FFCP PHASE1:Mm9::chr19:36484120..36484152,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=76073|HGNC=|MCL_coexpression_id=17|UniProt=Q3UK78|association_with_transcript=-85bp_to_ENSMUST00000062389,uc008hhk.1_5end|description=CAGE_peak_9_at_Pcgf5_5end|id=chr19:36484120..36484152,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!1.58e-08!24;UBERON:0005156!7.73e-08!26;UBERON:0000990!7.73e-08!26;UBERON:0000991!1.17e-07!18;UBERON:0005564!1.17e-07!18;UBERON:0004176!3.13e-07!17;UBERON:0009196!3.13e-07!17;UBERON:0009117!3.13e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.11e-19,24;UBERON:0005156,1.03e-17,26;UBERON:0000990,1.03e-17,26;UBERON:0001987,1.14e-15,2;UBERON:0003124,1.14e-15,2;UBERON:0004340,1.14e-15,2;UBERON:0004176,1.34e-15,17;UBERON:0009196,1.34e-15,17;UBERON:0009117,1.34e-15,17;UBERON:0000991,1.01e-14,18;UBERON:0005564,1.01e-14,18;UBERON:0000473,1.59e-13,14;UBERON:0003135,1.27e-12,15;UBERON:0003101,7.76e-12,16;UBERON:0000079,7.76e-12,16;UBERON:0005631,9.09e-11,3;UBERON:0000478,9.09e-11,3;UBERON:0000158,9.09e-11,3;UBERON:0003134,9.16e-09,8;UBERON:0005795,2.67e-08,4;UBERON:0000995,2.67e-08,4;UBERON:0000474,7.51e-08,9;UBERON:0002323,4.97e-07,37;UBERON:0004458,4.97e-07,37;UBERON:0003886,7.76e-07,38;UBERON:0003975,8.29e-07,5|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.404950534779652,0,0,0,0.42438965179803,4.93251082876205,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.202753862439029,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.518448061542388,0,0,0.285650984403804,0,0,0,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0,0,0.142371680799103,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.91347103775248,0,0,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.988779870937496,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,1.07309360559848,1.05088808130453,1.15191894939436,0.656669856316381,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0.505157755894224,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0.491804836130026,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.283880170416537,1.06839362200353,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0.680879211507576,0,0.258717367565509,0.428674070063185,0.532020700926821,0,0,0.304464949114599,1.17335854031855,3.81297727554876,0,0,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,23.675103424736,0.299033092087958,0,0.777804753376191,0.387479470433193,0,0.469428954583016,1.69265700297135,3.14578033277133,23.4336597201226,18.7219504067613,0,0,0.102710957164827,0.649604114888975,0.358053391334963,0,0,0.590758108698309,0,0.0762068066549998,0.100826185136841,0.487289403698762,0.192423683280659,0.233753804363138,0,0.887943813496259,0.269141569828427,0.839423081820392,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0.581385666529314,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.249810577937946,0.701794825336225,0,0,0.220591419119515,0|short_description=p9@Pcgf5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76073 | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UK78 | |||
|association_with_transcript=-85bp_to_ENSMUST00000062389,uc008hhk.1_5end | |||
|cluster_id=chr19:36484120..36484152,+ | |||
|description=CAGE_peak_9_at_Pcgf5_5end | |||
|id=chr19:36484120..36484152,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.58e-08!24;UBERON:0005156!7.73e-08!26;UBERON:0000990!7.73e-08!26;UBERON:0000991!1.17e-07!18;UBERON:0005564!1.17e-07!18;UBERON:0004176!3.13e-07!17;UBERON:0009196!3.13e-07!17;UBERON:0009117!3.13e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.11e-19,24;UBERON:0005156,1.03e-17,26;UBERON:0000990,1.03e-17,26;UBERON:0001987,1.14e-15,2;UBERON:0003124,1.14e-15,2;UBERON:0004340,1.14e-15,2;UBERON:0004176,1.34e-15,17;UBERON:0009196,1.34e-15,17;UBERON:0009117,1.34e-15,17;UBERON:0000991,1.01e-14,18;UBERON:0005564,1.01e-14,18;UBERON:0000473,1.59e-13,14;UBERON:0003135,1.27e-12,15;UBERON:0003101,7.76e-12,16;UBERON:0000079,7.76e-12,16;UBERON:0005631,9.09e-11,3;UBERON:0000478,9.09e-11,3;UBERON:0000158,9.09e-11,3;UBERON:0003134,9.16e-09,8;UBERON:0005795,2.67e-08,4;UBERON:0000995,2.67e-08,4;UBERON:0000474,7.51e-08,9;UBERON:0002323,4.97e-07,37;UBERON:0004458,4.97e-07,37;UBERON:0003886,7.76e-07,38;UBERON:0003975,8.29e-07,5 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.404950534779652,0,0,0,0.42438965179803,4.93251082876205,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.202753862439029,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.518448061542388,0,0,0.285650984403804,0,0,0,0.919218786610021,0,0,0.307213066512487,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0,0,0.142371680799103,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.91347103775248,0,0,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.988779870937496,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,1.07309360559848,1.05088808130453,1.15191894939436,0.656669856316381,0.324275238183423,0,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0.505157755894224,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0.491804836130026,0.252470927204373,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.283880170416537,1.06839362200353,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0.680879211507576,0,0.258717367565509,0.428674070063185,0.532020700926821,0,0,0.304464949114599,1.17335854031855,3.81297727554876,0,0,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,23.675103424736,0.299033092087958,0,0.777804753376191,0.387479470433193,0,0.469428954583016,1.69265700297135,3.14578033277133,23.4336597201226,18.7219504067613,0,0,0.102710957164827,0.649604114888975,0.358053391334963,0,0,0.590758108698309,0,0.0762068066549998,0.100826185136841,0.487289403698762,0.192423683280659,0.233753804363138,0,0.887943813496259,0.269141569828427,0.839423081820392,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0.581385666529314,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0.249810577937946,0.701794825336225,0,0,0.220591419119515,0 | |||
|short_description=p9@Pcgf5 | |||
}} |
Latest revision as of 16:24, 25 September 2015
Short description: | p9@Pcgf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Pcgf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | -85bp_to_ENSMUST00000062389, uc008hhk.1_5end |
EntrezGene: | Pcgf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 3.11e-19 | 24 |
reproductive structure | 1.03e-17 | 26 |
reproductive system | 1.03e-17 | 26 |
placenta | 1.14e-15 | 2 |
chorion | 1.14e-15 | 2 |
allantois | 1.14e-15 | 2 |
external genitalia | 1.34e-15 | 17 |
indifferent external genitalia | 1.34e-15 | 17 |
indifferent gonad | 1.34e-15 | 17 |
gonad | 1.01e-14 | 18 |
gonad primordium | 1.01e-14 | 18 |
testis | 1.59e-13 | 14 |
male reproductive organ | 1.27e-12 | 15 |
male organism | 7.76e-12 | 16 |
male reproductive system | 7.76e-12 | 16 |
extraembryonic membrane | 9.09e-11 | 3 |
extraembryonic structure | 9.09e-11 | 3 |
membranous layer | 9.09e-11 | 3 |
female reproductive organ | 9.16e-09 | 8 |
embryonic uterus | 2.67e-08 | 4 |
uterus | 2.67e-08 | 4 |
female reproductive system | 7.51e-08 | 9 |
body cavity | 4.97e-07 | 37 |
body cavity or lining | 4.97e-07 | 37 |
body cavity precursor | 7.76e-07 | 38 |
internal female genitalia | 8.29e-07 | 5 |