FFCP PHASE1:Mm9::chr1:187255795..187255808,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:187255795..187255808,+|id=chr1:187255795..187255808,+|ontology_enrichment_celltype=CL:0000239!6.02e-16!6;CL:0000677!6.02e-16!6;CL:0000212!6.02e-16!6;CL:0000584!6.02e-16!6;CL:0002563!7.48e-14!9;CL:0002251!7.48e-14!9;CL:0000075!1.42e-13!7;CL:0000066!5.86e-09!25;CL:0000473!9.89e-09!3;CL:0000627!9.89e-09!3;CL:0000682!9.89e-09!3;CL:0002076!6.44e-08!15|ontology_enrichment_celltype_v019_2=CL:0000682,2.13e-11,3;CL:0000239,1.29e-10,6;CL:0000677,1.29e-10,6;CL:0000584,1.29e-10,6;CL:0000075,4.13e-09,7;CL:0002563,4.25e-07,9;CL:0002251,4.25e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.89e-29!43;UBERON:0000344!5.30e-28!15;UBERON:0001242!2.24e-23!13;UBERON:0000060!2.24e-23!13;UBERON:0001262!2.24e-23!13;UBERON:0004786!2.24e-23!13;UBERON:0005409!4.80e-22!59;UBERON:0004923!1.92e-16!24;UBERON:0003350!7.48e-14!9;UBERON:0004808!7.48e-14!9;UBERON:0001277!7.48e-14!9;UBERON:0000485!3.73e-11!11;UBERON:0001007!4.70e-10!128;UBERON:0001555!4.70e-10!128;UBERON:0007026!4.70e-10!128;UBERON:0004119!8.24e-10!130;UBERON:0000925!8.24e-10!130;UBERON:0006595!8.24e-10!130;UBERON:0000331!1.19e-08!3;UBERON:0002116!1.19e-08!3;UBERON:0001204!1.19e-08!3;UBERON:0001168!1.19e-08!3;UBERON:0004921!2.44e-08!126;UBERON:0004185!2.44e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.68e-36,31;UBERON:0005409,5.21e-26,47;UBERON:0000344,4.03e-19,15;UBERON:0001242,7.62e-14,13;UBERON:0001262,7.62e-14,13;UBERON:0004786,7.62e-14,13;UBERON:0004923,2.00e-11,24;UBERON:0001007,8.03e-11,116;UBERON:0001555,8.03e-11,116;UBERON:0007026,8.03e-11,116;UBERON:0004119,1.42e-10,118;UBERON:0000925,1.42e-10,118;UBERON:0006595,1.42e-10,118;UBERON:0002108,3.92e-09,4;UBERON:0004921,1.10e-08,114;UBERON:0001155,2.98e-08,2;UBERON:0000059,2.98e-08,2;UBERON:0001962,6.31e-08,2;UBERON:0001961,6.31e-08,2;UBERON:0001744,6.31e-08,2;UBERON:0003350,4.25e-07,9;UBERON:0004808,4.25e-07,9;UBERON:0001277,4.25e-07,9|phase1_expression=0,6.2815573375085,10.0099832665698,10.2837831844322,13.023288978605,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,5.16808767703518,3.87685796543167,1.939241094173,7.41091335879858,3.52842181663903,0.665191531965914,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.0575256436138,10.5780226665418,0,0,0,0,0,0,18.9811624617805,0.494096864172033,1.00534083520108,1.1937388322469,1.55971269695296,8.08937467788799,5.61958929674205,17.922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8655226681224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0879465334983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr1:187255795..187255808,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:187255795..187255808,+ | |||
|description=CAGE_peak_at_chr1:187255795..187255808,+ | |||
|id=chr1:187255795..187255808,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.02e-16!6;CL:0000677!6.02e-16!6;CL:0000212!6.02e-16!6;CL:0000584!6.02e-16!6;CL:0002563!7.48e-14!9;CL:0002251!7.48e-14!9;CL:0000075!1.42e-13!7;CL:0000066!5.86e-09!25;CL:0000473!9.89e-09!3;CL:0000627!9.89e-09!3;CL:0000682!9.89e-09!3;CL:0002076!6.44e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.13e-11,3;CL:0000239,1.29e-10,6;CL:0000677,1.29e-10,6;CL:0000584,1.29e-10,6;CL:0000075,4.13e-09,7;CL:0002563,4.25e-07,9;CL:0002251,4.25e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.89e-29!43;