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FFCP PHASE1:Mm9::chr3:153636455..153636484,+: Difference between revisions

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{{FFCP|EntrezGene=242259|HGNC=|MCL_coexpression_id=593|UniProt=Q5RJI2|association_with_transcript=55bp_to_ENSMUST00000089948,NM_001081263,uc008ruk.1_5end|description=CAGE_peak_2_at_Slc44a5_5end|id=chr3:153636455..153636484,+|ontology_enrichment_celltype=CL:0000540!2.92e-19!33;CL:0000047!2.92e-19!33;CL:0000031!2.92e-19!33;CL:0000404!2.92e-19!33;CL:0002319!4.16e-15!43;CL:0000221!2.24e-14!44;CL:0000133!2.24e-14!44;CL:0000393!8.29e-14!39;CL:0000211!8.29e-14!39;CL:0000117!1.53e-13!23;CL:0000337!1.53e-13!23;CL:0000055!1.06e-10!50;CL:0000107!4.71e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.97e-35,33;CL:0000047,1.97e-35,33;CL:0000031,1.97e-35,33;CL:0000404,1.97e-35,33;CL:0000393,9.36e-29,39;CL:0000211,9.36e-29,39;CL:0002319,1.99e-27,43;CL:0000221,1.28e-26,44;CL:0000133,1.28e-26,44;CL:0000117,7.14e-22,23;CL:0000337,7.14e-22,23;CL:0000107,3.04e-16,9;CL:0002321,8.80e-14,70;CL:0002609,4.65e-11,6;CL:0000723,4.77e-08,91;CL:0000048,4.77e-08,91;CL:0000034,3.97e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-21!73;UBERON:0005743!1.10e-21!73;UBERON:0000073!6.64e-21!75;UBERON:0001016!6.64e-21!75;UBERON:0004121!1.12e-18!102;UBERON:0000924!1.12e-18!102;UBERON:0006601!1.12e-18!102;UBERON:0002346!1.53e-16!71;UBERON:0003075!1.53e-16!71;UBERON:0007284!1.53e-16!71;UBERON:0003056!1.99e-14!49;UBERON:0001049!1.06e-12!52;UBERON:0005068!1.06e-12!52;UBERON:0006241!1.06e-12!52;UBERON:0007135!1.06e-12!52;UBERON:0002020!4.32e-12!34;UBERON:0003080!1.30e-11!40;UBERON:0002780!3.77e-11!39;UBERON:0001890!3.77e-11!39;UBERON:0006240!3.77e-11!39;UBERON:0000033!7.97e-11!63;UBERON:0000955!4.65e-10!50;UBERON:0006238!4.65e-10!50;UBERON:0002616!9.20e-10!49;UBERON:0002791!5.21e-09!29;UBERON:0003528!5.21e-09!29;UBERON:0001893!5.21e-09!29;UBERON:0002410!4.71e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.67e-27,73;UBERON:0001016,2.68e-26,75;UBERON:0004121,2.88e-22,95;UBERON:0000924,2.88e-22,95;UBERON:0006601,2.88e-22,95;UBERON:0002020,1.72e-20,34;UBERON:0002346,1.02e-18,64;UBERON:0003075,1.02e-18,64;UBERON:0007284,1.02e-18,64;UBERON:0002410,3.04e-16,9;UBERON:0010371,2.22e-15,73;UBERON:0001049,6.51e-15,52;UBERON:0005068,6.51e-15,52;UBERON:0006241,6.51e-15,52;UBERON:0007135,6.51e-15,52;UBERON:0000073,4.14e-14,54;UBERON:0003528,4.82e-14,29;UBERON:0002791,4.82e-14,29;UBERON:0001893,4.82e-14,29;UBERON:0000010,6.81e-13,11;UBERON:0003056,1.20e-12,49;UBERON:0003080,1.42e-12,40;UBERON:0002780,9.74e-12,39;UBERON:0001890,9.74e-12,39;UBERON:0006240,9.74e-12,39;UBERON:0010314,1.99e-11,92;UBERON:0002616,3.00e-10,46;UBERON:0000955,6.39e-10,47;UBERON:0006238,6.39e-10,47;UBERON:0000369,4.76e-09,5;UBERON:0002435,4.76e-09,5;UBERON:0000204,4.76e-09,5;UBERON:0010082,4.76e-09,5;UBERON:0001948,5.57e-09,5;UBERON:0002315,5.57e-09,5;UBERON:0000956,2.53e-08,21;UBERON:0001869,2.53e-08,21;UBERON:0000203,2.53e-08,21;UBERON:0002420,1.70e-07,8;UBERON:0007245,1.70e-07,8;UBERON:0010009,1.70e-07,8;UBERON:0010011,1.70e-07,8;UBERON:0000454,1.70e-07,8;UBERON:0002240,2.15e-07,6;UBERON:0005174,2.15e-07,6;UBERON:0001137,2.15e-07,6;UBERON:0000013,6.59e-07,3;UBERON:0010313,8.15e-07,3;UBERON:0002342,8.15e-07,3;UBERON:0002005,8.15e-07,3;UBERON:0005428,8.15e-07,3;UBERON:0005062,8.15e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,3.43937983461316,4.7609188134483,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,3.42175720617976,3.37514845829227,2.94454945891935,2.28520787523043,2.42955395046775,1.83736198822431,1.91690942036473,3.67687514644008,0,0.766124028511126,0.614426133024974,2.50583946687368,2.56165402086747,1.56274011167028,0.558365998002762,0.56276261003168,1.37518422999129