FFCP PHASE1:Hg19::chr9:35650900..35650967,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27240 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17710 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y3P8 | |||
|association_with_transcript=0bp_to_ENST00000259608,ENST00000474403,NM_014450,uc003zxe.1,uc003zxf.1_5end | |||
|cluster_id=chr9:35650900..35650967,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_SIT1_5end | |||
|id=chr9:35650900..35650967,- | |||
|ontology_enrichment_celltype=CL:0000542!4.99e-46!53;CL:0000051!4.99e-46!53;CL:0000838!6.25e-45!52;CL:0000738!4.82e-31!140;CL:0002087!6.11e-28!119;CL:0000037!2.58e-23!172;CL:0000566!2.58e-23!172;CL:0002031!2.40e-22!124;CL:0000084!1.01e-21!25;CL:0000827!1.01e-21!25;CL:0000945!1.44e-21!24;CL:0000826!1.44e-21!24;CL:0000988!1.87e-20!182;CL:0002032!4.50e-20!165;CL:0000837!4.50e-20!165;CL:0000791!1.93e-18!18;CL:0000789!1.93e-18!18;CL:0002420!1.93e-18!18;CL:0002419!1.93e-18!18;CL:0000790!1.93e-18!18;CL:0000236!9.59e-15!14;CL:0000625!1.21e-12!11;CL:0000624!5.57e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.98e-36;53!CL:0000945;6.57e-33;24!CL:0000084;9.37e-27;25!CL:0000791;3.19e-25;18!CL:0000789;3.19e-25;18!CL:0002419;3.19e-25;18!CL:0000236;1.38e-20;13!CL:0000625;1.04e-18;11!CL:0002087;7.65e-12;104!CL:0000624;5.86e-10;6!CL:0000738;1.40e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.78e-64,53;CL:0000051,1.78e-64,53;CL:0000838,8.62e-63,52;CL:0002087,8.67e-36,115;CL:0000738,3.57e-35,136;CL:0000945,6.91e-33,24;CL:0000826,6.91e-33,24;CL:0002031,4.77e-28,120;CL:0000084,9.40e-27,25;CL:0000827,9.40e-27,25;CL:0000791,3.22e-25,18;CL:0000789,3.22e-25,18;CL:0002420,3.22e-25,18;CL:0002419,3.22e-25,18;CL:0000790,3.22e-25,18;CL:0000037,8.59e-25,168;CL:0000988,1.42e-22,177;CL:0000236,5.81e-22,14;CL:0002032,2.23e-20,161;CL:0000837,2.23e-20,161;CL:0000625,1.04e-18,11;CL:0000624,5.92e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000051;2.98e-36;53!CL:0000790;3.19e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.38e-12!115;UBERON:0000178!7.22e-09!15;UBERON:0000179!7.22e-09!15;UBERON:0000463!7.22e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.26e-13;15!UBERON:0000179;1.26e-13;15!UBERON:0000463;1.26e-13;15!UBERON:0002390;7.41e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-13,15;UBERON:0000179,1.24e-13,15;UBERON:0000463,1.24e-13,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7676644851845,11.7403842913422,10.4685339147193,1.57345710739562,0.767658796194425,0.619264493264304,0,0,0,75.8403893681153,29.2868618924088,0,1.10799081706375,2.20598892217156,1.95309783644267,3.13481663935894,7.12566065241755,2.57575567634187,0,0,0.242584061187816,0,0,0,0,0.768482119587302,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,1.0429658368404,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,51.0389108937836,55.1599997374753,61.3761385165853,73.8243285040057,66.0653378609421,41.9569281166773,60.1550834234225,44.8405264631621,5.69212969109448,7.04684627245127,9.17455747500549,0,1.12101712596307,0.526768169550154,14.3598132183098,11.3973121197258,21.9993603929475,116.696173782693,21.8367918644506,38.8227200702481,19.4826728407911,120.211882979102,49.1991865482978,63.5802277454993,51.1819302515879,132.958789875251,121.345371273366,123.492866357361,122.975757914703,108.676157150645,24.3189963585779,19.2629396224593,25.0885257131944,120.787759315606,47.5193412066382,66.6637244236302,29.6033039662818,84.7384002102097,69.0148461087804,90.2929442225955,67.3070782277644,53.2424302402381,64.9639778072198,74.3480571418213,87.0395676736309,11.4915843638097,13.6394499849589,10.7170058873271,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.982343066232845,0,0,0.324547393654683,0.348259474598534,0.664789802594326,15.7403812041526,19.4478269665243,17.4585025624896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