FFCP PHASE1:Hg19::chrX:73041988..73042011,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:73041988..73042011,-
|short_description=p21@XIST
|description=CAGE_peak_21_at_XIST_5end
|association_with_transcript=49bp_to_X56197_5end
|EntrezGene=7503
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7503 | |EntrezGene=7503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_X56197_5end | |||
|cluster_id=chrX:73041988..73042011,- | |||
|coexpression_cluster_id=C639 | |||
|description=CAGE_peak_21_at_XIST_5end | |||
|id=chrX:73041988..73042011,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.57e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.28e-11!57;UBERON:0005068!5.28e-11!57;UBERON:0006241!5.28e-11!57;UBERON:0007135!5.28e-11!57;UBERON:0002020!2.01e-10!34;UBERON:0003528!2.01e-10!34;UBERON:0002780!3.40e-10!41;UBERON:0001890!3.40e-10!41;UBERON:0006240!3.40e-10!41;UBERON:0003080!9.08e-10!42;UBERON:0002791!1.96e-09!33;UBERON:0001893!5.70e-09!34;UBERON:0002616!1.39e-08!59;UBERON:0001869!6.39e-08!32;UBERON:0001017!2.04e-07!82;UBERON:0002346!2.91e-07!90;UBERON:0005743!3.42e-07!86;UBERON:0003075!5.98e-07!86;UBERON:0007284!5.98e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.36e-13;34!UBERON:0002020;4.36e-13;34!UBERON:0002791;2.42e-12;32!UBERON:0001893;3.75e-12;34!UBERON:0002780;5.83e-11;41!UBERON:0001890;5.83e-11;41!UBERON:0001869;6.42e-11;32!UBERON:0001950;1.52e-10;20!UBERON:0000073;2.47e-10;53!UBERON:0002616;2.47e-10;53!UBERON:0002420;2.60e-10;9!UBERON:0000125;2.60e-10;9!UBERON:0007245;2.60e-10;9!UBERON:0002308;2.60e-10;9!UBERON:0010009;2.60e-10;9!UBERON:0010011;2.60e-10;9!UBERON:0000454;2.60e-10;9!UBERON:0002619;1.64e-09;22!UBERON:0009663;8.11e-09;7!UBERON:0001873;1.57e-08;2!UBERON:0000956;2.90e-08;25!UBERON:0000203;2.90e-08;25!UBERON:0001872;1.25e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,9.95e-16,34;UBERON:0002020,9.95e-16,34;UBERON:0002791,2.19e-14,32;UBERON:0000073,2.28e-14,53;UBERON:0002616,2.28e-14,53;UBERON:0001049,2.04e-13,56;UBERON:0005068,2.04e-13,56;UBERON:0006241,2.04e-13,56;UBERON:0007135,2.04e-13,56;UBERON:0001893,2.05e-13,34;UBERON:0002780,8.78e-13,41;UBERON:0001890,8.78e-13,41;UBERON:0003080,8.78e-13,41;UBERON:0006240,8.78e-13,41;UBERON:0001869,5.14e-12,32;UBERON:0001950,8.17e-11,20;UBERON:0002420,2.06e-10,9;UBERON:0007245,2.06e-10,9;UBERON:0010009,2.06e-10,9;UBERON:0010011,2.06e-10,9;UBERON:0000454,2.06e-10,9;UBERON:0000955,3.02e-10,68;UBERON:0006238,3.02e-10,68;UBERON:0000125,3.86e-10,9;UBERON:0002308,3.86e-10,9;UBERON:0002619,9.35e-10,22;UBERON:0003075,2.69e-09,82;UBERON:0007284,2.69e-09,82;UBERON:0001017,2.75e-09,81;UBERON:0009663,8.53e-09,7;UBERON:0002346,1.07e-08,86;UBERON:0010371,1.11e-08,104;UBERON:0001873,1.64e-08,2;UBERON:0010122,1.64e-08,2;UBERON:0000956,1.78e-08,25;UBERON:0000203,1.78e-08,25;UBERON:0005253,2.59e-08,2;UBERON:0001016,5.16e-08,89;UBERON:0001872,7.97e-08,5;UBERON:0003056,9.34e-08,61 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0.382067028739756,0.164201178899891,0.236132343941038,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0.872389432677388,0.755751887377619,0,0.464858073811369,0.822335776043652,0,0.863077176966451,0.512321413058201,0,0.689491361473237,1.29096936716765,0,0.376484679085209,0.545812300115692,0,0.612167784741805,0.320929027076094,0,0.989553900560148,0.797854630486527,0,1.16083695451434,0,0,0.502497330513487,3.12889751052121,0,0.605399502633369,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,1.30216690771284,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.351339142772504,0.0654895377488563,0,0,1.9472843619281,0.174129737299267,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0,1.43418310374407,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,1.4351170855109,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.77236972004421,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.702012795417713,0,0,0.335964256397719,0,0.179117045405697,0,0,0,0.176096868026452,0.621984346622316,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0,0.716243852959582,0.448340575974109,0,0,0,0.508189248444927,0,0,1.34013012267479,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.767309866440312,0.561320188866147,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.512900250232778,0,0,0,0.366277859273374,1.40266149865,0,0,0,0.386682873168488,0.462145851343933,0.307007349452259,0,0,0.145016693914229,0.511359764496605,0.356128142586949,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,2.02979043692868,0,0.569647187174163,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0,0,0,0,0,0,1.68803299692615,0.667852230137435,0,0,0.19924798825107,0,1.25966373927138,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0.349839999984783,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,0,1.21637185924347,0,0,0,0.278847488557207,0.384751292518985,1.82307289355202,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,2.44858209304392,0.063186579628488,3.60776206594782,5.70285052684859,0,0,0.313932918407225,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.977756913674015,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0.825236619583403,0,0.449947783103001,1.5476039091159,0,1.0063040627978,0.0788057072991982,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0.653174720218818,0,0,3.57814845749386,0,0,0,0.517131825446202,1.05786081394152,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.732157589411779,0.1251909307065,1.14681839