FFCP PHASE1:Hg19::chrX:9880496..9880550,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:9880496..9880550,+
|short_description=p2@SHROOM2
|description=CAGE_peak_2_at_SHROOM2_5end
|association_with_transcript=84bp_to_ENST00000418909,uc004csv.2,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=357 | |EntrezGene=357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |HGNC=630 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3B6 | |UniProt=F5H3B6 | ||
|association_with_transcript=84bp_to_ENST00000418909,uc004csv.2,uc011mic.1_5end | |||
|cluster_id=chrX:9880496..9880550,+ | |||
|description=CAGE_peak_2_at_SHROOM2_5end | |||
|id=chrX:9880496..9880550,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.66e-12!43;CL:0002159!1.95e-10!13;CL:0002368!1.43e-08!13;CL:0000223!3.38e-07!59;CL:0002251!6.29e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.27e-11;13!CL:0002076;4.88e-11;42!CL:0002159;2.14e-10;14!CL:0000244;4.81e-08;4!CL:0000731;4.81e-08;4!CL:0002251;7.93e-08;20!CL:0000240;7.03e-07;6!CL:0000311;7.03e-07;6!CL:0000079;7.03e-07;6!CL:0000237;7.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.00e-13,42;CL:0002368,4.85e-11,13;CL:0002159,2.19e-10,14;CL:0000223,5.23e-09,58;CL:0000244,4.50e-08,4;CL:0000731,4.50e-08,4;CL:0002251,9.57e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.39e-12;82!CL:0000357;7.03e-07;6!CL:0000114;7.03e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.59e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;6.47e-37;22!UBERON:0001869;7.56e-34;32!UBERON:0001950;8.33e-34;20!UBERON:0003528;8.38e-33;34!UBERON:0002020;8.38e-33;34!UBERON:0001893;1.25e-32;34!UBERON:0000956;9.01e-32;25!UBERON:0000203;9.01e-32;25!UBERON:0002791;2.26e-31;32!UBERON:0002780;2.54e-24;41!UBERON:0001890;2.54e-24;41!UBERON:0000073;3.51e-20;53!UBERON:0002616;3.51e-20;53!UBERON:0001017;5.45e-16;75!UBERON:0000955;2.09e-15;68!UBERON:0001016;5.16e-13;83!UBERON:0000200;4.09e-12;6!UBERON:0002021;1.58e-10;5!UBERON:0001872;2.16e-10;5!UBERON:0002298;1.46e-09;6!UBERON:0001871;1.73e-09;6!UBERON:0000365;1.78e-09;5!UBERON:0000349;9.53e-09;5!UBERON:0000486;2.35e-08;12!UBERON:0005910;8.50e-08;6!UBERON:0000125;1.09e-07;9!UBERON:0002308;1.09e-07;9!UBERON:0002420;1.15e-07;9!UBERON:0007245;1.15e-07;9!UBERON:0010009;1.15e-07;9!UBERON:0010011;1.15e-07;9!UBERON:0000454;1.15e-07;9!UBERON:0007196;1.24e-07;15!UBERON:0001558;1.24e-07;15!UBERON:0001870;6.52e-07;3!UBERON:0004121;8.95e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.73e-38,56;UBERON:0005068,3.73e-38,56;UBERON:0006241,3.73e-38,56;UBERON:0007135,3.73e-38,56;UBERON:0001869,4.69e-38,32;UBERON:0003528,6.80e-38,34;UBERON:0002020,6.80e-38,34;UBERON:0001893,7.42e-38,34;UBERON:0001017,1.67e-37,81;UBERON:0002619,6.45e-37,22;UBERON:0000073,2.82e-36,53;UBERON:0002616,2.82e-36,53;UBERON:0010371,6.44e-36,104;UBERON:0004121,8.51e-36,171;UBERON:0000924,8.51e-36,171;UBERON:0006601,8.51e-36,171;UBERON:0001016,1.66e-35,89;UBERON:0002791,4.44e-35,32;UBERON:0002780,2.35e-34,41;UBERON:0001890,2.35e-34,41;UBERON:0003080,2.35e-34,41;UBERON:0006240,2.35e-34,41;UBERON:0001950,8.15e-34,20;UBERON:0000955,8.48e-33,68;UBERON:0006238,8.48e-33,68;UBERON:0000956,8.99e-32,25;UBERON:0000203,8.99e-32,25;UBERON:0003075,9.61e-27,82;UBERON:0007284,9.61e-27,82;UBERON:0011216,8.73e-26,223;UBERON:0002346,6.56e-25,86;UBERON:0003056,7.04e-25,61;UBERON:0007023,2.53e-20,114;UBERON:0010314,2.32e-17,132;UBERON:0000200,4.61e-12,6;UBERON:0002050,9.25e-12,564;UBERON:0000923,6.86e-11,560;UBERON:0010316,6.86e-11,560;UBERON:0005291,6.86e-11,560;UBERON:0006598,6.86e-11,560;UBERON:0010317,6.86e-11,560;UBERON:0002532,6.86e-11,560;UBERON:0005423,1.27e-10,581;UBERON:0002021,1.67e-10,5;UBERON:0000922,1.97e-10,592;UBERON:0001872,2.09e-10,5;UBERON:0000483,6.41e-10,306;UBERON:0002298,1.11e-09,6;UBERON:0000119,1.17e-09,309;UBERON:0000365,1.47e-09,5;UBERON:0001871,1.58e-09,6;UBERON:0000349,7.69e-09,5;UBERON:0005910,7.28e-08,6;UBERON:0000125,7.63e-08,9;UBERON:0002308,7.63e-08,9;UBERON:0002420,8.69e-08,9;UBERON:0007245,8.69e-08,9;UBERON:0010009,8.69e-08,9;UBERON:0010011,8.69e-08,9;UBERON:0000454,8.69e-08,9;UBERON:0001004,9.18e-08,74;UBERON:0004111,1.00e-07,240;UBERON:0007196,1.28e-07,15;UBERON:0001558,1.28e-07,15;UBERON:0001870,6.99e-07,3 | |||
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| ||
|short_description=p2@SHROOM2 | |||
}} | }} |
Latest revision as of 15:39, 16 September 2015
Short description: | p2@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000418909, uc004csv.2, uc011mic.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | F5H3B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.00e-13 | 42 |
respiratory epithelial cell | 4.85e-11 | 13 |
general ecto-epithelial cell | 2.19e-10 | 14 |
endodermal cell | 5.23e-09 | 58 |
transitional epithelial cell | 4.50e-08 | 4 |
urothelial cell | 4.50e-08 | 4 |
epithelial cell of alimentary canal | 9.57e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.59e-08 | 14 |