FFCP PHASE1:Hg19::chr7:27153428..27153440,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5104 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z3A4 | |||
|association_with_transcript=23bp_to_ENST00000522456_5end | |||
|cluster_id=chr7:27153428..27153440,- | |||
|coexpression_cluster_id=C2890 | |||
|description=CAGE_peak_3_at_HOXA3_5end | |||
|id=chr7:27153428..27153440,- | |||
|ontology_enrichment_celltype=CL:0000066!1.33e-16!254;CL:0000076!7.89e-15!62;CL:0000222!3.25e-14!119;CL:1000449!4.13e-14!16;CL:1000497!4.18e-13!18;CL:0002518!4.18e-13!18;CL:1000507!2.77e-11!12;CL:1000494!2.77e-11!12;CL:0002681!3.94e-11!13;CL:0002584!3.94e-11!13;CL:0000213!1.68e-10!57;CL:0000215!1.68e-10!57;CL:0000220!7.39e-10!246;CL:0002321!1.45e-09!248;CL:0000077!2.59e-09!19;CL:0002078!9.77e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.63e-21;15!CL:1000507;3.04e-19;10!CL:1000494;3.04e-19;10!CL:1000497;4.44e-18;17!CL:0002518;4.44e-18;17!CL:0002681;2.05e-14;12!CL:0002584;2.05e-14;12!CL:0000077;7.92e-09;19!CL:1000746;3.34e-08;7!CL:1000612;3.34e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.43e-21,15;CL:1000507,1.82e-19,10;CL:1000494,1.82e-19,10;CL:1000497,3.13e-18,17;CL:0002518,3.13e-18,17;CL:0002681,1.49e-14,12;CL:0002584,1.49e-14,12;CL:0000066,9.46e-09,253;CL:0000077,9.53e-09,19;CL:1000746,3.29e-08,7;CL:1000612,3.29e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.25e-10!106;DOID:0050687!1.91e-09!143;DOID:1749!8.03e-08!14;DOID:162!9.86e-08!235;DOID:14566!2.29e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.01e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0005177!1.18e-19!107;UBERON:0002100!7.62e-17!216;UBERON:0000466!2.74e-16!126;UBERON:0003104!2.93e-16!238;UBERON:0009142!2.93e-16!238;UBERON:0000464!1.27e-15!104;UBERON:0003914!2.32e-15!118;UBERON:0003886!3.81e-15!63;UBERON:0009569!2.96e-14!113;UBERON:0004211!4.13e-14!16;UBERON:0001285!4.13e-14!16;UBERON:0007684!4.13e-14!16;UBERON:0003220!4.13e-14!16;UBERON:0004208!4.13e-14!16;UBERON:0003064!4.68e-13!37;UBERON:0005172!5.71e-13!55;UBERON:0005173!5.71e-13!55;UBERON:0002417!5.87e-13!61;UBERON:0000916!5.87e-13!61;UBERON:0006555!6.63e-13!17;UBERON:0005103!6.63e-13!17;UBERON:0000083!6.63e-13!17;UBERON:0009201!6.63e-13!17;UBERON:0004819!6.63e-13!17;UBERON:0006553!6.63e-13!17;UBERON:0003074!6.63e-13!17;UBERON:0003060!6.63e-13!17;UBERON:0001851!6.87e-13!16;UBERON:0000489!2.38e-12!32;UBERON:0002553!3.65e-12!70;UBERON:0002113!5.14e-12!27;UBERON:0003918!5.14e-12!27;UBERON:0005095!5.14e-12!27;UBERON:0007687!5.14e-12!27;UBERON:0000080!7.70e-12!18;UBERON:0002120!7.70e-12!18;UBERON:0004875!7.70e-12!18;UBERON:0005721!7.70e-12!18;UBERON:0005754!7.70e-12!18;UBERON:0007297!7.70e-12!18;UBERON:0003887!2.09e-11!21;UBERON:0001008!2.60e-11!45;UBERON:0009773!2.77e-11!12;UBERON:0001231!2.77e-11!12;UBERON:0004810!2.77e-11!12;UBERON:0001225!3.94e-11!13;UBERON:0008987!3.94e-11!13;UBERON:0006554!7.86e-11!44;UBERON:0005256!1.06e-10!143;UBERON:0000353!3.64e-10!17;UBERON:0000058!4.32e-10!26;UBERON:0004876!4.75e-10!20;UBERON:0000481!6.36e-10!347;UBERON:0000490!6.46e-10!138;UBERON:0000926!1.05e-09!448;UBERON:0004120!1.05e-09!448;UBERON:0006603!1.05e-09!448;UBERON:0004111!1.76e-09!241;UBERON:0000483!2.04e-09!309;UBERON:0000025!2.15e-09!194;UBERON:0004921!2.58e-09!129;UBERON:0004185!2.58e-09!129;UBERON:0