FFCP PHASE1:Hg19::chrX:73041945..73041959,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:73041945..73041959,-
|short_description=p29@XIST
|description=CAGE_peak_29_at_XIST_5end
|association_with_transcript=101bp_to_X56197_5end
|EntrezGene=7503...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7503 | |EntrezGene=7503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=101bp_to_X56197_5end | |||
|cluster_id=chrX:73041945..73041959,- | |||
|coexpression_cluster_id=C639 | |||
|description=CAGE_peak_29_at_XIST_5end | |||
|id=chrX:73041945..73041959,- | |||
|ontology_enrichment_celltype=CL:0000990!4.51e-07!8;CL:0000451!7.22e-07!10 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.42e-09!34;UBERON:0003528!6.42e-09!34;UBERON:0001049!1.27e-08!57;UBERON:0005068!1.27e-08!57;UBERON:0006241!1.27e-08!57;UBERON:0007135!1.27e-08!57;UBERON:0002616!5.66e-08!59;UBERON:0001017!1.13e-07!82;UBERON:0002791!2.14e-07!33;UBERON:0001893!4.99e-07!34;UBERON:0002308!5.50e-07!9;UBERON:0000125!5.50e-07!9;UBERON:0003075!5.55e-07!86;UBERON:0007284!5.55e-07!86;UBERON:0005743!6.97e-07!86;UBERON:0002346!7.75e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.68e-07;1!UBERON:0002038;4.68e-07;1!UBERON:0001282;4.68e-07;1!UBERON:0009842;4.68e-07;1!UBERON:0003704;4.68e-07;1!UBERON:0009661;4.68e-07;1!UBERON:0002950;4.68e-07;1!UBERON:0001171;4.68e-07;1!UBERON:0001172;4.68e-07;1!UBERON:0001891;4.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.67e-07,1;UBERON:0009842,2.67e-07,1;UBERON:0003704,2.67e-07,1;UBERON:0001171,2.67e-07,1;UBERON:0001172,2.67e-07,1;UBERON:0007029,2.84e-07,1;UBERON:0002038,3.20e-07,1;UBERON:0009661,3.20e-07,1;UBERON:0002950,3.20e-07,1;UBERON:0001891,3.20e-07,1;UBERON:0009616,3.20e-07,1;UBERON:0010286,3.20e-07,1 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.382067028739756,0.0821005894499457,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.929716147622738,0.411167888021826,0,0,1.0246428261164,0,1.03423704220986,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0.651083453856419,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0.649094787309367,0.348259474598534,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,1.79389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0,0,0,0,0,0,0.61384789315225,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.577566499444116,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0,0,0.580066775656914,0.255679882248303,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0.562677665642051,0.333926115068718,0,0,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,0.552896299656123,0.591095237907095,0,0,0.557694977114413,0.461701551022782,1.48124672601102,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,2.44858209304392,0,1.35291077473043,4.45859223008163,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,1.75996244461323,0,0,0.19980960958213,0.864542502924636,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0.275078873194468,0.415440338029185,0.899895566206002,1.5476039091159,0,0.335434687599266,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0.129282956361551,1.05786081394152,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,1.10929051536852,0,0,0,0.151649117541648,0,0,0,1.59413131471908,0.149254802886874,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.53168342911599,0,0.601030435988874,0.761610424337591,1.22061219961398,0.909243296012797,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.389720617678777,0.265729680626726,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,1.2249819094128,0.0642292250964595,0,0.798169295285756,0,0,0,0.161475645631851,0,0,0,0,0.346576998451015,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0.620060389503552,0,4.37579847214576,0,0,0.527613733078862,0,0,0.672567444437648,0,0,0.177404740325278,0.460935950223117,0,0,0,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0.414432328326074,0.3414369541879,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,1.45713297917742,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,1.43339583151451,0,0,1.30905207102113,0,0,0,0,0.378499274505237,0,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0.724030971033267,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.684466602170562,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0.961705476909699 | |phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0,0.382067028739756,0.0821005894499457,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.929716147622738,0.411167888021826,0,0,1.0246428261164,0,1.03423704220986,0,0,0.376484679085209,0,0,0,0.641858054152187,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0.651083453856419,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0.649094787309367,0.348259474598534,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,1.79389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0,0,0,0,0,0,0.61384789315225,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.577566499444116,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0,0,0.580066775656914,0.255679882248303,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0.562677665642051,0.333926115068718,0,0,0.19924798825107,0,0.251932747854276,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.60298219312704,1.52581736317083,0.552896299656123,0.591095237907095,0,0,0.557694977114413,0.461701551022782,1.48124672601102,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,2.44858209304392,0,1.35291077473043,4.45859223008163,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,1.75996244461323,0,0,0.19980960958213,0.864542502924636,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0.275078873194468,0.415440338029185,0.899895566206002,1.5476039091159,0,0.335434687599266,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0.129282956361551,1.05786081394152,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,1.10929051536852,0,0,0,0.151649117541648,0,0,0,1.59413131471908,0.149254802886874,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.53168342911599,0,0.601030435988874,0.761610424337591,1.22061219961398,0.909243296012797,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0.389720617678777,0.265729680626726,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,1.2249819094128,0.0642292250964595,0,0.798169295285756,0,0,0,0.161475645631851,0,0,0,0,0.346576998451015,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0.620060389503552,0,4.37579847214576,0,0,0.527613733078862,0,0,0.672567444437648,0,0,0.177404740325278,0.460935950223117,0,0,0,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0.414432328326074,0.3414369541879,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,1.45713297917742,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0.0644578879735772,0,0,0.352894871715692,0,0,0,1.43339583151451,0,0,1.30905207102113,0,0,0,0,0.378499274505237,0,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0.724030971033267,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.684466602170562,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0.961705476909699 | ||
|short_description=p29@XIST | |||
}} | }} |
Latest revision as of 08:51, 16 September 2015
Short description: | p29@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 101bp_to_X56197_5end |
EntrezGene: | XIST |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.67e-07 | 1 |
acinus | 2.67e-07 | 1 |
intrahepatic bile duct | 2.67e-07 | 1 |
portal lobule | 2.67e-07 | 1 |
hepatic acinus | 2.67e-07 | 1 |
surface | 2.84e-07 | 1 |
substantia nigra | 3.20e-07 | 1 |
midbrain nucleus | 3.20e-07 | 1 |
regional part of midbrain | 3.20e-07 | 1 |
midbrain | 3.20e-07 | 1 |
presumptive midbrain | 3.20e-07 | 1 |
midbrain neural tube | 3.20e-07 | 1 |