,2.35702868378934,3.13217697758026,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.352766121407114,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,5.52879149296603,1.39059456153821,0.767146371990992,0.83115217823824,1.1356888414743,0.203678727700633,0,0,0,1.04096354370163,1.14951052216736,0.900310649026746,0.90422890701429,0.748401490664606,0.768682321709099,1.12442069471675,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,1.17263029990548,0,0.710234206755631,0,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0,0,3.36463917702604,5.9684675179985,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0.1668451057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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242259
|HGNC=
|MCL_coexpression_id=593
|TSSclassifier=NA
|UniProt=Q5RJI2
|association_with_transcript=55bp_to_ENSMUST00000089948,NM_001081263,uc008ruk.1_5end
|cluster_id=chr3:153636455..153636484,+
|description=CAGE_peak_2_at_Slc44a5_5end
|id=chr3:153636455..153636484,+
|ontology_enrichment_celltype=CL:0000540!2.92e-19!33;CL:0000047!2.92e-19!33;CL:0000031!2.92e-19!33;CL:0000404!2.92e-19!33;CL:0002319!4.16e-15!43;CL:0000221!2.24e-14!44;CL:0000133!2.24e-14!44;CL:0000393!8.29e-14!39;CL:0000211!8.29e-14!39;CL:0000117!1.53e-13!23;CL:0000337!1.53e-13!23;CL:0000055!1.06e-10!50;CL:0000107!4.71e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.97e-35,33;CL:0000047,1.97e-35,33;CL:0000031,1.97e-35,33;CL:0000404,1.97e-35,33;CL:0000393,9.36e-29,39;CL:0000211,9.36e-29,39;CL:0002319,1.99e-27,43;CL:0000221,1.28e-26,44;CL:0000133,1.28e-26,44;CL:0000117,7.14e-22,23;CL:0000337,7.14e-22,23;CL:0000107,3.04e-16,9;CL:0002321,8.80e-14,70;CL:0002609,4.65e-11,6;CL:0000723,4.77e-08,91;CL:0000048,4.77e-08,91;CL:0000034,3.97e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.67e-27,73;UBERON:0001016,2.68e-26,75;UBERON:0004121,2.88e-22,95;UBERON:0000924,2.88e-22,95;UBERON:0006601,2.88e-22,95;UBERON:0002020,1.72e-20,34;UBERON:0002346,1.02e-18,64;UBERON:0003075,1.02e-18,64;UBERON:0007284,1.02e-18,64;UBERON:0002410,3.04e-16,9;UBERON:0010371,2.22e-15,73;UBERON:0001049,6.51e-15,52;UBERON:0005068,6.51e-15,52;UBERON:0006241,6.51e-15,52;UBERON:0007135,6.51e-15,52;UBERON:0000073,4.14e-14,54;UBERON:0003528,4.82e-14,29;UBERON:0002791,4.82e-14,29;UBERON:0001893,4.82e-14,29;UBERON:0000010,6.81e-13,11;UBERON:0003056,1.20e-12,49;UBERON:0003080,1.42e-12,40;UBERON:0002780,9.74e-12,39;UBERON:0001890,9.74e-12,39;UBERON:0006240,9.74e-12,39;UBERON:0010314,1.99e-11,92;UBERON:0002616,3.00e-10,46;UBERON:0000955,6.39e-10,47;UBERON:0006238,6.39e-10,47;UBERON:0000369,4.76e-09,5;UBERON:0002435,4.76e-09,5;UBERON:0000204,4.76e-09,5;UBERON:0010082,4.76e-09,5;UBERON:0001948,5.57e-09,5;UBERON:0002315,5.57e-09,5;UBERON:0000956,2.53e-08,21;UBERON:0001869,2.53e-08,21;UBERON:0000203,2.53e-08,21;UBERON:0002420,1.70e-07,8;UBERON:0007245,1.70e-07,8;UBERON:0010009,1.70e-07,8;UBERON:0010011,1.70e-07,8;UBERON:0000454,1.70e-07,8;UBERON:0002240,2.15e-07,6;UBERON:0005174,2.15e-07,6;UBERON:0001137,2.15e-07,6;UBERON:0000013,6.59e-07,3;UBERON:0010313,8.15e-07,3;UBERON:0002342,8.15e-07,3;UBERON:0002005,8.15e-07,3;UBERON:0005428,8.15e-07,3;UBERON:0005062,8.15e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.0850432901510698,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,3.43937983461316,4.7609188134483,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,3.42175720617976,3.37514845829227,2.94454945891935,2.28520787523043,2.42955395046775,1.83736198822431,1.91690942036473,3.67687514644008,0,0.766124028511126,0.614426133024974,2.50583946687368,2.56165402086747,1.56274011167028,0.558365998002762,0.56276261003168,1.37518422999129,2.35702868378934,3.13217697758026,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.452167921657868