.487894824518382,1.06023814657188,0.464775771478074,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,36.1999741520013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,5.71389204585589,9.70324086867828,4.87703537863044,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9248652538986,5.60856922128404,8.32474950866866,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,32.984094600091,28.2915766642679,21.6465931126182,25.967263524899,28.3839968429474,30.4782456260577,29.1616976108582,33.3112574043594,0,0,0,61.8724573168643,12.2628831029978,62.9605313633465,52.929522545969,0,0,0,0,0,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.996239941255349,24.8655523978033,0.251932747854276,0,30.7712013652674,0,0,0,0,1.08507746200627,7.18449277040819,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0,0,0,0,0,0,0.219385397153973,0,0,0.769502585037971,0,0,0,0,0.31900115973192,0,0,112.41262801531,0,0,0,0,0.167821586975843,0,0,0,0,0,0,1.99052386215701,1.68069372556344,4.888241159469,0,0,0,0.337005664903385,0.802577647298789,0,30.4699497990162,0,0,0.789168805698781,2.41981432097328,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,2.71569246167574,0,0,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.93817004549669,0,0,0,0,0,0,0.134366944973453,0,0,0.945398187686684,0.494495150286999,0.539228350833479,0,20.6602930240514,0,0,0.803765742325096,0.275078873194468,0.415440338029185,0,0,0,0,0.86686278029118,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0.13223260174269,0,0,1.9221734262185,0.157204305099666,2.07119527673598,16.8696447416063,0,24.2367270777983,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,7.82573554498456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.64477330057155,1.98484471355718,0,0,0,0,0,0,0.177404740325278,25.8124132124946,0,0,0.131545547125698,0,0,0.706437835654626,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,3.01159151174194,0,0,0.423387050190929,0,0,0,0,0.294450700845729,0,0,0.102662806856247,1.1598144313382,0,0.701818390386317,0,0,0,0,0,3.08696632431779,1.09279780251979,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,25.1876900186008,24.7518289818536,0,0,0,0,0,3.66983426723633,0.143339583151451,0,0.203974470572744,0,5.290268405154,0,0,0,0,0,0,0.101988829741982,0.801652215796681,0.0918948995348449,0,0.303114792872958,0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| |||
|short_description=p1@SIT1 | |||
}} |
Latest revision as of 07:57, 17 September 2015
Short description: | p1@SIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIT1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000259608, ENST00000474403, NM_014450, uc003zxe.1, uc003zxf.1_5end |
EntrezGene: | SIT1 |
HGNC: | 17710 |
UniProt: | Q9Y3P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.78e-64 | 53 |
common lymphoid progenitor | 1.78e-64 | 53 |
lymphoid lineage restricted progenitor cell | 8.62e-63 | 52 |
nongranular leukocyte | 8.67e-36 | 115 |
leukocyte | 3.57e-35 | 136 |
lymphocyte of B lineage | 6.91e-33 | 24 |
pro-B cell | 6.91e-33 | 24 |
hematopoietic lineage restricted progenitor cell | 4.77e-28 | 120 |
T cell | 9.40e-27 | 25 |
pro-T cell | 9.40e-27 | 25 |
mature alpha-beta T cell | 3.22e-25 | 18 |
alpha-beta T cell | 3.22e-25 | 18 |
immature T cell | 3.22e-25 | 18 |
mature T cell | 3.22e-25 | 18 |
immature alpha-beta T cell | 3.22e-25 | 18 |
hematopoietic stem cell | 8.59e-25 | 168 |
hematopoietic cell | 1.42e-22 | 177 |
B cell | 5.81e-22 | 14 |
hematopoietic oligopotent progenitor cell | 2.23e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.23e-20 | 161 |
CD8-positive, alpha-beta T cell | 1.04e-18 | 11 |
CD4-positive, alpha-beta T cell | 5.92e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.24e-13 | 15 |
haemolymphatic fluid | 1.24e-13 | 15 |
organism substance | 1.24e-13 | 15 |