FFCP PHASE1:Mm9::chr2:157383342..157383345,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:157383342..157383345,-|id=chr2:157383342..157383345,-|ontology_enrichment_celltype=CL:0000055!4.88e-14!50;CL:0000117!5.94e-14!23;CL:0000337!5.94e-14!23;CL:0000221!1.18e-13!44;CL:0000133!1.18e-13!44;CL:0002321!1.48e-13!70;CL:0000220!1.48e-13!70;CL:0002319!2.20e-13!43;CL:0000393!1.54e-12!39;CL:0000211!1.54e-12!39;CL:0000540!2.85e-11!33;CL:0000047!2.85e-11!33;CL:0000031!2.85e-11!33;CL:0000404!2.85e-11!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.53e-33,23;CL:0000337,5.53e-33,23;CL:0002319,1.22e-21,43;CL:0000540,1.48e-21,33;CL:0000047,1.48e-21,33;CL:0000031,1.48e-21,33;CL:0000404,1.48e-21,33;CL:0000221,5.01e-21,44;CL:0000133,5.01e-21,44;CL:0000393,1.86e-19,39;CL:0000211,1.86e-19,39;CL:0002321,8.09e-17,70;CL:0000723,6.05e-13,91;CL:0000048,6.05e-13,91;CL:0000034,9.47e-12,97;CL:0002613,4.54e-08,3;CL:0002612,5.06e-08,3;CL:0002614,6.61e-08,3;CL:0002610,1.88e-07,3;CL:0000120,6.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.92e-20!73;UBERON:0005743!1.92e-20!73;UBERON:0000073!2.82e-20!75;UBERON:0001016!2.82e-20!75;UBERON:0001049!6.37e-17!52;UBERON:0005068!6.37e-17!52;UBERON:0006241!6.37e-17!52;UBERON:0007135!6.37e-17!52;UBERON:0004121!4.87e-16!102;UBERON:0000924!4.87e-16!102;UBERON:0006601!4.87e-16!102;UBERON:0000955!2.94e-15!50;UBERON:0006238!2.94e-15!50;UBERON:0002616!4.47e-15!49;UBERON:0000033!4.95e-14!63;UBERON:0002020!3.36e-12!34;UBERON:0002346!9.92e-12!71;UBERON:0003075!9.92e-12!71;UBERON:0007284!9.92e-12!71;UBERON:0003080!2.07e-11!40;UBERON:0002780!4.01e-11!39;UBERON:0001890!4.01e-11!39;UBERON:0006240!4.01e-11!39;UBERON:0003056!2.37e-10!49;UBERON:0002791!5.08e-09!29;UBERON:0003528!5.08e-09!29;UBERON:0001893!5.08e-09!29;UBERON:0007811!4.01e-07!86;UBERON:0000153!6.45e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.14e-26,34;UBERON:0000073,1.50e-23,54;UBERON:0001017,2.67e-22,73;UBERON:0001016,1.60e-21,75;UBERON:0001049,1.23e-18,52;UBERON:0005068,1.23e-18,52;UBERON:0006241,1.23e-18,52;UBERON:0007135,1.23e-18,52;UBERON:0003528,5.64e-17,29;UBERON:0002791,5.64e-17,29;UBERON:0001893,5.64e-17,29;UBERON:0004121,1.56e-15,95;UBERON:0000924,1.56e-15,95;UBERON:0006601,1.56e-15,95;UBERON:0002346,4.22e-14,64;UBERON:0003075,4.22e-14,64;UBERON:0007284,4.22e-14,64;UBERON:0001948,2.47e-12,5;UBERON:0002315,2.47e-12,5;UBERON:0002616,3.77e-12,46;UBERON:0000955,8.41e-12,47;UBERON:0006238,8.41e-12,47;UBERON:0010371,1.10e-11,73;UBERON:0002780,1.19e-11,39;UBERON:0001890,1.19e-11,39;UBERON:0006240,1.19e-11,39;UBERON:0003080,2.88e-11,40;UBERON:0002420,1.41e-10,8;UBERON:0007245,1.41e-10,8;UBERON:0010009,1.41e-10,8;UBERON:0010011,1.41e-10,8;UBERON:0000454,1.41e-10,8;UBERON:0002240,3.31e-10,6;UBERON:0005174,3.31e-10,6;UBERON:0001137,3.31e-10,6;UBERON:0002021,3.53e-10,10;UBERON:0000411,3.53e-10,10;UBERON:0001950,3.53e-10,10;UBERON:0002619,4.76e-09,17;