000119!4.92e-09!312;UBERON:0001007!2.81e-08!155;UBERON:0001555!2.81e-08!155;UBERON:0007026!2.81e-08!155;UBERON:0000077!5.48e-08!130;UBERON:0000475!7.80e-08!365;UBERON:0004119!2.56e-07!169;UBERON:0000925!2.56e-07!169;UBERON:0006595!2.56e-07!169;UBERON:0001981!3.58e-07!60;UBERON:0007500!3.58e-07!60;UBERON:0004537!3.58e-07!60;UBERON:0006965!3.58e-07!60;UBERON:0000477!4.00e-07!286;UBERON:0003103!6.44e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.63e-21;15!UBERON:0004819;6.63e-21;15!UBERON:0001285;6.63e-21;15!UBERON:0007684;6.63e-21;15!UBERON:0004211;3.04e-19;10!UBERON:0009773;3.04e-19;10!UBERON:0001231;3.04e-19;10!UBERON:0004810;3.04e-19;10!UBERON:0001225;2.05e-14;12!UBERON:0008987;2.05e-14;12!UBERON:0002113;5.69e-14;24!UBERON:0011143;5.69e-14;24!UBERON:0001851;1.15e-13;15!UBERON:0000353;1.15e-13;15!UBERON:0000489;6.47e-13;29!UBERON:0006554;2.30e-12;30!UBERON:0001008;2.30e-12;30!UBERON:0000074;3.34e-08;7!UBERON:0001229;3.34e-08;7!UBERON:0005172;5.38e-08;52!UBERON:0005173;5.38e-08;52!UBERON:0005177;8.36e-08;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.43e-21,15;UBERON:0009773,4.43e-21,15;UBERON:0001231,4.43e-21,15;UBERON:0001285,4.43e-21,15;UBERON:0007684,4.43e-21,15;UBERON:0004208,4.43e-21,15;UBERON:0006555,1.45e-19,16;UBERON:0004819,1.45e-19,16;UBERON:0004810,1.82e-19,10;UBERON:0001225,1.49e-14,12;UBERON:0008987,1.49e-14,12;UBERON:0000353,8.60e-14,15;UBERON:0001851,1.13e-13,15;UBERON:0002113,1.02e-12,26;UBERON:0003918,1.02e-12,26;UBERON:0011143,1.02e-12,26;UBERON:0005095,1.02e-12,26;UBERON:0007687,1.02e-12,26;UBERON:0000489,6.31e-12,31;UBERON:0005177,1.51e-11,101;UBERON:0005172,1.12e-10,54;UBERON:0005173,1.12e-10,54;UBERON:0003914,5.90e-10,117;UBERON:0002417,3.93e-09,60;UBERON:0000916,3.93e-09,60;UBERON:0006554,5.54e-09,47;UBERON:0009569,6.68e-09,112;UBERON:0001008,1.03e-08,48;UBERON:0010532,3.29e-08,7;UBERON:0000074,3.29e-08,7;UBERON:0001229,3.29e-08,7;UBERON:0001230,3.29e-08,7;UBERON:0003220,3.29e-08,7;UBERON:0005749,3.29e-08,7;UBERON:0004199,3.29e-08,7;UBERON:0004209,3.29e-08,7;UBERON:0004198,3.29e-08,7;UBERON:0002100,4.54e-08,199;UBERON:0003104,1.37e-07,160;UBERON:0009142,1.37e-07,160;UBERON:0005103,3.96e-07,8;UBERON:0000083,3.96e-07,8;UBERON:0009201,3.96e-07,8;UBERON:0006553,3.96e-07,8;UBERON:0003074,3.96e-07,8;UBERON:0003060,3.96e-07,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,4.17747692052565,0.697801167972428,0.655324116390517,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,1.80808358407193,2.19093027116212,0,0.984968464614303,2.24400760368678,3.13454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.976248230192678,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,3.31583314765545,4.35766729300147,8.29775826811074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0.561320188866147,0.640695746278505,0,0.965123526861645,1.48418066444991,0.154209693802656,0.532685175939381,0.328508624055237,1.03850885836724,0.116210378459959,0.120859449591622,0.200506470303285,0.184161977871793,0.229628896329213,0,0.131124414959424,2.25599806453706,1.84836809050595,8.62784746094541,5.84556898613043,4.43316841350078,1.13733384070897,0.340187410553031,1.51141141271498,1.54227252690289,5.1479823133332,4.51520796469368,0.509752546090077,2.49322802678617,4.25362033972139,0,0,0,0,0,0,0,0,0,0,0,0.676695028044854