UBERON:0000344!5.30e-28!15;UBERON:0001242!2.24e-23!13;UBERON:0000060!2.24e-23!13;UBERON:0001262!2.24e-23!13;UBERON:0004786!2.24e-23!13;UBERON:0005409!4.80e-22!59;UBERON:0004923!1.92e-16!24;UBERON:0003350!7.48e-14!9;UBERON:0004808!7.48e-14!9;UBERON:0001277!7.48e-14!9;UBERON:0000485!3.73e-11!11;UBERON:0001007!4.70e-10!128;UBERON:0001555!4.70e-10!128;UBERON:0007026!4.70e-10!128;UBERON:0004119!8.24e-10!130;UBERON:0000925!8.24e-10!130;UBERON:0006595!8.24e-10!130;UBERON:0000331!1.19e-08!3;UBERON:0002116!1.19e-08!3;UBERON:0001204!1.19e-08!3;UBERON:0001168!1.19e-08!3;UBERON:0004921!2.44e-08!126;UBERON:0004185!2.44e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.68e-36,31;UBERON:0005409,5.21e-26,47;UBERON:0000344,4.03e-19,15;UBERON:0001242,7.62e-14,13;UBERON:0001262,7.62e-14,13;UBERON:0004786,7.62e-14,13;UBERON:0004923,2.00e-11,24;UBERON:0001007,8.03e-11,116;UBERON:0001555,8.03e-11,116;UBERON:0007026,8.03e-11,116;UBERON:0004119,1.42e-10,118;UBERON:0000925,1.42e-10,118;UBERON:0006595,1.42e-10,118;UBERON:0002108,3.92e-09,4;UBERON:0004921,1.10e-08,114;UBERON:0001155,2.98e-08,2;UBERON:0000059,2.98e-08,2;UBERON:0001962,6.31e-08,2;UBERON:0001961,6.31e-08,2;UBERON:0001744,6.31e-08,2;UBERON:0003350,4.25e-07,9;UBERON:0004808,4.25e-07,9;UBERON:0001277,4.25e-07,9 | |||
|phase1_expression=0,6.2815573375085,10.0099832665698,10.2837831844322,13.023288978605,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,5.16808767703518,3.87685796543167,1.939241094173,7.41091335879858,3.52842181663903,0.665191531965914,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,69.0575256436138,10.5780226665418,0,0,0,0,0,0,18.9811624617805,0.494096864172033,1.00534083520108,1.1937388322469,1.55971269695296,8.08937467788799,5.61958929674205,17.922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8655226681224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0879465334983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr1:187255795..187255808,+ | |||
}} |
Latest revision as of 11:01, 5 August 2015
Short description: | p@chr1:187255795..187255808, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:187255795..187255808, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.13e-11 | 3 |
brush border epithelial cell | 1.29e-10 | 6 |
gut absorptive cell | 1.29e-10 | 6 |
enterocyte | 1.29e-10 | 6 |
columnar/cuboidal epithelial cell | 4.13e-09 | 7 |
intestinal epithelial cell | 4.25e-07 | 9 |
epithelial cell of alimentary canal | 4.25e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.68e-36 | 31 |
gastrointestinal system | 5.21e-26 | 47 |
mucosa | 4.03e-19 | 15 |
intestinal mucosa | 7.62e-14 | 13 |
wall of intestine | 7.62e-14 | 13 |
gastrointestinal system mucosa | 7.62e-14 | 13 |
organ component layer | 2.00e-11 | 24 |
digestive system | 8.03e-11 | 116 |
digestive tract | 8.03e-11 | 116 |
primitive gut | 8.03e-11 | 116 |
endoderm-derived structure | 1.42e-10 | 118 |
endoderm | 1.42e-10 | 118 |
presumptive endoderm | 1.42e-10 | 118 |
small intestine | 3.92e-09 | 4 |
subdivision of digestive tract | 1.10e-08 | 114 |
colon | 2.98e-08 | 2 |
large intestine | 2.98e-08 | 2 |
gut-associated lymphoid tissue | 6.31e-08 | 2 |
mucosa-associated lymphoid tissue | 6.31e-08 | 2 |
lymphoid tissue | 6.31e-08 | 2 |
epithelium of mucosa | 4.25e-07 | 9 |
gastrointestinal system epithelium | 4.25e-07 | 9 |
intestinal epithelium | 4.25e-07 | 9 |