UBERON:0003076,6.65e-09,12;UBERON:0003057,6.65e-09,12;UBERON:0000956,7.04e-09,21;UBERON:0001869,7.04e-09,21;UBERON:0000203,7.04e-09,21;UBERON:0003056,1.59e-08,49;UBERON:0010314,3.64e-08,92;UBERON:0002257,5.06e-08,3;UBERON:0000025,5.76e-08,114;UBERON:0002038,6.61e-08,3;UBERON:0009663,6.61e-08,3;UBERON:0009661,6.61e-08,3;UBERON:0000125,6.61e-08,3;UBERON:0002308,6.61e-08,3;UBERON:0004684,1.88e-07,3;UBERON:0002275,1.88e-07,3;UBERON:0004111,4.66e-07,122|phase1_expression=0.160148847104794,0.697950815278722,0,1.20985684522732,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0.340173160604279,0.198581902401771,0,1.11994695955385,0.45881856213434,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0.498703936075477,0,0,0.7813353445238,0,0,0,0.485510353031154,0.629484089877886,0.608261587317087,1.10128051297009,1.56478268869608,0.65407546914134,0.219686182734472,1.36100929351998,0.55994568650145,0,0,0,0,0.514518872071894,0.573066879877513,0,1.01158230429799,1.5869729378161,1.26766280701236,0.677689064138264,0.889294796111139,1.3498495759221,0,4.2628806896766,0.898800331555214,3.07374644257244,0.725827286159344,2.70011876663381,0.841299845405528,1.99955689082663,1.76694832761291,0.489963196859816,1.24599112323707,0,1.10115880999389,1.78762273319263,1.68967186581868,1.45074916503213,2.56165402086747,3.64639359389732,2.79182999001381,1.68828783009504,1.5279824777681,1.76777151284201,3.70166370077668,1.4911955666024,0.227178579999552,0.0755715601067855,0,0,3.39985666853875,1.61910957491345,0,0.448026887097336,0,0.170430322578058,1.29893002301434,0,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.433798070759735,0,0,0,0,0,0.292780797011547,1.25668024088073,0,0.239630249011841,0,0.254140454146129,0.449371918214468,0,0.628271760564322,0,0,0.41557608911912,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.06803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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:157383342..157383345,- | |||
|description=CAGE_peak_at_chr2:157383342..157383345,- | |||
|id=chr2:157383342..157383345,- | |||
|ontology_enrichment_celltype=CL:0000055!4.88e-14!50;CL:0000117!5.94e-14!23;CL:0000337!5.94e-14!23;CL:0000221!1.18e-13!44;CL:0000133!1.18e-13!44;CL:0002321!1.48e-13!70;CL:0000220!1.48e-13!70;CL:0002319!2.20e-13!43;CL:0000393!1.54e-12!39;CL:0000211!1.54e-12!39;CL:0000540!2.85e-11!33;CL:0000047!2.85e-11!33;CL:0000031!2.85e-11!33;CL:0000404!2.85e-11!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.53e-33,23;CL:0000337,5.53e-33,23;CL:0002319,1.22e-21,43;CL:0000540,1.48e-21,33;CL:0000047,1.48e-21,33;CL:0000031,1.48e-21,33;CL:0000404,1.48e-21,33;CL:0000221,5.01e-21,44;CL:0000133,5.01e-21,44;CL:0000393,1.86e-19,39;CL:0000211,1.86e-19,39;CL:0002321,8.09e-17,70;CL:0000723,6.05e-13,91;CL:0000048,6.05e-13,91;CL:0000034,9.47e-12,97;CL:0002613,4.54e-08,3;CL:0002612,5.06e-08,3;CL:0002614,6.61e-08,3;CL:0002610,1.88e-07,3;CL:0000120,6.