FFCP PHASE1:Mm9::chr18:77700930..77700932,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2776|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:77700930..77700932,-|id=chr18:77700930..77700932,-|ontology_enrichment_celltype=CL:0000117!4.28e-12!23;CL:0000337!4.28e-12!23;CL:0002609!1.38e-09!6;CL:0002613!7.10e-09!3;CL:0000540!3.04e-08!33;CL:0000047!3.04e-08!33;CL:0000031!3.04e-08!33;CL:0000404!3.04e-08!33;CL:0000221!8.66e-08!44;CL:0000133!8.66e-08!44;CL:0000710!5.53e-07!1;CL:0002077!5.53e-07!1;CL:0005014!5.53e-07!1;CL:0002315!5.53e-07!1;CL:0002490!5.53e-07!1;CL:0000393!7.09e-07!39;CL:0000211!7.09e-07!39|ontology_enrichment_celltype_v019_2=CL:0002608,5.61e-30,3;CL:0002609,8.02e-16,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!2.07e-12!29;UBERON:0003528!2.07e-12!29;UBERON:0001893!2.07e-12!29;UBERON:0002780!1.87e-11!39;UBERON:0001890!1.87e-11!39;UBERON:0006240!1.87e-11!39;UBERON:0003080!3.84e-11!40;UBERON:0003056!5.19e-11!49;UBERON:0002020!1.83e-10!34;UBERON:0000033!4.31e-10!63;UBERON:0002616!6.69e-09!49;UBERON:0002346!8.88e-09!71;UBERON:0003075!8.88e-09!71;UBERON:0007284!8.88e-09!71;UBERON:0000955!1.06e-08!50;UBERON:0006238!1.06e-08!50;UBERON:0001049!2.52e-08!52;UBERON:0005068!2.52e-08!52;UBERON:0006241!2.52e-08!52;UBERON:0007135!2.52e-08!52;UBERON:0004121!3.06e-08!102;UBERON:0000924!3.06e-08!102;UBERON:0006601!3.06e-08!102;UBERON:0002420!3.32e-07!8;UBERON:0007245!3.32e-07!8;UBERON:0010009!3.32e-07!8;UBERON:0010011!3.32e-07!8;UBERON:0000454!3.32e-07!8;UBERON:0000956!4.07e-07!21;UBERON:0001869!4.07e-07!21;UBERON:0000203!4.07e-07!21;UBERON:0007811!5.22e-07!86;UBERON:0001017!5.35e-07!73;UBERON:0005743!5.35e-07!73;UBERON:0000073!8.91e-07!75;UBERON:0001016!8.91e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0001954,8.67e-14,7;UBERON:0003022,8.67e-14,7;UBERON:0002421,8.67e-14,7;UBERON:0000349,8.67e-14,7;UBERON:0002600,8.67e-14,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0,1.72521847832825,0,0,0,0,0.131886287730194,0.914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr18:77700930..77700932,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2776 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:77700930..77700932,- | |||
|description=CAGE_peak_at_chr18:77700930..77700932,- | |||
|id=chr18:77700930..77700932,- | |||
|ontology_enrichment_celltype=CL:0000117!4.28e-12!23;CL:0000337!4.28e-12!23;CL:0002609!1.38e-09!6;CL:0002613!7.10e-09!3;CL:0000540!3.04e-08!33;CL:0000047!3.04e-08!33;CL:0000031!3.04e-08!33;CL:0000404!3.04e-08!33;CL:0000221!8.66e-08!44;CL:0000133!8.66e-08!44;CL:0000710!5.53e-07!1;CL:0002077!5.53e-07!1;CL:0005014!5.53e-07!1;CL:0002315!5.53e-07!1;CL:0002490!5.53e-07!1;CL:0000393!7.09e-07!39;CL:0000211!7.09e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,5.61e-30,3;CL:0002609,8.02e-16,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!2.07e-12!29;UBERON:0003528!2.07e-12!29;UBERON:0001893!2.07e-12!29;UBERON:0002780!1.87e-11!39;UBERON:0001890!1.87e-11!39;UBERON:0006240!1.87e-11!39;UBERON:0003080!3.84e-11!40;UBERON:0003056!5.19e-11!49;UBERON:0002020!1.83e-10!34;UBERON:0000033!4.31e-10!63;UBERON:0002616!6.69e-09!49;UBERON:0002346!8.88e-09!71;UBERON:0003075!8.88e-09!71;UBERON:0007284!8.88e-09!71;UBERON:0000955!1.06e-08!50;UBERON:0006238!1.06e-08!50;UBERON:0001049!2.52e-08!52;UBERON:0005068!2.52e-08!52;UBERON:0006241!2.52e-08!52;UBERON:0007135!2.52e-08!52;UBERON:0004121!3.06e-08!102;UBERON:0000924!3.06e-08!102;UBERON:0006601!3.06e-08!102;UBERON:0002420!3.32e-07!8;UBERON:0007245!3.32e-07!8;UBERON:0010009!3.32e-07!8;UBERON:0010011!3.32e-07!8;UBERON:0000454!3.32e-07!8;UBERON:0000956!4.07e-07!21;UBERON:0001869!4.07e-07!21;UBERON:0000203!4.07e-07!21;UBERON:0007811!5.22e-07!86;UBERON:0001017!5.35e-07!73;UBERON:0005743!5.35e-07!73;UBERON:0000073!8.91e-07!75;UBERON:0001016!8.91e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,8.67e-14,7;UBERON:0003022,8.67e-14,7;UBERON:0002421,8.67e-14,7;UBERON:0000349,8.67e-14,7;UBERON:0002600,8.67e-14,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0,0,0,1.72521847832825,0,0,0,0,0.131886287730194,0.914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr18:77700930..77700932,- | |||
}} |
Latest revision as of 03:45, 6 August 2015
Short description: | p@chr18:77700930..77700932, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:77700930..77700932, - |
Coexpression cluster: | MCL_coexpression_mm9:2776 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 5.61e-30 | 3 |
neuron of cerebral cortex | 8.02e-16 | 6 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 8.67e-14 | 7 |
lobe parts of cerebral cortex | 8.67e-14 | 7 |
hippocampal formation | 8.67e-14 | 7 |
limbic system | 8.67e-14 | 7 |
limbic lobe | 8.67e-14 | 7 |