!4.16e-08!102;UBERON:0000153!7.86e-08!129;UBERON:0007811!7.86e-08!129;UBERON:0002193!1.57e-07!112;UBERON:0000062!1.62e-07!511;UBERON:0000033!3.07e-07!123;UBERON:0002240!3.19e-07!3;UBERON:0002371!5.41e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.07e-14;1!UBERON:0002171;2.10e-14;1!UBERON:0006518;2.10e-14;1!UBERON:0008949;2.10e-14;1!UBERON:0000101;2.10e-14;1!UBERON:0002167;2.10e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.36e-15,1;UBERON:0002171,1.61e-14,1;UBERON:0006518,1.61e-14,1;UBERON:0008949,1.61e-14,1;UBERON:0000101,1.61e-14,1;UBERON:0002167,1.61e-14,1;UBERON:0002405,2.31e-08,93;UBERON:0002371,5.45e-08,76;UBERON:0001474,2.28e-07,82;UBERON:0002193,4.26e-07,108 | |||
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| ||
|short_description=p3@GPR34 | |||
}} | }} |
Latest revision as of 02:22, 25 September 2015
Short description: | p3@GPR34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR34_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_AB464544, CU676634, DQ893098, DQ896370_5end |
EntrezGene: | GPR34 |
HGNC: | 4490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.31e-40 | 3 |
macrophage | 1.09e-20 | 6 |
myeloid lineage restricted progenitor cell | 2.85e-09 | 66 |
granulocyte monocyte progenitor cell | 3.98e-09 | 67 |
myeloid leukocyte | 1.84e-08 | 72 |
monopoietic cell | 9.92e-08 | 59 |
monocyte | 9.92e-08 | 59 |
monoblast | 9.92e-08 | 59 |
promonocyte | 9.92e-08 | 59 |
macrophage dendritic cell progenitor | 1.81e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.36e-15 | 1 |
lower lobe of right lung | 1.61e-14 | 1 |
right lung lobe | 1.61e-14 | 1 |
lower lobe of lung | 1.61e-14 | 1 |
lobe of lung | 1.61e-14 | 1 |
right lung | 1.61e-14 | 1 |
immune system | 2.31e-08 | 93 |
bone marrow | 5.45e-08 | 76 |
bone element | 2.28e-07 | 82 |
hemolymphoid system | 4.26e-07 | 108 |