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-20!73;UBERON:0005743!1.92e-20!73;UBERON:0000073!2.82e-20!75;UBERON:0001016!2.82e-20!75;UBERON:0001049!6.37e-17!52;UBERON:0005068!6.37e-17!52;UBERON:0006241!6.37e-17!52;UBERON:0007135!6.37e-17!52;UBERON:0004121!4.87e-16!102;UBERON:0000924!4.87e-16!102;UBERON:0006601!4.87e-16!102;UBERON:0000955!2.94e-15!50;UBERON:0006238!2.94e-15!50;UBERON:0002616!4.47e-15!49;UBERON:0000033!4.95e-14!63;UBERON:0002020!3.36e-12!34;UBERON:0002346!9.92e-12!71;UBERON:0003075!9.92e-12!71;UBERON:0007284!9.92e-12!71;UBERON:0003080!2.07e-11!40;UBERON:0002780!4.01e-11!39;UBERON:0001890!4.01e-11!39;UBERON:0006240!4.01e-11!39;UBERON:0003056!2.37e-10!49;UBERON:0002791!5.08e-09!29;UBERON:0003528!5.08e-09!29;UBERON:0001893!5.08e-09!29;UBERON:0007811!4.01e-07!86;UBERON:0000153!6.45e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.14e-26,34;UBERON:0000073,1.50e-23,54;UBERON:0001017,2.67e-22,73;UBERON:0001016,1.60e-21,75;UBERON:0001049,1.23e-18,52;UBERON:0005068,1.23e-18,52;UBERON:0006241,1.23e-18,52;UBERON:0007135,1.23e-18,52;UBERON:0003528,5.64e-17,29;UBERON:0002791,5.64e-17,29;UBERON:0001893,5.64e-17,29;UBERON:0004121,1.56e-15,95;UBERON:0000924,1.56e-15,95;UBERON:0006601,1.56e-15,95;UBERON:0002346,4.22e-14,64;UBERON:0003075,4.22e-14,64;UBERON:0007284,4.22e-14,64;UBERON:0001948,2.47e-12,5;UBERON:0002315,2.47e-12,5;UBERON:0002616,3.77e-12,46;UBERON:0000955,8.41e-12,47;UBERON:0006238,8.41e-12,47;UBERON:0010371,1.10e-11,73;UBERON:0002780,1.19e-11,39;UBERON:0001890,1.19e-11,39;UBERON:0006240,1.19e-11,39;UBERON:0003080,2.88e-11,40;UBERON:0002420,1.41e-10,8;UBERON:0007245,1.41e-10,8;UBERON:0010009,1.41e-10,8;UBERON:0010011,1.41e-10,8;UBERON:0000454,1.41e-10,8;UBERON:0002240,3.31e-10,6;UBERON:0005174,3.31e-10,6;UBERON:0001137,3.31e-10,6;UBERON:0002021,3.53e-10,10;UBERON:0000411,3.53e-10,10;UBERON:0001950,3.53e-10,10;UBERON:0002619,4.76e-09,17;UBERON:0003076,6.65e-09,12;UBERON:0003057,6.65e-09,12;UBERON:0000956,7.04e-09,21;UBERON:0001869,7.04e-09,21;UBERON:0000203,7.04e-09,21;UBERON:0003056,1.59e-08,49;UBERON:0010314,3.64e-08,92;UBERON:0002257,5.06e-08,3;UBERON:0000025,5.76e-08,114;UBERON:0002038,6.61e-08,3;UBERON:0009663,6.61e-08,3;UBERON:0009661,6.61e-08,3;UBERON:0000125,6.61e-08,3;UBERON:0002308,6.61e-08,3;UBERON:0004684,1.88e-07,3;UBERON:0002275,1.88e-07,3;UBERON:0004111,4.66e-07,122 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,1.20985684522732,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,0.340173160604279,0.198581902401771,0,1.11994695955385,0.45881856213434,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0.498703936075477,0,0,0.7813353445238,0,0,0,0.485510353031154,0.629484089877886,0.608261587317087,1.10128051297009,1.56478268869608,0.65407546914134,0.219686182734472,1.36100929351998,0.55994568650145,0,0,0,0,0.514518872071894,0.573066879877513,0,1.01158230429799