,0.308097234229289,0.460511024178389,0.137836572484531,0,0,0.340906509664404,0.178064071293475,0,0,0,0,0,0.62962469366128,2.0911118104818,0,0,1.73986598415015,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,2.35484592059769,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,1.46290121726877,3.1682753652067,1.05650146756755,0,0.848432591722276,0,14.3354989321992,0,0,0.578775534266688,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,3.12549761487054,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,3.47713520507326,0,0,0.898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,7.83517479163909,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,2.15231080825299,0.485560759068186,0,0,0,0,0.60129367765797,1.24425829676697,0.664653872707185,1.65495977937749,0.941798755221676,1.19472429772959,4.26914319044689,0,0,1.07791637155815,0.957651272384428,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,0,0,0.19871461170299,0,0.391102765469606,5.05000567584662,0.213452994739353,0.799238438328521,1.00863292007874,8.81931790477551,1.37275998289572,0.288109595976299,2.60930324687408,0.235694034616795,0,0.104602846312333,1.22397861163586,9.2464188768486,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0.360299883542404,1.16495949527454,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.944182586429966,0,0.717149357331379,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,2.04465626142506,3.39936274560377,0,0,0.387848869084652,0,0.855434189421647,3.52407511158336,0,0.471612915298998,0.414239055347196,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0.573409195690071,0,0.434674820589684,0,1.8747061194316,3.33628058591625,0,2.82318983637806,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0.151230923763239,1.70980920641059,0.147855149989634,0.159296767163702,0,1.55262956876259,0.414706207840855,0.53168342911599,0,1.35231848097497,1.14241563650639,2.84809513243263,0,1.28892668450986,0,0,1.20008329398946,0,0,0,0.57785949122191,1.07220795687463,0.260994291965212,1.58694147858591,4.39892701215285,1.22368352253234,0.358177682162975,0.308801447160972,5.92066933862509,0.353378291891762,4.24410884196013,0,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,1.07962490351128,0.825788063434183,0.183428598521679,1.96393632455575,0,0.690359926060101,0.397832444232549,0.15042065669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| |||
|short_description=p3@HOXA3 | |||
}} |
Latest revision as of 01:01, 18 September 2015
Short description: | p3@HOXA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXA3_5end |
Coexpression cluster: | C2890_Smooth_glioma_clear_Renal_endometrial_mesothelioma_gastric |
Association with transcript: | 23bp_to_ENST00000522456_5end |
EntrezGene: | HOXA3 |
HGNC: | 5104 |
UniProt: | F2Z3A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.43e-21 | 15 |
kidney tubule cell | 1.82e-19 | 10 |
nephron tubule epithelial cell | 1.82e-19 | 10 |
kidney cell | 3.13e-18 | 17 |
kidney epithelial cell | 3.13e-18 | 17 |
kidney cortical cell | 1.49e-14 | 12 |
renal cortical epithelial cell | 1.49e-14 | 12 |
epithelial cell | 9.46e-09 | 253 |
mesothelial cell | 9.53e-09 | 19 |
glomerular cell | 3.29e-08 | 7 |
kidney corpuscule cell | 3.29e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.01e-07 | 235 |