FFCP PHASE1:Mm9::chr10:67011490..67011541,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:67011490..67011541,-
|short_description=p3@Ado
|description=CAGE_peak_3_at_Ado_5end
|association_with_transcript=161bp_to_ENSMUST00000075686,NM_001005419,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=211488 | |EntrezGene=211488 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDY2 | |UniProt=Q6PDY2 | ||
|association_with_transcript=161bp_to_ENSMUST00000075686,NM_001005419,uc007flz.2_5end | |||
|cluster_id=chr10:67011490..67011541,- | |||
|description=CAGE_peak_3_at_Ado_5end | |||
|id=chr10:67011490..67011541,- | |||
|ontology_enrichment_celltype=CL:0000055!2.05e-10!50;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0002319!4.62e-08!43;CL:0000393!4.01e-07!39;CL:0000211!4.01e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.06e-10,44;CL:0000133,6.06e-10,44;CL:0002319,1.71e-09,43;CL:0000393,1.92e-08,39;CL:0000211,1.92e-08,39;CL:0002321,4.25e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.05e-11!75;UBERON:0001016!1.05e-11!75;UBERON:0001017!2.28e-11!73;UBERON:0005743!2.28e-11!73;UBERON:0004121!3.58e-09!102;UBERON:0000924!3.58e-09!102;UBERON:0006601!3.58e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.42e-13,75;UBERON:0001017,3.38e-13,73;UBERON:0004121,1.42e-10,95;UBERON:0000924,1.42e-10,95;UBERON:0006601,1.42e-10,95;UBERON:0000073,5.56e-08,54;UBERON:0001049,2.91e-07,52;UBERON:0005068,2.91e-07,52;UBERON:0006241,2.91e-07,52;UBERON:0007135,2.91e-07,52;UBERON:0002346,7.32e-07,64;UBERON:0003075,7.32e-07,64;UBERON:0007284,7.32e-07,64 | |||
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| ||
|short_description=p3@Ado | |||
}} | }} |
Latest revision as of 05:27, 26 September 2015
Short description: | p3@Ado |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ado_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 161bp_to_ENSMUST00000075686, NM_001005419, uc007flz.2_5end |
EntrezGene: | Ado |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.06e-10 | 44 |
neurectodermal cell | 6.06e-10 | 44 |
neural cell | 1.71e-09 | 43 |
electrically responsive cell | 1.92e-08 | 39 |
electrically active cell | 1.92e-08 | 39 |
embryonic cell | 4.25e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.42e-13 | 75 |
central nervous system | 3.38e-13 | 73 |
ectoderm-derived structure | 1.42e-10 | 95 |
ectoderm | 1.42e-10 | 95 |
presumptive ectoderm | 1.42e-10 | 95 |
regional part of nervous system | 5.56e-08 | 54 |
neural tube | 2.91e-07 | 52 |
neural rod | 2.91e-07 | 52 |
future spinal cord | 2.91e-07 | 52 |
neural keel | 2.91e-07 | 52 |
neurectoderm | 7.32e-07 | 64 |
neural plate | 7.32e-07 | 64 |
presumptive neural plate | 7.32e-07 | 64 |