,1.5869729378161,1.26766280701236,0.677689064138264,0.889294796111139,1.3498495759221,0,4.2628806896766,0.898800331555214,3.07374644257244,0.725827286159344,2.70011876663381,0.841299845405528,1.99955689082663,1.76694832761291,0.489963196859816,1.24599112323707,0,1.10115880999389,1.78762273319263,1.68967186581868,1.45074916503213,2.56165402086747,3.64639359389732,2.79182999001381,1.68828783009504,1.5279824777681,1.76777151284201,3.70166370077668,1.4911955666024,0.227178579999552,0.0755715601067855,0,0,3.39985666853875,1.61910957491345,0,0.448026887097336,0,0.170430322578058,1.29893002301434,0,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.433798070759735,0,0,0,0,0,0.292780797011547,1.25668024088073,0,0.239630249011841,0,0.254140454146129,0.449371918214468,0,0.628271760564322,0,0,0.41557608911912,0.324482526135515,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.398068533636986,0.702213187313235,0,0,0,0,0,0.23674473558521,0,0,0.697601834251224,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.744281895337007,0,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0,0,4.52373851817817,0,0,0.275936746304732,0.160550589987792,0.468846746368813,0,0.252470927204373,0,0,0,0.477937595905104,0,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.567760340833074,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0,0,0.596861720015682,0,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0,0.358855426437903,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,1.54667864109319,2.05524755931193,1.5107877947794,0,1.35096360967266,1.35942722695261,1.55328093525546,0.31136204275253,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.565879024158229,0.187283014939765,0.320125762024346,0.0574354689556133,0.476293691283074,0,0,0,0.735994600671987,0,0.354951612318675,0,0,0,0.169229215783353,0,0,0.407412341537585,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr2:157383342..157383345,- | |||
}} |
Latest revision as of 09:53, 4 August 2015
Short description: | p@chr2:157383342..157383345, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157383342..157383345, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.53e-33 | 23 |
neuroblast (sensu Vertebrata) | 5.53e-33 | 23 |
neural cell | 1.22e-21 | 43 |
neuron | 1.48e-21 | 33 |
neuronal stem cell | 1.48e-21 | 33 |
neuroblast | 1.48e-21 | 33 |
electrically signaling cell | 1.48e-21 | 33 |
ectodermal cell | 5.01e-21 | 44 |
neurectodermal cell | 5.01e-21 | 44 |
electrically responsive cell | 1.86e-19 | 39 |
electrically active cell | 1.86e-19 | 39 |
embryonic cell | 8.09e-17 | 70 |
somatic stem cell | 6.05e-13 | 91 |
multi fate stem cell | 6.05e-13 | 91 |
stem cell | 9.47e-12 | 97 |
striatum neuron | 4.54e-08 | 3 |
neuron of the ventral spinal cord | 5.06e-08 | 3 |
neuron of the substantia nigra | 6.61e-08 | 3 |
raphe nuclei neuron | 1.88e-07 | 3 |
granule cell | 6.01e-07 | 3 |