138014,0.887432412294818,0,0,0,0.303298235083296,0,0,0,1.59413131471908,0.447764408660622,0.701139929541673,0,0,0,0,0,0.302461847526478,0,0,0,0.899606224327209,0.465788870628778,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0,0.181848659202559,0.214821114084977,0,1.19428766609585,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0.584580926518165,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0,1.41696576325585,1.43670473151436,0,0,0.0691572524642179,1.13032951942296,0,0,0,0,0.462102664601353,0,0,0,0.150420656698515,0,0,0,0,0,0,1.56215619722769,1.44680757550829,0.0634158101939068,3.28184885410932,0,0,0.527613733078862,0,0,0.336283722218824,1.82089681270989,0,0.354809480650555,0.230467975111559,0.685952037749674,0,0,0,0,0,0.785577949580009,0,1.82631744101899,0,0,0,0,0,0,0,0.414432328326074,1.0243108625637,0,0,0,0,0,1.14553434272025,0.31020638566432,0,0,0,0.365753774946808,0,0.307988420568741,0,3.88568794447312,0.935757853848423,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0,0.8453114551668,0,0,0,0.199882311849858,0,0,0,2.19100916473955,0,1.43339583151451,0,0,2.18175345170189,0,0,0.462175628631418,0,0.504665699340316,0,0.380095503034311,0,0,0,0,0,0,0.829169439458779,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0.961705476909699 | |phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0.382067028739756,0.164201178899891,0.236132343941038,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.32389366601898,0,0.872389432677388,0.755751887377619,0,0.464858073811369,0.822335776043652,0,0.863077176966451,0.512321413058201,0,0.689491361473237,1.29096936716765,0,0.376484679085209,0.545812300115692,0,0.612167784741805,0.320929027076094,0,0.989553900560148,0.797854630486527,0,1.16083695451434,0,0,0.502497330513487,3.12889751052121,0,0.605399502633369,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,1.30216690771284,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.351339142772504,0.0654895377488563,0,0,1.9472843619281,0.174129737299267,0,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0,1.43418310374407,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,1.4351170855109,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.77236972004421,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.702012795417713,0,0,0.335964256397719,0,0.179117045405697,0,0,0,0.176096868026452,0.621984346622316,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0,0.716243852959582,0.448340575974109,0,0,0,0.508189248444927,0,0,1.34013012267479,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.767309866440312,0.561320188866147,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.512900250232778,0,0,0,0.366277859273374,1.40266149865,0,0,0,0.386682873168488,0.462145851343933,0.307007349452259,0,0,0.145016693914229,0.511359764496605,0.356128142586949,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,2.02979043692868,0,0.569647187174163,0,0,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0,0,0,0,0,0,1.68803299692615,0.667852230137435,0,0,0.19924798825107,0,1.25966373927138,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0.349839999984783,0,0,0,0,0,0,0,1.77148277162768,1.08536794762867,0,1.21637185924347,0,0,0,0.278847488557207,0.384751292518985,1.82307289355202,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,0,2.44858209304392,0.063186579628488,3.60776206594782,5.70285052684859,0,0,0.313932918407225,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.977756913674015,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0.825236619583403,0,0.449947783103001,1.5476039091159,0,1.0063040627978,0.0788057072991982,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0,0.653174720218818,0,0,3.57814845749386,0,0,0,0.517131825446202,1.05786081394152,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.732157589411779,0.1251909307065,1.14681839138014,0.887432412294818,0,0,0,0.303298235083296,0,0,0,1.59413131471908,0.447764408660622,0.701139929541673,0,0,0,0,0,0.302461847526478,0,0,0,0.899606224327209,0.465788870628778,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0,0.181848659202559,0.214821114084977,0,1.19428766609585,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0.584580926518165,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0.318004350653419,0,0,1.41070377476274,0,0,1.41696576325585,1.43670473151436,0,0,0.0691572524642179,1.13032951942296,0,0,0,0,0.462102664601353,0,0,0,0.150420656698515,0,0,0,0,0,0,1.56215619722769,1.44680757550829,0.0634158101939068,3.28184885410932,0,0,0.527613733078862,0,0,0.336283722218824,1.82089681270989,0,0.354809480650555,0.230467975111559,0.685952037749674,0,0,0,0,0,0.785577949580009,0,1.82631744101899,0,0,0,0,0,0,0,0.414432328326074,1.0243108625637,0,0,0,0,0,1.14553434272025,0.31020638566432,0,0,0,0.365753774946808,0,0.307988420568741,0,3.88568794447312,0.935757853848423,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0,0.8453114551668,0,0,0,0.199882311849858,0,0,0,2.19100916473955,0,1.43339583151451,0,0,2.18175345170189,0,0,0.462175628631418,0,0.504665699340316,0,0.380095503034311,0,0,0,0,0,0,0.829169439458779,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0.961705476909699 | ||
|short_description=p21@XIST | |||
}} | }} |
Latest revision as of 08:52, 16 September 2015
Short description: | p21@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 49bp_to_X56197_5end |
EntrezGene: | XIST |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data