,0.352766121407114,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,5.52879149296603,1.39059456153821,0.767146371990992,0.83115217823824,1.1356888414743,0.203678727700633,0,0,0,1.04096354370163,1.14951052216736,0.900310649026746,0.90422890701429,0.748401490664606,0.768682321709099,1.12442069471675,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,1.17263029990548,0,0.710234206755631,0,0,0,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0,0,3.36463917702604,5.9684675179985,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.586058432961016,0.163934945376675,0,3.78609863299508,3.51394869866975,5.38558494331997,1.19484398976276,1.78238939265915,2.54768877709949,3.64329631507405,7.59865230569411,3.95287777946523,0.642642632843614,0,1.78065603667255,0.81443479676788,0,0,0.485561272309963,0.302323556964751,0.188605079755898,1.18120757152309,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0.900305470156551,0.258717367565509,0.214337035031592,0.354680467284547,0.713475270408282,1.15184314421485,0.913394847343798,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0,1.20297227640581,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0,0.853668028770671,0.729320151204882,0.628839487883947,0.735374033800057,1.33348036680969,0.618105171716683,0.962757628775446,0,1.01391719956096,0.754505365544305,0.468207537349412,0.576226371643824,0.574354689556133,0,0.463537303779422,0.38581844092741,0,0.883193520806384,1.02860775715625,0.70990322463735,0,0.290692833264657,0.941093804153306,0.592302255241736,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,1.06771516311757,1.18205378850676,1.63692417267876,1.08455788830176,0.192906610981141,1.49886346762768,1.40358965067245,1.07435527024149,0.382576664137687,0,0.231867835620421
|short_description=p2@Slc44a5
}}

Latest revision as of 20:10, 1 October 2015

Short description:p2@Slc44a5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc44a5_5end
Coexpression cluster:MCL_coexpression_mm9:593
Association with transcript: 55bp_to_ENSMUST00000089948, NM_001081263, uc008ruk.1_5end
EntrezGene:Slc44a5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Slc44a5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.67e-2773
nervous system2.68e-2675
ectoderm-derived structure2.88e-2295
ectoderm2.88e-2295
presumptive ectoderm2.88e-2295
gray matter1.72e-2034
neurectoderm1.02e-1864
neural plate1.02e-1864
presumptive neural plate1.02e-1864
autonomic nervous system3.04e-169
ecto-epithelium2.22e-1573
neural tube6.51e-1552
neural rod6.51e-1552
future spinal cord6.51e-1552
neural keel6.51e-1552
regional part of nervous system4.14e-1454
brain grey matter4.82e-1429
regional part of telencephalon4.82e-1429
telencephalon4.82e-1429
peripheral nervous system6.81e-1311
pre-chordal neural plate1.20e-1249
anterior neural tube1.42e-1240
regional part of forebrain9.74e-1239
forebrain9.74e-1239
future forebrain9.74e-1239
structure with developmental contribution from neural crest1.99e-1192
regional part of brain3.00e-1046
brain6.39e-1047
future brain6.39e-1047
corpus striatum4.76e-095
striatum4.76e-095
ventral part of telencephalon4.76e-095
future corpus striatum4.76e-095
regional part of spinal cord5.57e-095
gray matter of spinal cord5.57e-095
cerebral cortex2.53e-0821
cerebral hemisphere2.53e-0821
pallium2.53e-0821
basal ganglion1.70e-078
nuclear complex of neuraxis1.70e-078
aggregate regional part of brain1.70e-078
collection of basal ganglia1.70e-078
cerebral subcortex1.70e-078
spinal cord2.15e-076
dorsal region element2.15e-076
dorsum2.15e-076
sympathetic nervous system6.59e-073
neural crest-derived structure8.15e-073
neural crest8.15e-073
enteric nervous system8.15e-073
vagal neural crest8.15e-073
neural fold8.15e-073
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